FFCP PHASE1:Mm9::chr7:148274020..148274083,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56460 | |EntrezGene=56460 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=21 | |MCL_coexpression_id=21 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000160403,uc009kjj.2_5end | |association_with_transcript=0bp_to_ENSMUST00000160403,uc009kjj.2_5end | ||
|cluster_id=chr7:148274020..148274083,+ | |||
|description=CAGE_peak_4_at_Pkp3_5end | |description=CAGE_peak_4_at_Pkp3_5end | ||
|id=chr7:148274020..148274083,+ | |id=chr7:148274020..148274083,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.36e-08!32;CL:0002032!1.36e-08!32;CL:0000037!1.36e-08!32;CL:0000566!1.36e-08!32;CL:0000837!1.36e-08!32;CL:0000791!1.17e-07!9;CL:0000789!1.17e-07!9;CL:0002420!1.17e-07!9;CL:0002419!1.17e-07!9;CL:0000790!1.17e-07!9;CL:0000624!6.45e-07!8 | |ontology_enrichment_celltype=CL:0000988!1.36e-08!32;CL:0002032!1.36e-08!32;CL:0000037!1.36e-08!32;CL:0000566!1.36e-08!32;CL:0000837!1.36e-08!32;CL:0000791!1.17e-07!9;CL:0000789!1.17e-07!9;CL:0002420!1.17e-07!9;CL:0002419!1.17e-07!9;CL:0000790!1.17e-07!9;CL:0000624!6.45e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.05e-18,32;CL:0002032,2.05e-18,32;CL:0000037,2.05e-18,32;CL:0000837,2.05e-18,32;CL:0000791,7.20e-14,9;CL:0000789,7.20e-14,9;CL:0002420,7.20e-14,9;CL:0002419,7.20e-14,9;CL:0000790,7.20e-14,9;CL:0002031,3.68e-13,25;CL:0000624,2.23e-12,8;CL:0000838,2.49e-12,12;CL:0002320,6.38e-12,46;CL:0000134,6.38e-12,46;CL:0000219,3.39e-11,54;CL:0000542,3.58e-11,13;CL:0000051,3.58e-11,13;CL:0000084,6.38e-11,11;CL:0000827,6.38e-11,11;CL:0000893,3.09e-09,6;CL:0002489,3.09e-09,6;CL:0000898,3.09e-09,6;CL:0000809,3.09e-09,6;CL:0000810,3.09e-09,6;CL:0000895,3.09e-09,6;CL:0000808,3.09e-09,6;CL:0000894,3.09e-09,6;CL:0000806,3.09e-09,6;CL:0000807,3.09e-09,6;CL:0000805,3.09e-09,6;CL:0002425,3.09e-09,6;CL:0002436,3.09e-09,6;CL:0002427,3.09e-09,6;CL:0002428,3.09e-09,6;CL:0002429,3.09e-09,6;CL:0002433,3.09e-09,6;CL:0002431,3.09e-09,6;CL:0002432,3.09e-09,6;CL:0000049,9.36e-09,19;CL:0000738,6.30e-08,17;CL:0002087,6.30e-08,17;CL:0000553,3.71e-07,6;CL:0000556,3.71e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.97e-17!48;UBERON:0002390!2.52e-15!45;UBERON:0003061!2.52e-15!45;UBERON:0004177!1.20e-13!29;UBERON:0002405!1.62e-12!70;UBERON:0003408!6.05e-11!24;UBERON:0002370!1.13e-10!23;UBERON:0000974!1.13e-10!23;UBERON:0004807!1.13e-10!23;UBERON:0005058!1.13e-10!23;UBERON:0003351!1.13e-10!23;UBERON:0009113!1.13e-10!23;UBERON:0003295!1.13e-10!23;UBERON:0009722!1.13e-10!23;UBERON:0005562!1.13e-10!23;UBERON:0007690!1.13e-10!23;UBERON:0006562!1.42e-10!24;UBERON:0001557!1.42e-10!24;UBERON:0001042!1.42e-10!24;UBERON:0008814!1.42e-10!24;UBERON:0009145!1.42e-10!24;UBERON:0005057!1.80e-08!51;UBERON:0000072!2.99e-08!27;UBERON:0001004!1.06e-07!42;UBERON:0000065!1.98e-07!41;UBERON:0003081!8.41e-07!88 | |ontology_enrichment_uberon=UBERON:0002193!3.97e-17!48;UBERON:0002390!2.52e-15!45;UBERON:0003061!2.52e-15!45;UBERON:0004177!1.20e-13!29;UBERON:0002405!1.62e-12!70;UBERON:0003408!6.05e-11!24;UBERON:0002370!1.13e-10!23;UBERON:0000974!1.13e-10!23;UBERON:0004807!1.13e-10!23;UBERON:0005058!1.13e-10!23;UBERON:0003351!1.13e-10!23;UBERON:0009113!1.13e-10!23;UBERON:0003295!1.13e-10!23;UBERON:0009722!1.13e-10!23;UBERON:0005562!1.13e-10!23;UBERON:0007690!1.13e-10!23;UBERON:0006562!1.42e-10!24;UBERON:0001557!1.42e-10!24;UBERON:0001042!1.42e-10!24;UBERON:0008814!1.42e-10!24;UBERON:0009145!1.42e-10!24;UBERON:0005057!1.80e-08!51;UBERON:0000072!2.99e-08!27;UBERON:0001004!1.06e-07!42;UBERON:0000065!1.98e-07!41;UBERON:0003081!8.41e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.04e-32,48;UBERON:0002405,2.04e-32,48;UBERON:0002390,8.87e-29,45;UBERON:0003061,8.87e-29,45;UBERON:0004177,1.18e-26,29;UBERON:0005057,1.18e-26,29;UBERON:0000077,1.48e-22,35;UBERON:0002370,2.98e-22,23;UBERON:0000974,2.98e-22,23;UBERON:0004807,2.98e-22,23;UBERON:0005058,2.98e-22,23;UBERON:0003351,2.98e-22,23;UBERON:0009113,2.98e-22,23;UBERON:0003295,2.98e-22,23;UBERON:0009722,2.98e-22,23;UBERON:0005562,2.98e-22,23;UBERON:0007690,2.98e-22,23;UBERON:0006562,4.57e-21,24;UBERON:0003408,4.57e-21,24;UBERON:0001557,4.57e-21,24;UBERON:0001042,4.57e-21,24;UBERON:0008814,4.57e-21,24;UBERON:0009145,4.57e-21,24;UBERON:0000072,4.79e-18,27;UBERON:0000065,1.42e-14,41;UBERON:0001004,4.59e-14,42;UBERON:0003081,8.25e-13,87;UBERON:0007811,4.65e-12,36;UBERON:0002384,6.38e-12,46;UBERON:0000926,5.92e-10,120;UBERON:0004120,5.92e-10,120;UBERON:0006603,5.92e-10,120;UBERON:0000153,3.47e-09,43;UBERON:0001041,9.79e-08,80;UBERON:0000490,9.09e-07,66 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,52.2949459938384,3.801295498095,5.85161315804984,2.91070545983358,2.95156988282745,30.816131387617,37.1536710280739,3.99731714178795,6.88415909125408,0.699561878128147,22.0823515750766,19.7444784392264,15.2780274647291,0.595303031057488,0,0,2.71987118748791,3.21172993494038,0,0.430761996159075,0,1.33016393619462,2.26827116783938,1.10865255327652,1.27006134691926,0,0,0,0.166234645358492,0,1.67412652294763,3.906676722619,2.09409497589519,0.588231488031014,0,0.485510353031154,0,0,0,3.12956537739216,0,0,0,1.67983705950435,0,11.7447824240415,33.3666585325218,14.7881271622684,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,1.77858959222228,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.757261933331841,0,0,0,0,0,0,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.91347103775248,6.73238497482646,1.48442139064825,0.867426633830679,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0,0.578397427679647,0.884610551949874,0,1.54589062922275,0.484875253135222,0,0,0,2.29911349687732,3.83408398418945,4.19931911695385,4.06624726633807,0,0,0,0.173824320192276,0,0,0,0,0.995255764880744,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,1.42081749697796,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0,0,0.102904612379284,0.660837565967596,0.528901133327089,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0.949058123089023,0.164698954724011,0.502670417600539,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,2.77129785249907,0.189491411770485,0,0,0.234690248288502,0,0,0,0.157635144106191,0.664394068946325,0.478364305972461,1.3109065177259,1.55416483679306,1.01254341007058,0,0,0,0.827810238914197,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,0,0,0.18006109403131,0,0,0,0,0,0,1.87737366450968,0,0,0.16488625294148,0,0,0.238744688006273,0,0,0,6.83483523191411,1.23832120777933,0.555583582109135,1.88368457004691,2.7338845544205,4.34678529092393,5.94924504978494,5.03825228365169,4.97519905695926,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0,0.247960367176008,0.523511883968059,0,0.621339313086926,0.56369293868419,0.448549638131936,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0,4.10814456816632,1.82452693761148,2.77319584345034,4.28738715826724,3.22248052201467,4.37098980518783,3.72605893511903,3.69223817936443,3.73575864808146,6.55378537232999,3.93222122033678,5.55509920216589,7.02346443974405,8.53201385925453,0.226730383615211,0.887943813496259,0.448569283047378,0.335769232728157,0.772758376128762,1.68914227906064,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0.367687016900028,0,0,0,0,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0,0,0,0,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0.463735671240843 