FFCP PHASE1:Hg19::chr2:156381975..156381997,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:156381975..156381997,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_at_chr2:156381975..156381997,+ | |description=CAGE_peak_at_chr2:156381975..156381997,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;1.78e-15;2!DOID:4236;1.78e-15;2 | |ontology_enrichment_disease_v019=DOID:154;1.78e-15;2!DOID:4236;1.78e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:154,1.78e-15,2;DOID:4236,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0004733!1.37e-38!12;UBERON:0002028!1.37e-38!12;UBERON:0007277!1.37e-38!12;UBERON:0004732!1.41e-35!13;UBERON:0003076!9.27e-31!15;UBERON:0003057!9.27e-31!15;UBERON:0002680!8.61e-27!9;UBERON:0001895!8.61e-27!9;UBERON:0010092!8.61e-27!9;UBERON:0000955!6.08e-24!69;UBERON:0006238!6.08e-24!69;UBERON:0001017!4.64e-23!82;UBERON:0005743!6.62e-22!86;UBERON:0000073!1.18e-19!94;UBERON:0001016!1.18e-19!94;UBERON:0002298!3.42e-19!8;UBERON:0001049!3.37e-18!57;UBERON:0005068!3.37e-18!57;UBERON:0006241!3.37e-18!57;UBERON:0007135!3.37e-18!57;UBERON:0002616!1.55e-17!59;UBERON:0002037!1.84e-15!6;UBERON:0006215!1.84e-15!6;UBERON:0007023!5.50e-14!115;UBERON:0003075!6.51e-14!86;UBERON:0007284!6.51e-14!86;UBERON:0001896!9.60e-14!3;UBERON:0005290!9.60e-14!3;UBERON:0010096!9.60e-14!3;UBERON:0000988!1.70e-13!3;UBERON:0002346!3.22e-13!90;UBERON:0000033!1.23e-12!123;UBERON:0000153!5.91e-12!129;UBERON:0007811!5.91e-12!129;UBERON:0004121!1.30e-11!169;UBERON:0000924!2.74e-11!173;UBERON:0006601!2.74e-11!173;UBERON:0002022!5.57e-11!1 | |ontology_enrichment_uberon=UBERON:0004733!1.37e-38!12;UBERON:0002028!1.37e-38!12;UBERON:0007277!1.37e-38!12;UBERON:0004732!1.41e-35!13;UBERON:0003076!9.27e-31!15;UBERON:0003057!9.27e-31!15;UBERON:0002680!8.61e-27!9;UBERON:0001895!8.61e-27!9;UBERON:0010092!8.61e-27!9;UBERON:0000955!6.08e-24!69;UBERON:0006238!6.08e-24!69;UBERON:0001017!4.64e-23!82;UBERON:0005743!6.62e-22!86;UBERON:0000073!1.18e-19!94;UBERON:0001016!1.18e-19!94;UBERON:0002298!3.42e-19!8;UBERON:0001049!3.37e-18!57;UBERON:0005068!3.37e-18!57;UBERON:0006241!3.37e-18!57;UBERON:0007135!3.37e-18!57;UBERON:0002616!1.55e-17!59;UBERON:0002037!1.84e-15!6;UBERON:0006215!1.84e-15!6;UBERON:0007023!5.50e-14!115;UBERON:0003075!6.51e-14!86;UBERON:0007284!6.51e-14!86;UBERON:0001896!9.60e-14!3;UBERON:0005290!9.60e-14!3;UBERON:0010096!9.60e-14!3;UBERON:0000988!1.70e-13!3;UBERON:0002346!3.22e-13!90;UBERON:0000033!1.23e-12!123;UBERON:0000153!5.91e-12!129;UBERON:0007811!5.91e-12!129;UBERON:0004121!1.30e-11!169;UBERON:0000924!2.74e-11!173;UBERON:0006601!2.74e-11!173;UBERON:0002022!5.57e-11!