FFCP PHASE1:Mm9::chr12:21423452..21423466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100503129,22630 | |EntrezGene=100503129,22630 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |MCL_coexpression_id=60 | ||
|TSSclassifier=NA | |||
|UniProt=F6YY69 | |UniProt=F6YY69 | ||
|association_with_transcript=-3bp_to_ENSMUST00000155480_5end | |association_with_transcript=-3bp_to_ENSMUST00000155480_5end | ||
|cluster_id=chr12:21423452..21423466,- | |||
|description=CAGE_peak_2_at_LOC100503129_5end,CAGE_peak_2_at_Ywhaq_5end | |description=CAGE_peak_2_at_LOC100503129_5end,CAGE_peak_2_at_Ywhaq_5end | ||
|id=chr12:21423452..21423466,- | |id=chr12:21423452..21423466,- | ||
|ontology_enrichment_celltype=CL:0000117!3.59e-13!23;CL:0000337!3.59e-13!23;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000393!4.34e-07!39;CL:0000211!4.34e-07!39 | |ontology_enrichment_celltype=CL:0000117!3.59e-13!23;CL:0000337!3.59e-13!23;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000393!4.34e-07!39;CL:0000211!4.34e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-13,23;CL:0000337,3.59e-13,23;CL:0000540,5.22e-09,33;CL:0000047,5.22e-09,33;CL:0000031,5.22e-09,33;CL:0000404,5.22e-09,33;CL:0000393,4.34e-07,39;CL:0000211,4.34e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.99e-22!63;UBERON:0001049!1.02e-21!52;UBERON:0005068!1.02e-21!52;UBERON:0006241!1.02e-21!52;UBERON:0007135!1.02e-21!52;UBERON:0002346!1.09e-21!71;UBERON:0003075!1.09e-21!71;UBERON:0007284!1.09e-21!71;UBERON:0000955!1.66e-20!50;UBERON:0006238!1.66e-20!50;UBERON:0002616!3.77e-20!49;UBERON:0000073!1.08e-19!75;UBERON:0001016!1.08e-19!75;UBERON:0004121!2.66e-19!102;UBERON:0000924!2.66e-19!102;UBERON:0006601!2.66e-19!102;UBERON:0003056!4.25e-19!49;UBERON:0001017!7.51e-19!73;UBERON:0005743!7.51e-19!73;UBERON:0003080!3.42e-18!40;UBERON:0002780!1.34e-17!39;UBERON:0001890!1.34e-17!39;UBERON:0006240!1.34e-17!39;UBERON:0002020!4.25e-17!34;UBERON:0002791!4.61e-14!29;UBERON:0003528!4.61e-14!29;UBERON:0001893!4.61e-14!29;UBERON:0007811!1.33e-11!86;UBERON:0000153!1.88e-11!94;UBERON:0000956!8.56e-10!21;UBERON:0001869!8.56e-10!21;UBERON:0000203!8.56e-10!21;UBERON:0002619!4.34e-08!17;UBERON:0002021!4.54e-07!10;UBERON:0000411!4.54e-07!10;UBERON:0001950!4.54e-07!10 | |ontology_enrichment_uberon=UBERON:0000033!2.99e-22!63;UBERON:0001049!1.02e-21!52;UBERON:0005068!1.02e-21!52;UBERON:0006241!1.02e-21!52;UBERON:0007135!1.02e-21!52;UBERON:0002346!1.09e-21!71;UBERON:0003075!1.09e-21!71;UBERON:0007284!1.09e-21!71;UBERON:0000955!1.66e-20!50;UBERON:0006238!1.66e-20!50;UBERON:0002616!3.77e-20!49;UBERON:0000073!1.08e-19!75;UBERON:0001016!1.08e-19!75;UBERON:0004121!2.66e-19!102;UBERON:0000924!2.66e-19!102;UBERON:0006601!2.66e-19!102;UBERON:0003056!4.25e-19!49;UBERON:0001017!7.51e-19!73;UBERON:0005743!7.51e-19!73;UBERON:0003080!3.42e-18!40;UBERON:0002780!1.34e-17!39;UBERON:0001890!1.34e-17!39;UBERON:0006240!1.34e-17!39;UBERON:0002020!4.25e-17!34;UBERON:0002791!4.61e-14!29;UBERON:0003528!4.61e-14!29;UBERON:0001893!4.61e-14!29;UBERON:0007811!1.33e-11!86;UBERON:0000153!1.88e-11!94;UBERON:0000956!8.56e-10!21;UBERON:0001869!8.56e-10!21;UBERON:0000203!8.56e-10!21;UBERON:0002619!4.34e-08!17;UBERON:0002021!4.54e-07!10;UBERON:0000411!4.54e-07!10;UBERON:0001950!4.54e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-23,54;UBERON:0002346,8.34e-22,64;UBERON:0003075,8.34e-22,64;UBERON:0007284,8.34e-22,64;UBERON:0001049,1.01e-21,52;UBERON:0005068,1.01e-21,52;UBERON:0006241,1.01e-21,52;UBERON:0007135,1.01e-21,52;UBERON:0010371,4.32e-20,73;UBERON:0001016,1.07e-19,75;UBERON:0003056,4.25e-19,49;UBERON:0004121,6.95e-19,95;UBERON:0000924,6.95e-19,95;UBERON:0006601,6.95e-19,95;UBERON:0001017,7.43e-19,73;UBERON:0000955,1.59e-18,47;UBERON:0006238,1.59e-18,47;UBERON:0003080,3.42e-18,40;UBERON:0002616,3.57e-18,46;UBERON:0002780,1.34e-17,39;UBERON:0001890,1.34e-17,39;UBERON:0006240,1.34e-17,39;UBERON:0010314,2.20e-17,92;UBERON:0002020,4.25e-17,34;UBERON:0003528,4.61e-14,29;UBERON:0002791,4.61e-14,29;UBERON:0001893,4.61e-14,29;UBERON:0000956,8.56e-10,21;UBERON:0001869,8.56e-10,21;UBERON:0000203,8.56e-10,21;UBERON:0002619,4.34e-08,17;UBERON:0002021,4.54e-07,10;UBERON:0000411,4.54e-07,10;UBERON:0001950,4.54e-07,10 | |||
