FFCP PHASE1:Hg19::chr21:47476500..47476508,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:47476500..47476508,-
|short_description=p@chr21:47476500..47476508,-
|description=CAGE_peak_at_chr21:47476500..47476508,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47476500..47476508,- | |||
|description=CAGE_peak_at_chr21:47476500..47476508,- | |||
|id=chr21:47476500..47476508,- | |||
|ontology_enrichment_celltype=CL:0000055!4.00e-34!180;CL:0000057!1.52e-24!75;CL:0000680!3.06e-20!57;CL:0000056!3.06e-20!57;CL:0000355!3.06e-20!57;CL:0000187!1.40e-19!54;CL:0000048!3.95e-17!430;CL:0000183!7.71e-17!59;CL:0000393!2.38e-16!60;CL:0000211!2.38e-16!60;CL:0000723!2.43e-16!436;CL:0000034!2.50e-15!444;CL:0000192!4.56e-15!42;CL:0000514!4.56e-15!42;CL:0000359!1.36e-14!32;CL:0002620!5.31e-11!23;CL:0002494!9.48e-11!16;CL:0000188!5.62e-07!9;CL:0002556!9.57e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000346;3.42e-14;3!CL:1000428;3.42e-14;3!CL:0000359;1.16e-13;32!CL:0002570;1.66e-13;8!CL:0000134;1.63e-12;55!CL:0000048;3.97e-11;58!CL:0000723;1.28e-10;61!CL:0002594;2.54e-10;4!CL:0002596;2.75e-10;2!CL:0000192;1.37e-09;43!CL:0002559;1.09e-08;5!CL:0000034;8.57e-08;69!CL:0002540;5.09e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.78e-14,32;CL:0000346,2.77e-14,3;CL:1000428,2.77e-14,3;CL:0002570,2.29e-13,8;CL:0000048,1.12e-12,427;CL:0000723,2.26e-12,433;CL:0000192,3.31e-12,43;CL:0000514,3.31e-12,43;CL:0000034,5.54e-12,441;CL:0000187,1.14e-10,55;CL:0002594,2.25e-10,4;CL:0002596,3.32e-10,2;CL:0000680,5.64e-10,58;CL:0000056,5.64e-10,58;CL:0000355,5.64e-10,58;CL:0000393,2.38e-09,61;CL:0000211,2.38e-09,61;CL:0002559,9.61e-09,5;CL:0002540,2.60e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.37e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.08e-25!83;UBERON:0002329!1.08e-25!83;UBERON:0003077!1.08e-25!83;UBERON:0003059!1.08e-25!83;UBERON:0007282!1.08e-25!83;UBERON:0009618!1.08e-25!83;UBERON:0007285!1.08e-25!83;UBERON:0004290!4.93e-21!70;UBERON:0002385!5.21e-19!63;UBERON:0001015!5.21e-19!63;UBERON:0000383!5.21e-19!63;UBERON:0001134!4.95e-18!61;UBERON:0002036!4.95e-18!61;UBERON:0003082!4.95e-18!61;UBERON:0000486!6.25e-18!82;UBERON:0004872!4.54e-14!84;UBERON:0001637!9.52e-14!42;UBERON:0003509!9.52e-14!42;UBERON:0004572!9.52e-14!42;UBERON:0005256!7.06e-13!143;UBERON:0004573!7.40e-12!33;UBERON:0004571!7.40e-12!33;UBERON:0003102!3.60e-11!95;UBERON:0002100!2.45e-09!216;UBERON:0000948!3.74e-09!24;UBERON:0005498!3.74e-09!24;UBERON:0004140!3.74e-09!24;UBERON:0009881!3.74e-09!24;UBERON:0004141!3.74e-09!24;UBERON:0003084!3.74e-09!24;UBERON:0007005!3.74e-09!24;UBERON:0004139!3.74e-09!24;UBERON:0004291!3.74e-09!24;UBERON:0002199!5.08e-09!45;UBERON:0002416!5.08e-09!45;UBERON:0007100!7.79e-09!27;UBERON:0001981!1.39e-08!60;UBERON:0007500!1.39e-08!60;UBERON:0004537!1.39e-08!60;UBERON:0006965!1.39e-08!60;UBERON:0001009!3.59e-08!113;UBERON:0004535!4.47e-08!110;UBERON:0000475!6.66e-08!365;UBERON:0000055!7.46e-08!69;UBERON:0001013!1.46e-07!14;UBERON:0002097!6.19e-07!40;UBERON:0002049!7.31e-07!79;UBERON:0007798!7.31e-07!79;UBERON:0000481!8.38e-07!347;UBERON:0001758!9.57e-07!6;UBERON:0003672!9.57e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.11e-14;14!UBERON:0000412;3.42e-14;3!UBERON:0001992;3.42e-14;3!UBERON:0001310;2.54e-10;4!UBERON:0005396;2.75e-10;2!UBERON:0002073;1.09e-08;5!UBERON:0001637;3.01e-08;42!UBERON:0003509;3.01e-08;42!UBERON:0004572;3.01e-08;42!UBERON:0