FFCP PHASE1:Hg19::chr20:9495125..9495132,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:9495125..9495132,+
|short_description=p17@LAMP5
|description=CAGE_peak_17_at_LAMP5_5end
|association_with_transcript=117bp_to_ENST00000246070_5end
|Entre...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=117bp_to_ENST00000246070_5end | |||
|cluster_id=chr20:9495125..9495132,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_17_at_LAMP5_5end | |||
|id=chr20:9495125..9495132,+ | |||
|ontology_enrichment_celltype=CL:0000167!8.27e-07!1;CL:0000164!8.27e-07!1;CL:0000502!8.27e-07!1;CL:0000172!8.27e-07!1;CL:0000173!8.27e-07!1;CL:0002351!8.27e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.01e-57;2!UBERON:0006222;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:169!1.71e-08!6;DOID:4960!6.24e-07!1;DOID:0070004!6.24e-07!1;DOID:630!6.99e-07!1;DOID:0050177!6.99e-07!1;DOID:0050427!6.99e-07!1;DOID:4430!8.27e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.63e-33!57;UBERON:0005068!2.63e-33!57;UBERON:0006241!2.63e-33!57;UBERON:0007135!2.63e-33!57;UBERON:0002616!1.19e-28!59;UBERON:0000073!3.96e-27!94;UBERON:0001016!3.96e-27!94;UBERON:0001017!1.14e-26!82;UBERON:0000955!2.97e-26!69;UBERON:0006238!2.97e-26!69;UBERON:0002780!3.69e-26!41;UBERON:0001890!3.69e-26!41;UBERON:0006240!3.69e-26!41;UBERON:0003080!1.78e-25!42;UBERON:0001869!2.54e-25!32;UBERON:0005743!3.07e-25!86;UBERON:0002020!6.45e-24!34;UBERON:0003528!6.45e-24!34;UBERON:0001893!1.01e-23!34;UBERON:0000369!1.10e-23!4;UBERON:0002435!1.10e-23!4;UBERON:0000204!1.10e-23!4;UBERON:0010082!1.10e-23!4;UBERON:0003075!3.70e-23!86;UBERON:0007284!3.70e-23!86;UBERON:0002308!1.06e-22!9;UBERON:0000125!1.06e-22!9;UBERON:0002420!1.65e-22!9;UBERON:0007245!1.65e-22!9;UBERON:0010009!1.65e-22!9;UBERON:0010011!1.65e-22!9;UBERON:0000454!1.65e-22!9;UBERON:0002346!6.15e-22!90;UBERON:0002791!6.61e-21!33;UBERON:0009663!1.01e-20!7;UBERON:0005383!2.64e-18!3;UBERON:0005382!2.64e-18!3;UBERON:0007023!3.98e-18!115;UBERON:0003056!1.11e-16!61;UBERON:0000033!1.39e-14!123;UBERON:0000153!1.04e-13!129;UBERON:0007811!1.04e-13!129;UBERON:0004121!4.75e-13!169;UBERON:0001873!9.14e-13!2;UBERON:0010122!9.14e-13!2;UBERON:0000924!1.23e-12!173;UBERON:0006601!1.23e-12!173;UBERON:0002298!5.61e-11!8;UBERON:0002619!1.90e-10!22;UBERON:0000349!1.97e-10!5;UBERON:0000956!3.84e-09!25;UBERON:0000203!3.84e-09!25;UBERON:0003076!6.80e-09!15;UBERON:0003057!6.80e-09!15;UBERON:0001950!1.43e-08!20;UBERON:0000200!2.28e-08!6;UBERON:0000988!3.17e-08!3;UBERON:0001896!4.89e-08!3;UBERON:0005290!4.89e-08!3;UBERON:0010096!4.89e-08!3;UBERON:0004733!2.38e-07!12;UBERON:0002028!2.38e-07!12;UBERON:0007277!2.38e-07!12;UBERON:0001874!2.95e-07!1;UBERON:0001882!4.18e-07!1;UBERON:0005403!4.18e-07!1;UBERON:0000025!6.82e-07!194;UBERON:0004732!8.64e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;8.65e-113;4!UBERON:0002435;8.65e-113;4!UBERON:0000204;8