|phase1_expression=8.16759120234449,2.44282785347553,0.909998478779072,2.72217790176147,2.50447864973174,3.18970616632591,2.80335168714631,3.87369970324729,1.68946466582,1.63845168425395,3.76679530096111,2.6324812468461,2.56801094896809,2.27293046289393,3.99731714178795,3.44207954562704,4.19737126876888,2.99689057090326,2.4680598049033,2.12194825899015,3.99703463710028,2.97872853602656,6.00759515019551,2.55987876469451,3.21172993494038,2.8711598205751,2.15380998079537,2.37018355954478,3.6104449696711,1.76421090831952,3.32595765982957,1.90509202037889,2.46025915033828,15.8481681015439,5.19932915552294,5.98444723290572,4.08338712524738,4.60384793810598,10.1573594788094,8.89990364755457,4.70585190424811,6.14740936462601,6.79714494243615,1.25896817975577,1.92616169317078,2.20256102594018,0.782391344348039,3.05235218932625,4.83309602015838,3.4997381833371,4.75953833526233,2.87505128729943,2.85230430298152,4.35217285206807,1.34437519656986,6.17422646486273,6.30373567865265,6.70373719960675,9.1042407386819,7.93486468908049,12.0427966666174,3.72728985276045,2.66788438833342,1.7997994345628,0.988866362566974,2.8419204597844,0.898800331555214,3.07374644257244,9.02099627083756,9.45041568321835,10.9368979902719,13.4255962669788,17.0068776532742,11.3916443269907,10.8305382250607,11.0306254393203,20.9220173898839,11.8749224419225,16.4358990584181,6.72620067423989,9.42322729104819,13.5437476344758,18.1468949350898,24.7615548413939,14.6686317865738,15.6153150301044,14.0947963991112,9.31997229126503,7.57261933331841,9.44644501334819,4.05810284182349,2.58127163094416,2.03991400112325,3.2382191498269,5.84798775702902,1.79210754838934,2.94933282276679,5.28333999991979,5.97507810586598,7.42013106471715,12.1125341007945,5.13305909657271,2.54805239706646,7.11066703153331,12.3399893376392,11.4011939463794,6.0662933401774,2.74041311325744,3.88406825470758,4.00793775475027,7.11289839741157,6.69824052286711,5.30415643688935,5.12456977878917,5.17390311397101,6.03199638382442,2.47194967734374,3.90418263683761,2.65383165584962,4.36770494858005,2.42925670306433,2.42437626567611,0,12.0040126774734,10.2628886338593,3.83185582812887,5.63131085177825,9.59844369589452,7.49714339731082,12.1330417917906,10.5225138648284,14.1989417887537,10.2556348913443,12.0186264945255,11.6361304953354,12.1680947300818,7.02691610567182,1.61729061793121,5.05445516867349,7.78634866779954,4.81445638962004,7.35686734187113,7.38254732201932,6.32960234910003,6.46346741937615,7.04625461566674,7.96464658757695,4.13925393182425,6.89817577385095,4.9167580843633,7.2139960907219,5.69908904311695,4.72680323683516,5.2237824978325,3.90986059175093,5.7719937377363,5.61770549850588,5.40430604940902,5.11494298912067,4.97101854085205,5.39409937956521,5.22179978236943,6.62885259638589,3.93528463494808,3.70241070929708,4.18561100550734,6.43856163359086,4.78737903705395,4.77223564749093,3.77585167381919,1.86458261955468,2.04679982395465,3.07370161407471,1.8788898626452,10.9350773253346,12.4514580978934,2.97376904685418,2.3800550999719,6.18535926552179,4.41249676534833,5.54130083685001,4.84040459096022,4.66993892074228,4.56541502670142,4.74529061544512,4.94096864172033,6.03204501120647,3.78017296878187,4.874102177978,0.898819408654221,4.32276099749388,3.18626037206988,6.06937283049861,4.68418901699888,6.76246414038483,3.86937522906097