FFCP PHASE1:Hg19::chr16:2589098..2589102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2589098..2589102,+ | |||
|description=CAGE_peak_at_chr16:2589098..2589102,+ | |description=CAGE_peak_at_chr16:2589098..2589102,+ | ||
|id=chr16:2589098..2589102,+ | |id=chr16:2589098..2589102,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.48e-15!140;CL:0002032!2.88e-15!165;CL:0000837!2.88e-15!165;CL:0000037!4.19e-15!172;CL:0000566!4.19e-15!172;CL:0000988!1.22e-14!182;CL:0002031!3.17e-14!124;CL:0002087!8.16e-12!119;CL:0000763!9.26e-10!112;CL:0000049!9.26e-10!112;CL:0000766!1.39e-09!76;CL:0000839!2.65e-09!70;CL:0000860!1.80e-08!45;CL:0000557!2.03e-08!71;CL:0002057!4.07e-08!42;CL:0002393!7.17e-08!9;CL:0002397!7.17e-08!9;CL:0002009!3.08e-07!65;CL:0002194!3.68e-07!63;CL:0000576!3.68e-07!63;CL:0000040!3.68e-07!63;CL:0000559!3.68e-07!63 | |ontology_enrichment_celltype=CL:0000738!1.48e-15!140;CL:0002032!2.88e-15!165;CL:0000837!2.88e-15!165;CL:0000037!4.19e-15!172;CL:0000566!4.19e-15!172;CL:0000988!1.22e-14!182;CL:0002031!3.17e-14!124;CL:0002087!8.16e-12!119;CL:0000763!9.26e-10!112;CL:0000049!9.26e-10!112;CL:0000766!1.39e-09!76;CL:0000839!2.65e-09!70;CL:0000860!1.80e-08!45;CL:0000557!2.03e-08!71;CL:0002057!4.07e-08!42;CL:0002393!7.17e-08!9;CL:0002397!7.17e-08!9;CL:0002009!3.08e-07!65;CL:0002194!3.68e-07!63;CL:0000576!3.68e-07!63;CL:0000040!3.68e-07!63;CL:0000559!3.68e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.91e-10;6!CL:0002397;2.91e-10;6!CL:0000875;7.43e-10;3!CL:0002396;7.43e-10;3!CL:0000576;1.07e-09;48!CL:0000236;2.14e-08;13!CL:0002087;5.15e-07;104 | |ontology_enrichment_celltype_v019=CL:0002393;2.91e-10;6!CL:0002397;2.91e-10;6!CL:0000875;7.43e-10;3!CL:0002396;7.43e-10;3!CL:0000576;1.07e-09;48!CL:0000236;2.14e-08;13!CL:0002087;5.15e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.28e-19,120;CL:0000738,1.68e-18,136;CL:0002393,2.11e-18,9;CL:0002397,2.11e-18,9;CL:0002087,2.57e-18,115;CL:0002032,1.20e-16,161;CL:0000837,1.20e-16,161;CL:0000860,1.44e-16,42;CL:0002057,1.44e-16,42;CL:0000037,9.07e-16,168;CL:0000988,9.64e-15,177;CL:0000766,1.62e-14,72;CL:0000473,2.99e-14,48;CL:0000234,2.99e-14,48;CL:0000839,1.05e-13,66;CL:0000557,1.81e-13,67;CL:0002194,3.10e-13,59;CL:0000576,3.10e-13,59;CL:0000040,3.10e-13,59;CL:0000559,3.10e-13,59;CL:0002009,9.80e-13,61;CL:0000763,2.60e-10,108;CL:0000049,2.60e-10,108;CL:0000875,6.84e-10,3;CL:0002396,6.84e-10,3;CL:0000236,7.46e-08,14;CL:0000838,6.80e-07,52;CL:0000542,9.63e-07,53;CL:0000051,9.63e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;7.59e-11;42!UBERON:0005425;8.48e-08;1 | |ontology_enrichment_development_v019=CL:0002057;7.59e-11;42!UBERON:0005425;8.48e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-08!115;UBERON:0002390!4.14e-08!102;UBERON:0003061!4.14e-08!102;UBERON:0002193!5.96e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!2.42e-08!115;UBERON:0002390!4.14e-08!102;UBERON:0003061!4.14e-08!102;UBERON:0002193!5.96e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.48e-08;1!UBERON:0001785;8.48e-08;1!UBERON:0002464;8.48e-08;1!UBERON:0004904;8.48e-08;1!UBERON:0001021;8.48e-08;1!UBERON:0000178;3.65e-07;15!UBERON:0000179;3.65e-07;15!UBERON:0000463;3.65e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000941;8.48e-08;1!UBERON:0001785;8.48e-08;1!UBERON:0002464;8.48e-08;1!UBERON:0004904;8.48e-08;1!UBERON:0001021;8.48e-08;1!UBERON:0000178;3.65e-07;15!UBERON:0000179;3.65e-07;15!UBERON:0000463;3.65e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.11e-15,98;UBERON:0003061,2.11e-15,98;UBERON:0002193,1.12e-13,108;UBERON:0002371,1.32e-11,76;UBERON:0001474,1.38e-10,82;UBERON:0004765,1.93e-09,90;UBERON:0002405,4.61e-09,93;UBERON:0001434,2.89e-08,100;UBERON:0000941,5.70e-08,1;UBERON:0001785,5.70e-08,1;UBERON:0002464,5.70e-08,1;UBERON:0004904,5.70e-08,1;UBERON:0001021,5.70e-08,1;UBERON:0003902,5.70e-08,1;UBERON:0005425,5.70e-08,1;UBERON:0000178,3.55e-07,15;UBERON:0000179,3.55e-07,15;UBERON:0000463,3.55e-07,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.458