.65e-113;4!UBERON:0009663;1.97e-100;7!UBERON:0005383;2.28e-85;3!UBERON:0005382;2.28e-85;3!UBERON:0002420;2.72e-78;9!UBERON:0000125;2.72e-78;9!UBERON:0007245;2.72e-78;9!UBERON:0002308;2.72e-78;9!UBERON:0010009;2.72e-78;9!UBERON:0010011;2.72e-78;9!UBERON:0000454;2.72e-78;9!UBERON:0001873;2.01e-57;2!UBERON:0001874;7.48e-30;1!UBERON:0001882;2.73e-29;1!UBERON:0005403;2.73e-29;1!UBERON:0002791;2.92e-22;32!UBERON:0001869;8.73e-21;32!UBERON:0003528;1.34e-20;34!UBERON:0002020;1.34e-20;34!UBERON:0002780;1.80e-19;41!UBERON:0001890;1.80e-19;41!UBERON:0001893;2.61e-18;34!UBERON:0001875;2.21e-15;2!UBERON:0006514;2.21e-15;2!UBERON:0000955;1.31e-12;68!UBERON:0000073;1.98e-11;53!UBERON:0002616;1.98e-11;53!UBERON:0001017;1.31e-10;75!UBERON:0001016;2.03e-07;83!UBERON:0000349;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.33e-112,4;UBERON:0002435,1.33e-112,4;UBERON:0000204,1.33e-112,4;UBERON:0010082,1.33e-112,4;UBERON:0009663,2.97e-100,7;UBERON:0005383,2.28e-85,3;UBERON:0005382,2.28e-85,3;UBERON:0002420,3.75e-78,9;UBERON:0000125,3.75e-78,9;UBERON:0007245,3.75e-78,9;UBERON:0002308,3.75e-78,9;UBERON:0010009,3.75e-78,9;UBERON:0010011,3.75e-78,9;UBERON:0000454,3.75e-78,9;UBERON:0001873,2.02e-57,2;UBERON:0010122,2.02e-57,2;UBERON:0001874,7.48e-30,1;UBERON:0001882,4.20e-29,1;UBERON:0005403,4.20e-29,1;UBERON:0002780,1.99e-24,41;UBERON:0001890,1.99e-24,41;UBERON:0003080,1.99e-24,41;UBERON:0006240,1.99e-24,41;UBERON:0002791,9.45e-22,32;UBERON:0001869,9.45e-22,32;UBERON:0003528,1.55e-20,34;UBERON:0002020,1.55e-20,34;UBERON:0001893,1.55e-20,34;UBERON:0000073,4.39e-19,53;UBERON:0002616,4.39e-19,53;UBERON:0001049,4.26e-18,56;UBERON:0005068,4.26e-18,56;UBERON:0006241,4.26e-18,56;UBERON:0007135,4.26e-18,56;UBERON:0003056,1.15e-16,61;UBERON:0001875,2.37e-15,2;UBERON:0006514,2.37e-15,2;UBERON:0000955,8.54e-15,68;UBERON:0006238,8.54e-15,68;UBERON:0001017,1.61e-12,81;UBERON:0003075,1.61e-12,82;UBERON:0007284,1.61e-12,82;UBERON:0002346,5.91e-12,86;UBERON:0001016,2.56e-11,89;UBERON:0010371,6.10e-10,104;UBERON:0007023,3.60e-09,114;UBERON:0010314,7.02e-08,132;UBERON:0000349,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,2.65722415744152,3.13550740426061,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.02766760154335,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,5.81327682689207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,2.65722415744152,3.13550740426061,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.02766760154335,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,5.81327682689207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p17@LAMP5 | |||
}} | }} |
Latest revision as of 17:29, 17 September 2015
Short description: | p17@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LAMP5_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 117bp_to_ENST00000246070_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data