,4.46090720485539,5.11991485199326,4.93244989569207,2.36176236767363,3.1399745568275,3.08492909804501,1.1858105083486,3.17005700860579,3.34150291692445,2.47348323623339,1.62288097110802,4.3411888755435,2.29163266603278,2.01387296215567,2.2698931748505,4.94210543738547,1.43768206527355,5.58211421502755,3.12037673114561,4.54641980304801,2.69096120282868,2.41221760681684,4.61882975416512,7.20067364727842,7.17045896344914,6.28056817368196,5.86725620721255,3.01511263395268,5.95109102215034,4.29294025287157,5.35959489961049,5.3151525515706,6.53764551495697,3.76885623846197,7.59813920209941,5.78596234326046,0,1.08781136763742,2.95058563811422,2.20749397043786,12.6834966090356,14.417037450841,8.85248705034047,1.76729649043061,3.47059041357882,5.0757036758563,5.17016154558717,5.9742199488138,4.01037613348309,5.09537755419898,2.42886421004937,3.79932615284705,3.55759000151871,7.71171159412337,3.97432238583152,6.58842733568844,5.04949573996086,4.45419332025846,7.96470830039777,5.09839335925461,6.34879469625977,4.90373207365335,4.13422650033082,6.45613810682248,6.20227903603731,5.81653967164009,3.92147116223193,5.05658812697306,6.32511651449993,5.15677716240934,11.9153862013826,6.12207719706455,5.43306471887569,10.7168517515796,8.6896714484714,8.20496560969525,7.40470592709544,9.13394847343798,5.86679270159276,4.2366414172764,3.96951116498931,4.78170133530292,3.71368181400583,5.54878909339034,5.13301079213487,5.9090723908222,3.78925087618806,8.15871328846243,3.07567585436135,6.60437977482312,2.59272338317596,2.63715839806567,1.6403307326523,2.97411625168479,7.9889862097112,6.29781535456461,5.11339903076368,1.90934123603023,6.80122386199441,4.47302827679067,4.968245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| ||
|short_description=p2@LOC100503129,p2@Ywhaq | |short_description=p2@LOC100503129,p2@Ywhaq | ||
}} | }} |
Latest revision as of 11:59, 26 September 2015
Short description: | p2@LOC100503129, p2@Ywhaq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100503129_5end, CAGE_peak_2_at_Ywhaq_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -3bp_to_ENSMUST00000155480_5end |
EntrezGene: | 100503129,22630 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.59e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.59e-13 | 23 |
neuron | 5.22e-09 | 33 |
neuronal stem cell | 5.22e-09 | 33 |
neuroblast | 5.22e-09 | 33 |
electrically signaling cell | 5.22e-09 | 33 |
electrically responsive cell | 4.34e-07 | 39 |
electrically active cell | 4.34e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.26e-23 | 54 |
neurectoderm | 8.34e-22 | 64 |
neural plate | 8.34e-22 | 64 |
presumptive neural plate | 8.34e-22 | 64 |
neural tube | 1.01e-21 | 52 |
neural rod | 1.01e-21 | 52 |
future spinal cord | 1.01e-21 | 52 |
neural keel | 1.01e-21 | 52 |
ecto-epithelium | 4.32e-20 | 73 |
nervous system | 1.07e-19 | 75 |
pre-chordal neural plate | 4.25e-19 | 49 |
ectoderm-derived structure | 6.95e-19 | 95 |
ectoderm | 6.95e-19 | 95 |
presumptive ectoderm | 6.95e-19 | 95 |
central nervous system | 7.43e-19 | 73 |
brain | 1.59e-18 | 47 |
future brain | 1.59e-18 | 47 |
anterior neural tube | 3.42e-18 | 40 |
regional part of brain | 3.57e-18 | 46 |
regional part of forebrain | 1.34e-17 | 39 |
forebrain | 1.34e-17 | 39 |
future forebrain | 1.34e-17 | 39 |
structure with developmental contribution from neural crest | 2.20e-17 | 92 |
gray matter | 4.25e-17 | 34 |
brain grey matter | 4.61e-14 | 29 |
regional part of telencephalon | 4.61e-14 | 29 |
telencephalon | 4.61e-14 | 29 |
cerebral cortex | 8.56e-10 | 21 |
cerebral hemisphere | 8.56e-10 | 21 |
pallium | 8.56e-10 | 21 |
regional part of cerebral cortex | 4.34e-08 | 17 |
occipital lobe | 4.54e-07 | 10 |
visual cortex | 4.54e-07 | 10 |
neocortex | 4.54e-07 | 10 |