FFCP PHASE1:Hg19::chr22:37415776..37415843,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:37415776..37415843,+
|short_description=p1@MPST
|description=CAGE_peak_1_at_MPST_5end
|association_with_transcript=0bp_to_ENST00000341116,ENST00000404393,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4357 | |EntrezGene=4357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7223 | |HGNC=7223 | ||
|TSSclassifier=strong | |||
|UniProt=P25325,B1AH49 | |UniProt=P25325,B1AH49 | ||
|association_with_transcript=0bp_to_ENST00000341116,ENST00000404393,ENST00000429360,ENST00000485587_5end | |||
|cluster_id=chr22:37415776..37415843,+ | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_MPST_5end | |||
|id=chr22:37415776..37415843,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.18e-21!246;CL:0002321!2.24e-21!248;CL:0000222!2.64e-15!119;CL:0000183!5.41e-13!59;CL:0000115!3.14e-12!35;CL:0002078!3.23e-12!44;CL:0000187!8.84e-11!54;CL:0000192!1.86e-10!42;CL:0000514!1.86e-10!42;CL:0000393!2.01e-10!60;CL:0000211!2.01e-10!60;CL:0000680!2.33e-10!57;CL:0000056!2.33e-10!57;CL:0000355!2.33e-10!57;CL:0000359!6.27e-10!32;CL:0000066!7.54e-10!254;CL:0002139!2.27e-09!24;CL:0000071!4.06e-09!18;CL:0002546!4.06e-09!18;CL:0000055!1.86e-08!180;CL:1000449!8.37e-08!16;CL:0002681!8.23e-07!13;CL:0002584!8.23e-07!13;CL:1000497!9.13e-07!18;CL:0002518!9.13e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.60e-11;36!CL:0002139;2.25e-09;24!CL:0000359;3.31e-09;32!CL:0000071;4.66e-09;18!CL:0002078;1.94e-08;45!CL:1000449;3.55e-08;15!CL:0000192;1.41e-07;43!CL:0002681;3.15e-07;12!CL:0002584;3.15e-07;12!CL:1000497;4.74e-07;17!CL:0002518;4.74e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.81e-22,250;CL:0000222,1.06e-15,121;CL:0000115,8.06e-13,36;CL:0002078,8.87e-13,45;CL:0000187,1.19e-10,55;CL:0000393,2.59e-10,61;CL:0000211,2.59e-10,61;CL:0000192,2.73e-10,43;CL:0000514,2.73e-10,43;CL:0000680,3.04e-10,58;CL:0000056,3.04e-10,58;CL:0000355,3.04e-10,58;CL:0000359,6.25e-10,32;CL:0000066,7.23e-10,253;CL:0002139,2.26e-09,24;CL:0000071,4.05e-09,18;CL:0002546,4.05e-09,18;CL:1000449,3.60e-08,15;CL:0002681,3.37e-07,12;CL:0002584,3.37e-07,12;CL:1000497,4.96e-07,17;CL:0002518,4.96e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;4.66e-09;18!CL:0000514;1.41e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.69e-22!118;UBERON:0003104!2.16e-19!238;UBERON:0009142!2.16e-19!238;UBERON:0005256!7.29e-19!143;UBERON:0000481!1.72e-18!347;UBERON:0002100!2.02e-18!216;UBERON:0000490!1.83e-17!138;UBERON:0002049!2.22e-17!79;UBERON:0007798!2.22e-17!79;UBERON:0000119!1.98e-16!312;UBERON:0000483!4.56e-16!309;UBERON:0001009!6.12e-16!113;UBERON:0004535!2.68e-15!110;UBERON:0000055!5.32e-15!69;UBERON:0000486!1.87e-14!82;UBERON:0001981!3.09e-14!60;UBERON:0007500!3.09e-14!60;UBERON:0004537!3.09e-14!60;UBERON:0006965!3.09e-14!60;UBERON:0004872!3.19e-14!84;UBERON:0000914!6.17e-14!83;UBERON:0002329!6.17e-14!83;UBERON:0003077!6.17e-14!83;UBERON:0003059!6.17e-14!83;UBERON:0007282!6.17e-14!83;UBERON:0009618!6.17e-14!83;UBERON:0007285!6.17e-14!83;UBERON:0004290!2.76e-13!70;UBERON:0000477!5.18e-13!286;UBERON:0000475!2.15e-12!365;UBERON:0001637!1.16e-11!42;UBERON:0003509!1.16e-11!42;UBERON:0004572!1.16e-11!42;UBERON:0004111!2.69e-11!241;UBERON:0001134!3.19e-11!61;UBERON:0002036!3.19e