FFCP PHASE1:Hg19::chr20:30102234..30102322,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81502 | |EntrezGene=81502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16435 | |HGNC=16435 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCT9 | |UniProt=Q8TCT9 | ||
|association_with_transcript=0bp_to_ENST00000376127,ENST00000496438,ENST00000498035,NM_030789,NM_178580,NM_178581,NM_178582,uc002wwb.1,uc002wwc.2,uc002wwd.2,uc002wwe.2_5end | |association_with_transcript=0bp_to_ENST00000376127,ENST00000496438,ENST00000498035,NM_030789,NM_178580,NM_178581,NM_178582,uc002wwb.1,uc002wwc.2,uc002wwd.2,uc002wwe.2_5end | ||
|cluster_id=chr20:30102234..30102322,+ | |||
|description=CAGE_peak_1_at_HM13_5end | |description=CAGE_peak_1_at_HM13_5end | ||
|id=chr20:30102234..30102322,+ | |id=chr20:30102234..30102322,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.48e-26!679;CL:0000004!3.48e-26!679;CL:0000255!3.48e-26!679;CL:0000012!3.24e-25!682;CL:0000144!5.85e-25!625;CL:0002371!1.30e-23!591;CL:0002194!1.51e-16!63;CL:0000576!1.51e-16!63;CL:0000040!1.51e-16!63;CL:0000559!1.51e-16!63;CL:0000055!7.79e-15!180;CL:0002009!1.08e-14!65;CL:0000063!1.66e-14!578;CL:0002057!2.22e-14!42;CL:0000860!2.25e-13!45;CL:0000222!5.81e-13!119;CL:0000003!8.90e-13!722;CL:0000839!2.44e-12!70;CL:0000766!2.93e-12!76;CL:0000220!3.45e-12!246;CL:0000557!3.55e-12!71;CL:0000048!3.88e-12!430;CL:0002321!1.11e-11!248;CL:0000723!2.03e-11!436;CL:0000057!3.74e-10!75;CL:0000034!4.88e-10!444;CL:0000192!5.22e-09!42;CL:0000514!5.22e-09!42;CL:0000183!1.36e-08!59;CL:0000359!1.78e-08!32;CL:0000680!7.84e-08!57;CL:0000056!7.84e-08!57;CL:0000355!7.84e-08!57;CL:0000187!2.28e-07!54;CL:0002320!2.61e-07!365 | |ontology_enrichment_celltype=CL:0000548!3.48e-26!679;CL:0000004!3.48e-26!679;CL:0000255!3.48e-26!679;CL:0000012!3.24e-25!682;CL:0000144!5.85e-25!625;CL:0002371!1.30e-23!591;CL:0002194!1.51e-16!63;CL:0000576!1.51e-16!63;CL:0000040!1.51e-16!63;CL:0000559!1.51e-16!63;CL:0000055!7.79e-15!180;CL:0002009!1.08e-14!65;CL:0000063!1.66e-14!578;CL:0002057!2.22e-14!42;CL:0000860!2.25e-13!45;CL:0000222!5.81e-13!119;CL:0000003!8.90e-13!722;CL:0000839!2.44e-12!70;CL:0000766!2.93e-12!76;CL:0000220!3.45e-12!246;CL:0000557!3.55e-12!71;CL:0000048!3.88e-12!430;CL:0002321!1.11e-11!248;CL:0000723!2.03e-11!436;CL:0000057!3.74e-10!75;CL:0000034!4.88e-10!444;CL:0000192!5.22e-09!42;CL:0000514!5.22e-09!42;CL:0000183!1.36e-08!59;CL:0000359!1.78e-08!32;CL:0000680!7.84e-08!57;CL:0000056!7.84e-08!57;CL:0000355!7.84e-08!57;CL:0000187!2.28e-07!54;CL:0002320!2.61e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.32e-15;39!CL:0000234;2.32e-15;39!CL:0000860;1.12e-14;33!CL:0002057;1.12e-14;33!CL:0000576;4.62e-09;48!CL:0000359;3.84e-08;32!CL:0000192;6.77e-07;43 | |ontology_enrichment_celltype_v019=CL:0000473;2.32e-15;39!CL:0000234;2.32e-15;39!CL:0000860;1.12e-14;33!CL:0002057;1.12e-14;33!CL:0000576;4.62e-09;48!CL:0000359;3.84e-08;32!CL:0000192;6.77e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.43e-18,48;CL:0000234,6.43e-18,48;CL:0002194,4.43e-17,59;CL:0000576,4.43e-17,59;CL:0000040,4.43e-17,59;CL:0000559,4.43e-17,59;CL:0002009,4.08e-15,61;CL:0000860,2.22e-14,42;CL:0002057,2.22e-14,42;CL:0000222,5.06e-13,121;CL:0000839,1.29e-12,66;CL:0000766,1.71e-12,72;CL:0000557,1.94e-12,67;CL:0000048,3.75e-12,427;CL:0002321,8.62e-12,250;CL:0000723,1.97e-11,433;CL:0000057,1.92e-10,76;CL:0000034,4.79e-10,441;CL:0000192,6.53e-09,43;CL:0000514,6.53e-09,43;CL:0000359,1.78e-08,32;CL:0000680,8.74e-08,58;CL:0000056,8.74e-08,58;CL:0000355,8.74e-08,58;CL:0000187,2.53e-07,55;CL:0002320,2.60e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.03e-11;42!CL:0000514;6.77e-07;43 | |ontology_enrichment_development_v019=CL:0002057;6.03e-11;42!CL:0000514;6.77e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.82e-24!448;UBERON:0004120!6.82e-24!448;UBERON:0006603!6.82e-24!448;UBERON:0002204!1.17e-18!167;UBERON:0003081!1.39e-17!216;UBERON:0002371!3.71e-13!80;UBERON:0002405!4.71e-13!115;UBERON:0003914!5.97e-13!118;UBERON:0001474!1.21e-12!86;UBERON:0004765!3.70e-12!101;UBERON:0001434!3.70e-12!101;UBERON:0005256!1.94e-11!143;UBERON:0000468!6.23e-11!659;UBERON:0000480!9.36e-11!626;UBERON:0000467!1.98e-10!625;UBERON:0002100!2.01e-10!216;UBERON:0001637!7.84e-10!42;UBERON:0003509!7.84e-10!42;UBERON:0004572!7.84e-10!42;UBERON:0004573!1.75e-08!33;UBERON:0004571!1.75e-08!33;UBERON:0000490!2.04e-08!138;UBERON:0009569!1.04e-07!113;UBERON:0000923!1.38e-07!604;UBERON:0005291!1.38e-07!604;UBERON:0006598!1.38e-07!604;UBERON:0002532!1.38e-07!604;UBERON:0000055!1.39e-07!69;UBERON:0002050!1.75e-07!605;UBERON:0005423!1.75e-07!605;UBERON:0000486!1.97e-07!82;UBERON:0002049!2.16e-07!79;UBERON:0007798!2.16e-07!79;UBERON:0002193!3.36e-07!112;UBERON:0004872!3.45e-07!84;UBERON:0002384!3.82e-07!375;UBERON:0004290!4.40e-07!70;UBERON:0001981!4.82e-07!60;UBERON:0007500!4.82e-07!60;UBERON:0004537!4.82e-07!60;UBERON:0006965!4.82e-07!60;UBERON:0002390!7.21e-07!102;UBERON:0003061!7.21e-07!102;UBERON:0000914!8.57e-07!83;UBERON:0002329!8.57e-07!83;UBERON:0003077!8.57e-07!83;UBERON:0003059!8.57e-07!83;UBERON:0007282!8.57e-07!83;UBERON:0009618!8.57e-07!83;UBERON:0007285!8.57e-07!83 | |ontology_enrichment_uberon=UBERON:0000926!6.82e-24!448;UBERON:0004120!6.82e-24!448;UBERON:0006603!6.82e-24!448;UBERON:0002204!1.17e-18!167;UBERON:0003081!1.39e-17!216;UBERON:0002371!3.71e-13!80;UBERON:0002405!4.71e-13!115;UBERON:0003914!5.97e-13!118;UBERON:0001474!1.21e-12!86;UBERON:0004765!3.70e-12!101;UBERON:0001434!3.70e-12!101;UBERON:0005256!1.94e-11!143;UBERON:0000468!6.23e-11!659;UBERON:0000480!9.36e-11!626;UBERON:0000467!1.98e-10!625;UBERON:0002100!2.01e-10!216;UBERON:0001