FFCP PHASE1:Hg19::chr10:48439197..48439208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2662 | |EntrezGene=2662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4215 | |HGNC=4215 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_uc001jfb.2,uc009xnp.2,uc009xnq.1_5end | |association_with_transcript=-31bp_to_uc001jfb.2,uc009xnp.2,uc009xnq.1_5end | ||
|cluster_id=chr10:48439197..48439208,- | |||
|coexpression_cluster_id=C152 | |coexpression_cluster_id=C152 | ||
|description=CAGE_peak_3_at_GDF10_5end | |description=CAGE_peak_3_at_GDF10_5end | ||
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|ontology_enrichment_celltype=CL:0002603!5.99e-09!3;CL:0000064!6.51e-08!3;CL:0005012!6.51e-08!3;CL:0000067!6.51e-08!3;CL:0002304!6.51e-08!3 | |ontology_enrichment_celltype=CL:0002603!5.99e-09!3;CL:0000064!6.51e-08!3;CL:0005012!6.51e-08!3;CL:0000067!6.51e-08!3;CL:0002304!6.51e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002603;1.47e-30;3!CL:0000128;1.02e-13;7!CL:0000126;1.02e-13;7!CL:0000127;1.02e-13;7!CL:0000064;1.30e-08;3!CL:0000067;1.30e-08;3!CL:0005012;1.30e-08;3!CL:0002304;1.30e-08;3 | |ontology_enrichment_celltype_v019=CL:0002603;1.47e-30;3!CL:0000128;1.02e-13;7!CL:0000126;1.02e-13;7!CL:0000127;1.02e-13;7!CL:0000064;1.30e-08;3!CL:0000067;1.30e-08;3!CL:0005012;1.30e-08;3!CL:0002304;1.30e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.47e-30,3;CL:0000128,1.02e-13,7;CL:0000126,1.02e-13,7;CL:0000127,1.02e-13,7;CL:0002453,1.02e-13,7;CL:0000064,1.40e-08,3;CL:0000067,1.40e-08,3;CL:0005012,1.40e-08,3;CL:0002304,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.10e-23;1!UBERON:0006215;1.30e-08;3 | |ontology_enrichment_development_v019=UBERON:0010115;4.10e-23;1!UBERON:0006215;1.30e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;7.74e-10;10 | |ontology_enrichment_disease_v019=DOID:171;7.74e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,8.46e-10,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.05e-33;6!UBERON:0002363;4.10e-23;1!UBERON:0002346;4.60e-23;4!UBERON:0000923;4.60e-23;4!UBERON:0010316;4.60e-23;4!UBERON:0005291;4.60e-23;4!UBERON:0002680;9.35e-23;9!UBERON:0001895;9.35e-23;9!UBERON:0002050;1.13e-18;5!UBERON:0005423;1.13e-18;5!UBERON:0004733;2.91e-17;12!UBERON:0002028;2.91e-17;12!UBERON:0004732;5.42e-16;13!UBERON:0001905;2.07e-12;2!UBERON:0002757;2.07e-12;2!UBERON:0010134;2.07e-12;2!UBERON:0005408;2.07e-12;2!UBERON:0001899;2.07e-12;2!UBERON:0002360;2.90e-12;2!UBERON:0000094;2.90e-12;2!UBERON:0010743;2.90e-12;2!UBERON:0001778;1.30e-08;3!UBERON:0001775;1.30e-08;3!UBERON:0003296;7.69e-07;4!UBERON:0010133;7.69e-07;4!UBERON:0002784;7.69e-07;4!UBERON:0000488;9.10e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.05e-33;6!UBERON:0002363;4.10e-23;1!UBERON:0002346;4.60e-23;4!UBERON:0000923;4.60e-23;4!UBERON:0010316;4.60e-23;4!UBERON:0005291;4.60e-23;4!UBERON:0002680;9.35e-23;9!UBERON:0001895;9.35e-23;9!UBERON:0002050;1.13e-18;5!UBERON:0005423;1.13e-18;5!UBERON:0004733;2.91e-17;12!UBERON:0002028;2.91e-17;12!UBERON:0004732;5.42e-16;13!UBERON:0001905;2.07e-12;2!UBERON:0002757;2.07e-12;2!UBERON:0010134;2.07e-12;2!UBERON:0005408;2.07e-12;2!UBERON:0001899;2.07e-12;2!UBERON:0002360;2.90e-12;2!UBERON:0000094;2.90e-12;2!UBERON:0010743;2.90e-12;2!UBERON:0001778;1.30e-08;3!UBERON:0001775;1.30e-08;3!UBERON:0003296;7.69e-07;4!UBERON:0010133;7.69e-07;4!UBERON:0002784;7.69e-07;4!UBERON:0000488;9.10e-07;4 | ||
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| ||
|short_description=p3@GDF10 | |short_description=p3@GDF10 | ||
}} | }} |
Latest revision as of 08:28, 18 September 2015
Short description: | p3@GDF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDF10_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -31bp_to_uc001jfb.2, uc009xnp.2, uc009xnq.1_5end |
EntrezGene: | GDF10 |
HGNC: | 4215 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.47e-30 | 3 |
oligodendrocyte | 1.02e-13 | 7 |
macroglial cell | 1.02e-13 | 7 |
astrocyte | 1.02e-13 | 7 |
oligodendrocyte precursor cell | 1.02e-13 | 7 |
ciliated cell | 1.40e-08 | 3 |
ciliated epithelial cell | 1.40e-08 | 3 |
multi-ciliated epithelial cell | 1.40e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.46e-10 | 10 |