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.16e-43;6!UBERON:0004733;3.38e-38;12!UBERON:0002028;3.38e-38;12!UBERON:0004732;2.56e-35;13!UBERON:0002680;3.84e-29;9!UBERON:0001895;3.84e-29;9!UBERON:0002360;2.55e-15;2!UBERON:0000094;2.55e-15;2!UBERON:0010743;2.55e-15;2!UBERON:0001896;9.90e-11;3!UBERON:0005290;9.90e-11;3!UBERON:0000073;6.82e-07;53!UBERON:0002616;6.82e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002037;3.16e-43;6!UBERON:0004733;3.38e-38;12!UBERON:0002028;3.38e-38;12!UBERON:0004732;2.56e-35;13!UBERON:0002680;3.84e-29;9!UBERON:0001895;3.84e-29;9!UBERON:0002360;2.55e-15;2!UBERON:0000094;2.55e-15;2!UBERON:0010743;2.55e-15;2!UBERON:0001896;9.90e-11;3!UBERON:0005290;9.90e-11;3!UBERON:0000073;6.82e-07;53!UBERON:0002616;6.82e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0004733,3.38e-38,12;UBERON:0002028,3.38e-38,12;UBERON:0007277,3.38e-38,12;UBERON:0004732,2.56e-35,13;UBERON:0003076,1.04e-30,15;UBERON:0003057,1.04e-30,15;UBERON:0002680,3.84e-29,9;UBERON:0001895,3.84e-29,9;UBERON:0010092,3.84e-29,9;UBERON:0002360,2.37e-15,2;UBERON:0000094,2.37e-15,2;UBERON:0010743,2.37e-15,2;UBERON:0001896,9.90e-11,3;UBERON:0005290,9.90e-11,3;UBERON:0010096,9.90e-11,3;UBERON:0000073,6.28e-09,53;UBERON:0002616,6.28e-09,53;UBERON:0001017,7.02e-09,81;UBERON:0001049,1.76e-08,56;UBERON:0005068,1.76e-08,56;UBERON:0006241,1.76e-08,56;UBERON:0007135,1.76e-08,56;UBERON:0001016,4.90e-08,89;UBERON:0000955,5.57e-07,68;UBERON:0006238,5.57e-07,68 | |||
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|short_description=p@chr2:156381975..156381997,+ | |short_description=p@chr2:156381975..156381997,+ | ||
}} | }} |
Latest revision as of 01:33, 29 July 2015
Short description: | p@chr2:156381975..156381997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:156381975..156381997, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.16e-43 | 6 |
rhombic lip | 3.16e-43 | 6 |
segmental subdivision of hindbrain | 3.38e-38 | 12 |
hindbrain | 3.38e-38 | 12 |
presumptive hindbrain | 3.38e-38 | 12 |
segmental subdivision of nervous system | 2.56e-35 | 13 |
posterior neural tube | 1.04e-30 | 15 |
chordal neural plate | 1.04e-30 | 15 |
regional part of metencephalon | 3.84e-29 | 9 |
metencephalon | 3.84e-29 | 9 |
future metencephalon | 3.84e-29 | 9 |
meninx | 2.37e-15 | 2 |
membrane organ | 2.37e-15 | 2 |
meningeal cluster | 2.37e-15 | 2 |
medulla oblongata | 9.90e-11 | 3 |
myelencephalon | 9.90e-11 | 3 |
future myelencephalon | 9.90e-11 | 3 |
regional part of nervous system | 6.28e-09 | 53 |
regional part of brain | 6.28e-09 | 53 |
central nervous system | 7.02e-09 | 81 |
neural tube | 1.76e-08 | 56 |
neural rod | 1.76e-08 | 56 |
future spinal cord | 1.76e-08 | 56 |
neural keel | 1.76e-08 | 56 |
nervous system | 4.90e-08 | 89 |
brain | 5.57e-07 | 68 |
future brain | 5.57e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.78e-15 | 2 |
carcinosarcoma | 1.78e-15 | 2 |