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,52.2949459938384,3.801295498095,5.85161315804984,2.91070545983358,2.95156988282745,30.816131387617,37.1536710280739,3.99731714178795,6.88415909125408,0.699561878128147,22.0823515750766,19.7444784392264,15.2780274647291,0.595303031057488,0,0,2.71987118748791,3.21172993494038,0,0.430761996159075,0,1.33016393619462,2.26827116783938,1.10865255327652,1.27006134691926,0,0,0,0.166234645358492,0,1.67412652294763,3.906676722619,2.09409497589519,0.588231488031014,0,0.485510353031154,0,0,0,3.12956537739216,0,0,0,1.67983705950435,0,11.7447824240415,33.3666585325218,14.7881271622684,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,1.77858959222228,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.757261933331841,0,0,0,0,0,0,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.91347103775248,6.73238497482646,1.48442139064825,0.867426633830679,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0,0.578397427679647,0.884610551949874,0,1.54589062922275,0.484875253135222,0,0,0,2.29911349687732,3.83408398418945,4.19931911695385,4.06624726633807,0,0,0,0.173824320192276,0,0,0,0,0.995255764880744,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,1.42081749697796,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0,0,0.102904612379284,0.660837565967596,0.528901133327089,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0.949058123089023,0.164698954724011,0.502670417600539,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,2.77129785249907,0.189491411770485,0,0,0.234690248288502,0,0,0,0.157635144106191,0.664394068946325,0.478364305972461,1.3109065177259,1.55416483679306,1.01254341007058,0,0,0,0.827810238914197,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,0,0,0.18006109403131,0,0,0,0,0,0,1.87737366450968,0,0,0.16488625294148,0,0,0.238744688006273,0,0,0,6.83483523191411,1.23832120777933,0.555583582109135,1.88368457004691,2.7338845544205,4.34678529092393,5.94924504978494,5.03825228365169,4.97519905695926,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0,0.247960367176008,0.523511883968059,0,0.621339313086926,0.56369293868419,0.448549638131936,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0,4.10814456816632,1.82452693761148,2.77319584345034,4.28738715826724,3.22248052201467,4.37098980518783,3.72605893511903,3.69223817936443,3.73575864808146,6.55378537232999,3.93222122033678,5.55509920216589,7.02346443974405,8.53201385925453,0.226730383615211,0.887943813496259,0.448569283047378,0.335769232728157,0.772758376128762,1.68914227906064,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0.367687016900028,0,0,0,0,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0,0,0,0,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0.463735671240843 | ||
|short_description=p4@Pkp3 | |short_description=p4@Pkp3 | ||
}} | }} |
Latest revision as of 03:27, 26 September 2015
Short description: | p4@Pkp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pkp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | 0bp_to_ENSMUST00000160403, uc009kjj.2_5end |
EntrezGene: | Pkp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data