637!7.84e-10!42;UBERON:0003509!7.84e-10!42;UBERON:0004572!7.84e-10!42;UBERON:0004573!1.75e-08!33;UBERON:0004571!1.75e-08!33;UBERON:0000490!2.04e-08!138;UBERON:0009569!1.04e-07!113;UBERON:0000923!1.38e-07!604;UBERON:0005291!1.38e-07!604;UBERON:0006598!1.38e-07!604;UBERON:0002532!1.38e-07!604;UBERON:0000055!1.39e-07!69;UBERON:0002050!1.75e-07!605;UBERON:0005423!1.75e-07!605;UBERON:0000486!1.97e-07!82;UBERON:0002049!2.16e-07!79;UBERON:0007798!2.16e-07!79;UBERON:0002193!3.36e-07!112;UBERON:0004872!3.45e-07!84;UBERON:0002384!3.82e-07!375;UBERON:0004290!4.40e-07!70;UBERON:0001981!4.82e-07!60;UBERON:0007500!4.82e-07!60;UBERON:0004537!4.82e-07!60;UBERON:0006965!4.82e-07!60;UBERON:0002390!7.21e-07!102;UBERON:0003061!7.21e-07!102;UBERON:0000914!8.57e-07!83;UBERON:0002329!8.57e-07!83;UBERON:0003077!8.57e-07!83;UBERON:0003059!8.57e-07!83;UBERON:0007282!8.57e-07!83;UBERON:0009618!8.57e-07!83;UBERON:0007285!8.57e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.50e-08;33!UBERON:0004571;8.50e-08;33!UBERON:0001637;1.12e-07;42!UBERON:0003509;1.12e-07;42!UBERON:0004572;1.12e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;8.50e-08;33!UBERON:0004571;8.50e-08;33!UBERON:0001637;1.12e-07;42!UBERON:0003509;1.12e-07;42!UBERON:0004572;1.12e-07;42 | ||
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| ||
|short_description=p1@HM13 | |short_description=p1@HM13 | ||
}} | }} |
Latest revision as of 00:27, 25 September 2015
Short description: | p1@HM13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HM13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376127, ENST00000496438, ENST00000498035, NM_030789, NM_178580, NM_178581, NM_178582, uc002wwb.1, uc002wwc.2, uc002wwd.2, uc002wwe.2_5end |
EntrezGene: | HM13 |
HGNC: | 16435 |
UniProt: | Q8TCT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.43e-18 | 48 |
phagocyte | 6.43e-18 | 48 |
monopoietic cell | 4.43e-17 | 59 |
monocyte | 4.43e-17 | 59 |
monoblast | 4.43e-17 | 59 |
promonocyte | 4.43e-17 | 59 |
macrophage dendritic cell progenitor | 4.08e-15 | 61 |
classical monocyte | 2.22e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-14 | 42 |
mesodermal cell | 5.06e-13 | 121 |
myeloid lineage restricted progenitor cell | 1.29e-12 | 66 |
myeloid leukocyte | 1.71e-12 | 72 |
granulocyte monocyte progenitor cell | 1.94e-12 | 67 |
multi fate stem cell | 3.75e-12 | 427 |
embryonic cell | 8.62e-12 | 250 |
somatic stem cell | 1.97e-11 | 433 |
fibroblast | 1.92e-10 | 76 |
stem cell | 4.79e-10 | 441 |
smooth muscle cell | 6.53e-09 | 43 |
smooth muscle myoblast | 6.53e-09 | 43 |
vascular associated smooth muscle cell | 1.78e-08 | 32 |
muscle precursor cell | 8.74e-08 | 58 |
myoblast | 8.74e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.74e-08 | 58 |
muscle cell | 2.53e-07 | 55 |
connective tissue cell | 2.60e-07 | 361 |