FFCP PHASE1:Hg19::chr20:44520009..44520020,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:44520009..44520020,+
|short_description=p2@CTSA
|description=CAGE_peak_2_at_CTSA_5end
|association_with_transcript=28bp_to_ENST00000419493_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5476 | |EntrezGene=5476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9251 | |HGNC=9251 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JZH0 | |UniProt=Q5JZH0 | ||
|association_with_transcript=28bp_to_ENST00000419493_5end | |||
|cluster_id=chr20:44520009..44520020,+ | |||
|description=CAGE_peak_2_at_CTSA_5end | |||
|id=chr20:44520009..44520020,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.73e-16!180;CL:0000222!5.46e-13!119;CL:0000048!1.06e-12!430;CL:0000144!1.34e-12!625;CL:0002371!2.33e-12!591;CL:0000183!1.68e-11!59;CL:0000723!3.36e-11!436;CL:0000192!6.12e-11!42;CL:0000514!6.12e-11!42;CL:0000680!1.06e-10!57;CL:0000056!1.06e-10!57;CL:0000355!1.06e-10!57;CL:0000548!1.25e-10!679;CL:0000004!1.25e-10!679;CL:0000255!1.25e-10!679;CL:0000012!1.31e-10!682;CL:0002194!1.58e-10!63;CL:0000576!1.58e-10!63;CL:0000040!1.58e-10!63;CL:0000559!1.58e-10!63;CL:0000034!4.09e-10!444;CL:0000187!6.72e-10!54;CL:0002009!2.88e-09!65;CL:0000766!9.85e-09!76;CL:0000839!3.92e-08!70;CL:0000003!6.11e-08!722;CL:0000860!6.15e-08!45;CL:0002057!6.24e-08!42;CL:0000557!9.56e-08!71;CL:0000057!1.14e-07!75;CL:0000359!1.19e-07!32;CL:0000393!2.64e-07!60;CL:0000211!2.64e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.47e-12;39!CL:0000234;3.47e-12;39!CL:0000860;2.49e-11;33!CL:0002057;2.49e-11;33!CL:0000192;2.26e-08;43!CL:0000359;2.10e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.38e-13,121;CL:0000048,1.26e-12,427;CL:0000192,2.84e-11,43;CL:0000514,2.84e-11,43;CL:0000723,3.78e-11,433;CL:0000680,5.12e-11,58;CL:0000056,5.12e-11,58;CL:0000355,5.12e-11,58;CL:0000473,1.40e-10,48;CL:0000234,1.40e-10,48;CL:0002194,1.71e-10,59;CL:0000576,1.71e-10,59;CL:0000040,1.71e-10,59;CL:0000559,1.71e-10,59;CL:0000187,3.27e-10,55;CL:0000034,4.60e-10,441;CL:0002009,3.29e-09,61;CL:0000766,1.30e-08,72;CL:0000839,5.14e-08,66;CL:0000860,6.20e-08,42;CL:0002057,6.20e-08,42;CL:0000057,1.02e-07,76;CL:0000359,1.18e-07,32;CL:0000557,1.23e-07,67;CL:0000393,1.40e-07,61;CL:0000211,1.40e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.26e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.59e-19!448;UBERON:0004120!9.59e-19!448;UBERON:0006603!9.59e-19!448;UBERON:0002204!5.19e-17!167;UBERON:0003081!1.22e-16!216;UBERON:0004535!3.00e-12!110;UBERON:0000480!1.28e-11!626;UBERON:0001009!1.32e-11!113;UBERON:0000467!2.26e-11!625;UBERON:0002193!1.09e-10!112;UBERON:0000468!1.10e-10!659;UBERON:0002405!1.28e-10!115;UBERON:0002390!2.55e-09!102;UBERON:0003061!2.55e-09!102;UBERON:0001474!6.85e-09!86;UBERON:0001134!1.11e-08!61;UBERON:0002036!1.11e-08!61;UBERON:0003082!1.11e-08!61;UBERON:0003914!1.31e-08!118;UBERON:0002371!1.34e-08!80;UBERON:0004765!2.74e-08!101;UBERON:0001434!2.74e-08!101;UBERON:0002385!2.83e-08!63;UBERON:0001015!2.83e-08!63;UBERON:0000383!2.83e-08!63;UBERON:0005256!4.13e-08!143;UBERON:0000923!6.24e-08!604;UBERON:0005291!6.24e-08!604;UBERON:0006598!6.24e-08!604;UBERON:0002532!6.24e-08!604;UBERON:0004290!7.69e-08!70;UBERON:0002049!1.01e-07!79;UBERON:0007798!1.01e-07!79;UBERON:0002050!1.10e-07!605;UBERON:0005423!1.10e-07!605;UBERON:0004872!1.77e-07!84;UBERON:0000490!1.84e-07!138;UBERON:0000055!2.39e-07!69;UBERON:0001637!2.66e-07!42;UBERON:0003509!2.66e-07!42;UBERON:0004572!2.66e-07!42;UBERON:0000914!5.14e-07!83;UBERON:0002329!5.14e-07!83;UBERON:0003077!5.14e-07!83;UBERON:0003059!5.14e-07!83;UBERON:0007282!5.14e-07!83;UBERON:0009618!5.14e-07!83;UBERON:0007285!5.14e-07!83;UBERON:0000486!7.14e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@CTSA | |||
}} | }} |
Latest revision as of 13:01, 16 September 2015
Short description: | p2@CTSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTSA_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000419493_5end |
EntrezGene: | CTSA |
HGNC: | 9251 |
UniProt: | Q5JZH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.38e-13 | 121 |
multi fate stem cell | 1.26e-12 | 427 |
smooth muscle cell | 2.84e-11 | 43 |
smooth muscle myoblast | 2.84e-11 | 43 |
somatic stem cell | 3.78e-11 | 433 |
muscle precursor cell | 5.12e-11 | 58 |
myoblast | 5.12e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.12e-11 | 58 |
defensive cell | 1.40e-10 | 48 |
phagocyte | 1.40e-10 | 48 |
monopoietic cell | 1.71e-10 | 59 |
monocyte | 1.71e-10 | 59 |
monoblast | 1.71e-10 | 59 |
promonocyte | 1.71e-10 | 59 |
muscle cell | 3.27e-10 | 55 |
stem cell | 4.60e-10 | 441 |
macrophage dendritic cell progenitor | 3.29e-09 | 61 |
myeloid leukocyte | 1.30e-08 | 72 |
myeloid lineage restricted progenitor cell | 5.14e-08 | 66 |
classical monocyte | 6.20e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.20e-08 | 42 |
fibroblast | 1.02e-07 | 76 |
vascular associated smooth muscle cell | 1.18e-07 | 32 |
granulocyte monocyte progenitor cell | 1.23e-07 | 67 |
electrically responsive cell | 1.40e-07 | 61 |
electrically active cell | 1.40e-07 | 61 |