004573;8.13e-07;33!UBERON:0004571;8.13e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.77e-14,3;UBERON:0001992,2.77e-14,3;UBERON:0001013,4.83e-14,14;UBERON:0007524,1.86e-13,73;UBERON:0001637,1.56e-12,42;UBERON:0003509,1.56e-12,42;UBERON:0004572,1.56e-12,42;UBERON:0002329,3.32e-12,71;UBERON:0003059,3.32e-12,71;UBERON:0007282,3.32e-12,71;UBERON:0004290,3.32e-12,71;UBERON:0009618,3.32e-12,71;UBERON:0003077,5.51e-12,72;UBERON:0007285,5.51e-12,72;UBERON:0000486,2.60e-11,83;UBERON:0007503,8.73e-11,78;UBERON:0001310,2.25e-10,4;UBERON:0005396,3.32e-10,2;UBERON:0001134,3.73e-09,62;UBERON:0002036,3.73e-09,62;UBERON:0003082,3.73e-09,62;UBERON:0002385,8.76e-09,64;UBERON:0001015,8.76e-09,64;UBERON:0000383,8.76e-09,64;UBERON:0002073,9.61e-09,5;UBERON:0005086,9.61e-09,5;UBERON:0004872,1.33e-08,83;UBERON:0007500,3.30e-08,59;UBERON:0001981,3.30e-08,59;UBERON:0004537,3.30e-08,59;UBERON:0006965,3.30e-08,59;UBERON:0004573,2.20e-07,33;UBERON:0004571,2.20e-07,33;UBERON:0000055,8.29e-07,68 | |||
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| ||
|short_description=p@chr21:47476500..47476508,- | |||
}} | }} |
Latest revision as of 18:45, 28 July 2015
Short description: | p@chr21:47476500..47476508, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47476500..47476508, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.78e-14 | 32 |
hair follicle dermal papilla cell | 2.77e-14 | 3 |
stem cell of epidermis | 2.77e-14 | 3 |
mesenchymal stem cell of adipose | 2.29e-13 | 8 |
multi fate stem cell | 1.12e-12 | 427 |
somatic stem cell | 2.26e-12 | 433 |
smooth muscle cell | 3.31e-12 | 43 |
smooth muscle myoblast | 3.31e-12 | 43 |
stem cell | 5.54e-12 | 441 |
muscle cell | 1.14e-10 | 55 |
smooth muscle cell of the umbilical artery | 2.25e-10 | 4 |
smooth muscle cell of the carotid artery | 3.32e-10 | 2 |
muscle precursor cell | 5.64e-10 | 58 |
myoblast | 5.64e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.64e-10 | 58 |
electrically responsive cell | 2.38e-09 | 61 |
electrically active cell | 2.38e-09 | 61 |
hair follicle cell | 9.61e-09 | 5 |
mesenchymal stem cell of the bone marrow | 2.60e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.77e-14 | 3 |
papillary layer of dermis | 2.77e-14 | 3 |
adipose tissue | 4.83e-14 | 14 |
dense mesenchyme tissue | 1.86e-13 | 73 |
artery | 1.56e-12 | 42 |
arterial blood vessel | 1.56e-12 | 42 |
arterial system | 1.56e-12 | 42 |
somite | 3.32e-12 | 71 |
presomitic mesoderm | 3.32e-12 | 71 |
presumptive segmental plate | 3.32e-12 | 71 |
dermomyotome | 3.32e-12 | 71 |
trunk paraxial mesoderm | 3.32e-12 | 71 |
paraxial mesoderm | 5.51e-12 | 72 |
presumptive paraxial mesoderm | 5.51e-12 | 72 |
multilaminar epithelium | 2.60e-11 | 83 |
epithelial vesicle | 8.73e-11 | 78 |
umbilical artery | 2.25e-10 | 4 |
carotid artery segment | 3.32e-10 | 2 |
skeletal muscle tissue | 3.73e-09 | 62 |
striated muscle tissue | 3.73e-09 | 62 |
myotome | 3.73e-09 | 62 |
muscle tissue | 8.76e-09 | 64 |
musculature | 8.76e-09 | 64 |
musculature of body | 8.76e-09 | 64 |
hair follicle | 9.61e-09 | 5 |
hair follicle placode | 9.61e-09 | 5 |
splanchnic layer of lateral plate mesoderm | 1.33e-08 | 83 |
epithelial tube open at both ends | 3.30e-08 | 59 |
blood vessel | 3.30e-08 | 59 |
blood vasculature | 3.30e-08 | 59 |
vascular cord | 3.30e-08 | 59 |
systemic artery | 2.20e-07 | 33 |
systemic arterial system | 2.20e-07 | 33 |
vessel | 8.29e-07 | 68 |