480434487708,0.328402357799783,0.236132343941038,0,0.383829398097213,0.619264493264304,0,0,0,0.154934401160603,0.142169232487422,0,1.66198622559563,1.80490002723128,0.651032612147555,0.895661896959697,0,0.257575567634187,1.01778767145695,0.377875943688809,0.970336244751265,0.464858073811369,1.23350366406548,1.23882548358041,0,0,0,0,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0.306083892370903,0.962787081228281,0,0.659702600373432,0,0,0,0,1.24564449799115,0.251248665256743,1.0429658368404,0.217188844705117,0,0.368277635987565,0,0.633765858935825,1.27562579979026,0.838634582033504,1.01095768031846,0.750884464207532,0.48217676009124,0.570025487482497,2.38700012638908,1.27864907635244,0,0,1.77901850772711,0,0,0.574752439954483,0,0,1.1384259382189,5.28513470433845,2.6759125968766,0,0.560508562981536,0.263384084775077,0.590129310341499,1.17903228824749,0.411202997999018,0.167186495390678,0,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0,0,0,0.829050053357545,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,1.00803371612366,0.802320587350522,1.59306844271079,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0.522389211897802,0.132957960518865,1.43094374583205,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0.709336764396714,0.560677600142307,0,0,0,0.134710672069688,0.653847612453835,0.151357427644931,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.757301322732344,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0.272746120590835,0,0.365921118388786,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,1.03664057770386,0.288239906833923,0.6312121671319,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0.336255431980582,0.591092280605782,1.07813787429759,0.513372145118994,0,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0.320182673410333,0.303127571446259,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0,0,0.114814448164607,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0.219259876645935,0.784306353074702,0,0,0,0.206082023295445,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0,0.290033387828457,0.255679882248303,0,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,2.29391162142713,1.13929437434833,1.90585420366231,0.411362273086194,0,1.08006287447623,0.79312517629427,0.106824071127473,0.962479855263359,0.245040215981032,0.371606350251437,0.28853842595289,0.213425530045242,0,0.199579371432817,0.191505370132367,0,0,0,0.456469358066384,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,1.4098700508785,0,0.439524537815682,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0.844501632511974,0.19924798825107,0.552567831062295,0,0,0.615424027305347,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0.472775363535873,0,0.583209226766509,0.173624994933292,0,0.361789315876224,0,0.663475559587348,0.295547618953547,0.219385397153973,0.10893846351899,0.139423744278603,0.153900517007594,0,0.23056390438806,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0.451191321234361,0,0,0,0,0,0.326465616318295,0.1413530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| ||
|short_description=p@chr16:2589098..2589102,+ | |short_description=p@chr16:2589098..2589102,+ | ||
}} | }} |
Latest revision as of 07:27, 25 July 2015
Short description: | p@chr16:2589098..2589102, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2589098..2589102, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.11e-15 | 98 |
blood island | 2.11e-15 | 98 |
hemolymphoid system | 1.12e-13 | 108 |
bone marrow | 1.32e-11 | 76 |
bone element | 1.38e-10 | 82 |
skeletal element | 1.93e-09 | 90 |
immune system | 4.61e-09 | 93 |
skeletal system | 2.89e-08 | 100 |
cranial nerve II | 5.70e-08 | 1 |
cranial nerve | 5.70e-08 | 1 |
nerve trunk | 5.70e-08 | 1 |
nerve connecting eye with brain | 5.70e-08 | 1 |
nerve | 5.70e-08 | 1 |
retinal neural layer | 5.70e-08 | 1 |
presumptive neural retina | 5.70e-08 | 1 |
blood | 3.55e-07 | 15 |
haemolymphatic fluid | 3.55e-07 | 15 |
organism substance | 3.55e-07 | 15 |