-11!61;UBERON:0003082!3.19e-11!61;UBERON:0002385!4.06e-11!63;UBERON:0001015!4.06e-11!63;UBERON:0000383!4.06e-11!63;UBERON:0000025!1.52e-10!194;UBERON:0009569!9.83e-10!113;UBERON:0000468!1.09e-09!659;UBERON:0001986!4.06e-09!18;UBERON:0004638!4.06e-09!18;UBERON:0004852!4.06e-09!18;UBERON:0003103!1.79e-08!69;UBERON:0004573!2.91e-08!33;UBERON:0004571!2.91e-08!33;UBERON:0004211!8.37e-08!16;UBERON:0001285!8.37e-08!16;UBERON:0007684!8.37e-08!16;UBERON:0003220!8.37e-08!16;UBERON:0004208!8.37e-08!16;UBERON:0000922!9.22e-08!612;UBERON:0002050!1.12e-07!605;UBERON:0005423!1.12e-07!605;UBERON:0000923!1.81e-07!604;UBERON:0005291!1.81e-07!604;UBERON:0006598!1.81e-07!604;UBERON:0002532!1.81e-07!604;UBERON:0004119!1.93e-07!169;UBERON:0000925!1.93e-07!169;UBERON:0006595!1.93e-07!169;UBERON:0000487!2.07e-07!22;UBERON:0000467!2.38e-07!625;UBERON:0000480!3.33e-07!626;UBERON:0006555!7.33e-07!17;UBERON:0005103!7.33e-07!17;UBERON:0000083!7.33e-07!17;UBERON:0009201!7.33e-07!17;UBERON:0004819!7.33e-07!17;UBERON:0006553!7.33e-07!17;UBERON:0003074!7.33e-07!17;UBERON:0003060!7.33e-07!17;UBERON:0001225!8.23e-07!13;UBERON:0008987!8.23e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;5.54e-10;74!UBERON:0007500;2.61e-09;56!UBERON:0001981;2.61e-09;56!UBERON:0004537;2.61e-09;56!UBERON:0004638;4.66e-09;18!UBERON:0001986;4.66e-09;18!UBERON:0004852;4.66e-09;18!UBERON:0001637;1.22e-08;42!UBERON:0003509;1.22e-08;42!UBERON:0004572;1.22e-08;42!UBERON:0002049;3.52e-08;75!UBERON:0007798;3.52e-08;75!UBERON:0006555;3.55e-08;15!UBERON:0004819;3.55e-08;15!UBERON:0001285;3.55e-08;15!UBERON:0007684;3.55e-08;15!UBERON:0000055;4.83e-08;65!UBERON:0000490;7.68e-08;33!UBERON:0000353;1.99e-07;15!UBERON:0004573;2.09e-07;33!UBERON:0004571;2.09e-07;33!UBERON:0000487;2.40e-07;22!UBERON:0006554;2.59e-07;30!UBERON:0001008;2.59e-07;30!UBERON:0001225;3.15e-07;12!UBERON:0008987;3.15e-07;12!UBERON:0000025;3.20e-07;93 | |||
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| ||
|short_description=p1@MPST | |||
}} | }} |
Latest revision as of 03:44, 20 September 2015
Short description: | p1@MPST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPST_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 0bp_to_ENST00000341116, ENST00000404393, ENST00000429360, ENST00000485587_5end |
EntrezGene: | MPST |
HGNC: | 7223 |
UniProt: | P25325B1AH49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.81e-22 | 250 |
mesodermal cell | 1.06e-15 | 121 |
endothelial cell | 8.06e-13 | 36 |
meso-epithelial cell | 8.87e-13 | 45 |
muscle cell | 1.19e-10 | 55 |
electrically responsive cell | 2.59e-10 | 61 |
electrically active cell | 2.59e-10 | 61 |
smooth muscle cell | 2.73e-10 | 43 |
smooth muscle myoblast | 2.73e-10 | 43 |
muscle precursor cell | 3.04e-10 | 58 |
myoblast | 3.04e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.04e-10 | 58 |
vascular associated smooth muscle cell | 6.25e-10 | 32 |
epithelial cell | 7.23e-10 | 253 |
endothelial cell of vascular tree | 2.26e-09 | 24 |
blood vessel endothelial cell | 4.05e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.05e-09 | 18 |
epithelial cell of nephron | 3.60e-08 | 15 |
kidney cortical cell | 3.37e-07 | 12 |
renal cortical epithelial cell | 3.37e-07 | 12 |
kidney cell | 4.96e-07 | 17 |
kidney epithelial cell | 4.96e-07 | 17 |