FFCP PHASE1:Hg19::chr2:118846008..118846100,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:118846008..118846100,+
|short_description=p1@INSIG2
|description=CAGE_peak_1_at_INSIG2_5end
|association_with_transcript=0bp_to_ENST00000245787,ENST0000041...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51141 | |EntrezGene=51141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20452 | |HGNC=20452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5U4,F8WCG8 | |UniProt=Q9Y5U4,F8WCG8 | ||
|association_with_transcript=0bp_to_ENST00000245787,ENST00000411929,ENST00000471186,ENST00000485520,NM_016133,uc002tlk.2,uc010yye.1_5end | |||
|cluster_id=chr2:118846008..118846100,+ | |||
|description=CAGE_peak_1_at_INSIG2_5end | |||
|id=chr2:118846008..118846100,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-21!115;UBERON:0001049!3.20e-17!57;UBERON:0005068!3.20e-17!57;UBERON:0006241!3.20e-17!57;UBERON:0007135!3.20e-17!57;UBERON:0002616!2.97e-16!59;UBERON:0002780!1.56e-15!41;UBERON:0001890!1.56e-15!41;UBERON:0006240!1.56e-15!41;UBERON:0003080!3.12e-15!42;UBERON:0001017!1.75e-13!82;UBERON:0000955!3.02e-13!69;UBERON:0006238!3.02e-13!69;UBERON:0005743!6.51e-13!86;UBERON:0002020!7.31e-13!34;UBERON:0003528!7.31e-13!34;UBERON:0001893!1.54e-12!34;UBERON:0002791!4.65e-12!33;UBERON:0001869!6.43e-12!32;UBERON:0000477!1.93e-11!286;UBERON:0003075!8.34e-11!86;UBERON:0007284!8.34e-11!86;UBERON:0000073!1.12e-10!94;UBERON:0001016!1.12e-10!94;UBERON:0002346!3.01e-10!90;UBERON:0000025!5.62e-10!194;UBERON:0002619!6.80e-10!22;UBERON:0004111!2.20e-09!241;UBERON:0000956!4.17e-09!25;UBERON:0000203!4.17e-09!25;UBERON:0001950!7.22e-09!20;UBERON:0003056!1.09e-08!61;UBERON:0000153!3.78e-07!129;UBERON:0007811!3.78e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.46e-11;41!UBERON:0001890;1.46e-11;41!UBERON:0003528;3.65e-11;34!UBERON:0002020;3.65e-11;34!UBERON:0001893;5.13e-11;34!UBERON:0002791;5.52e-11;32!UBERON:0001869;5.97e-11;32!UBERON:0000073;4.34e-10;53!UBERON:0002616;4.34e-10;53!UBERON:0002619;4.76e-10;22!UBERON:0000956;2.66e-09;25!UBERON:0000203;2.66e-09;25!UBERON:0001950;5.10e-09;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.63e-20,114;UBERON:0001049,1.80e-17,56;UBERON:0005068,1.80e-17,56;UBERON:0006241,1.80e-17,56;UBERON:0007135,1.80e-17,56;UBERON:0000073,1.46e-16,53;UBERON:0002616,1.46e-16,53;UBERON:0002780,1.56e-15,41;UBERON:0001890,1.56e-15,41;UBERON:0003080,1.56e-15,41;UBERON:0006240,1.56e-15,41;UBERON:0001017,1.31e-13,81;UBERON:0000955,2.15e-13,68;UBERON:0006238,2.15e-13,68;UBERON:0003528,7.31e-13,34;UBERON:0002020,7.31e-13,34;UBERON:0001893,1.54e-12,34;UBERON:0011216,2.65e-12,223;UBERON:0001869,6.43e-12,32;UBERON:0002791,6.90e-12,32;UBERON:0001016,3.44e-11,89;UBERON:0003075,8.99e-11,82;UBERON:0007284,8.99e-11,82;UBERON:0002346,3.40e-10,86;UBERON:0000025,3.57e-10,192;UBERON:0002619,6.80e-10,22;UBERON:0004111,1.12e-09,240;UBERON:0000956,4.17e-09,25;UBERON:0000203,4.17e-09,25;UBERON:0001950,7.21e-09,20;UBERON:0003056,3.58e-08,61;UBERON:0010314,1.01e-07,132;UBERON:0010371,3.39e-07,104 | |||
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| ||
|short_description=p1@INSIG2 | |||
}} | }} |
Latest revision as of 15:56, 16 September 2015
Short description: | p1@INSIG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_INSIG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000245787, ENST00000411929, ENST00000471186, ENST00000485520, NM_016133, uc002tlk.2, uc010yye.1_5end |
EntrezGene: | INSIG2 |
HGNC: | 20452 |
UniProt: | Q9Y5U4F8WCG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.63e-20 | 114 |
neural tube | 1.80e-17 | 56 |
neural rod | 1.80e-17 | 56 |
future spinal cord | 1.80e-17 | 56 |
neural keel | 1.80e-17 | 56 |
regional part of nervous system | 1.46e-16 | 53 |
regional part of brain | 1.46e-16 | 53 |
regional part of forebrain | 1.56e-15 | 41 |
forebrain | 1.56e-15 | 41 |
anterior neural tube | 1.56e-15 | 41 |
future forebrain | 1.56e-15 | 41 |
central nervous system | 1.31e-13 | 81 |
brain | 2.15e-13 | 68 |
future brain | 2.15e-13 | 68 |
brain grey matter | 7.31e-13 | 34 |
gray matter | 7.31e-13 | 34 |
telencephalon | 1.54e-12 | 34 |
organ system subdivision | 2.65e-12 | 223 |
cerebral hemisphere | 6.43e-12 | 32 |
regional part of telencephalon | 6.90e-12 | 32 |
nervous system | 3.44e-11 | 89 |
neural plate | 8.99e-11 | 82 |
presumptive neural plate | 8.99e-11 | 82 |
neurectoderm | 3.40e-10 | 86 |
tube | 3.57e-10 | 192 |
regional part of cerebral cortex | 6.80e-10 | 22 |
anatomical conduit | 1.12e-09 | 240 |
cerebral cortex | 4.17e-09 | 25 |
pallium | 4.17e-09 | 25 |
neocortex | 7.21e-09 | 20 |
pre-chordal neural plate | 3.58e-08 | 61 |
structure with developmental contribution from neural crest | 1.01e-07 | 132 |
ecto-epithelium | 3.39e-07 | 104 |