FFCP PHASE1:Hg19::chr8:16425043..16425061,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4481 | |EntrezGene=4481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7376 | |HGNC=7376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000522130_5end | |association_with_transcript=-44bp_to_ENST00000522130_5end | ||
|cluster_id=chr8:16425043..16425061,- | |||
|coexpression_cluster_id=C1515 | |coexpression_cluster_id=C1515 | ||
|description=CAGE_peak_5_at_MSR1_5end | |description=CAGE_peak_5_at_MSR1_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.16e-65!24;CL:0000115!1.18e-56!35;CL:0000071!1.23e-45!18;CL:0002546!1.23e-45!18;CL:0002078!1.19e-43!44;CL:0000213!3.94e-32!57;CL:0000215!3.94e-32!57;CL:1000413!2.20e-29!9;CL:0005020!1.17e-21!6;CL:0002138!1.17e-21!6;CL:0005022!1.17e-21!6;CL:0002544!6.17e-20!6;CL:0000222!4.45e-17!119;CL:0000076!5.73e-12!62;CL:0002144!9.10e-12!3;CL:0002543!2.33e-09!6;CL:0000666!1.33e-08!4;CL:0002188!1.33e-08!4;CL:1000612!3.90e-08!7;CL:1000746!3.90e-08!7;CL:0002545!4.09e-08!2;CL:0000220!4.44e-07!246;CL:0002321!5.79e-07!248 | |ontology_enrichment_celltype=CL:0002139!1.16e-65!24;CL:0000115!1.18e-56!35;CL:0000071!1.23e-45!18;CL:0002546!1.23e-45!18;CL:0002078!1.19e-43!44;CL:0000213!3.94e-32!57;CL:0000215!3.94e-32!57;CL:1000413!2.20e-29!9;CL:0005020!1.17e-21!6;CL:0002138!1.17e-21!6;CL:0005022!1.17e-21!6;CL:0002544!6.17e-20!6;CL:0000222!4.45e-17!119;CL:0000076!5.73e-12!62;CL:0002144!9.10e-12!3;CL:0002543!2.33e-09!6;CL:0000666!1.33e-08!4;CL:0002188!1.33e-08!4;CL:1000612!3.90e-08!7;CL:1000746!3.90e-08!7;CL:0002545!4.09e-08!2;CL:0000220!4.44e-07!246;CL:0002321!5.79e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.97e-54;24!CL:0002138;4.37e-48;6!CL:0000115;9.60e-44;36!CL:0002078;4.59e-32;45!CL:0002144;4.20e-25;3!CL:0000071;5.24e-21;18!CL:0000213;1.23e-20;58!CL:0000215;1.23e-20;58!CL:0002188;6.82e-15;5!CL:0002573;3.79e-12;2!CL:1000746;8.52e-11;7!CL:1000612;8.52e-11;7!CL:0000222;2.16e-09;1!CL:1000413;1.70e-08;9 | |ontology_enrichment_celltype_v019=CL:0002139;3.97e-54;24!CL:0002138;4.37e-48;6!CL:0000115;9.60e-44;36!CL:0002078;4.59e-32;45!CL:0002144;4.20e-25;3!CL:0000071;5.24e-21;18!CL:0000213;1.23e-20;58!CL:0000215;1.23e-20;58!CL:0002188;6.82e-15;5!CL:0002573;3.79e-12;2!CL:1000746;8.52e-11;7!CL:1000612;8.52e-11;7!CL:0000222;2.16e-09;1!CL:1000413;1.70e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.81e-54,24;CL:0000115,5.98e-54,36;CL:0005020,4.56e-48,6;CL:0002138,4.56e-48,6;CL:0005022,4.56e-48,6;CL:0002078,1.30e-42,45;CL:0000213,1.94e-32,58;CL:0000215,1.94e-32,58;CL:0002144,4.21e-25,3;CL:0000071,4.05e-21,18;CL:0002546,4.05e-21,18;CL:0000222,4.36e-16,121;CL:0002188,9.98e-15,5;CL:0002573,3.69e-12,2;CL:1000746,1.12e-10,7;CL:1000612,1.12e-10,7;CL:1000413,1.53e-08,9;CL:0002321,3.67e-08,250;CL:0000076,4.10e-07,63;CL:0000066,4.93e-07,253 | |||
|ontology_enrichment_development_v019=CL:0005022;4.37e-48;6!CL:0002546;5.24e-21;18 | |ontology_enrichment_development_v019=CL:0005022;4.37e-48;6!CL:0002546;5.24e-21;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;3.98e-09;1!DOID:3165;3.98e-09;1!DOID:0060121;3.98e-09;1!DOID:2438;3.98e-09;1!DOID:4418;3.98e-09;1 | |ontology_enrichment_disease_v019=DOID:0060085;3.98e-09;1!DOID:3165;3.98e-09;1!DOID:0060121;3.98e-09;1!DOID:2438;3.98e-09;1!DOID:4418;3.98e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.00e-09,1;DOID:3165,3.00e-09,1;DOID:0060121,3.00e-09,1;DOID:2438,3.00e-09,1;DOID:4418,3.00e-09,1 | |||
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|short_description=p5@MSR1 | |short_description=p5@MSR1 | ||
}} | }} |
Latest revision as of 03:31, 17 September 2015
Short description: | p5@MSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MSR1_5end |
Coexpression cluster: | C1515_Endothelial_schwannoma_Renal_cerebellum_lung_heart_diaphragm |
Association with transcript: | -44bp_to_ENST00000522130_5end |
EntrezGene: | MSR1 |
HGNC: | 7376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.81e-54 | 24 |
endothelial cell | 5.98e-54 | 36 |
lymphangioblast | 4.56e-48 | 6 |
endothelial cell of lymphatic vessel | 4.56e-48 | 6 |
vascular lymphangioblast | 4.56e-48 | 6 |
meso-epithelial cell | 1.30e-42 | 45 |
lining cell | 1.94e-32 | 58 |
barrier cell | 1.94e-32 | 58 |
capillary endothelial cell | 4.21e-25 | 3 |
blood vessel endothelial cell | 4.05e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.05e-21 | 18 |
mesodermal cell | 4.36e-16 | 121 |
glomerular endothelial cell | 9.98e-15 | 5 |
Schwann cell | 3.69e-12 | 2 |
glomerular cell | 1.12e-10 | 7 |
kidney corpuscule cell | 1.12e-10 | 7 |
endothelial cell of artery | 1.53e-08 | 9 |
embryonic cell | 3.67e-08 | 250 |
squamous epithelial cell | 4.10e-07 | 63 |
epithelial cell | 4.93e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.00e-09 | 1 |
skin benign neoplasm | 3.00e-09 | 1 |
integumentary system benign neoplasm | 3.00e-09 | 1 |
dermis tumor | 3.00e-09 | 1 |
cutaneous fibrous histiocytoma | 3.00e-09 | 1 |