FFCP PHASE1:Mm9::chr17:32540496..32540535,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320484 | |EntrezGene=320484 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=Q8C2K5,D3Z6Z7,Q8CAS7 | |UniProt=Q8C2K5,D3Z6Z7,Q8CAS7 | ||
|association_with_transcript=0bp_to_ENSMUST00000063824,ENSMUST00000135560,ENSMUST00000135618,ENSMUST00000136375,ENSMUST00000142203,ENSMUST00000168204,NM_178785,uc008bwu.1,uc008bwv.1,uc008bww.1_5end | |association_with_transcript=0bp_to_ENSMUST00000063824,ENSMUST00000135560,ENSMUST00000135618,ENSMUST00000136375,ENSMUST00000142203,ENSMUST00000168204,NM_178785,uc008bwu.1,uc008bwv.1,uc008bww.1_5end | ||
|cluster_id=chr17:32540496..32540535,- | |||
|description=CAGE_peak_1_at_Rasal3_5end | |description=CAGE_peak_1_at_Rasal3_5end | ||
|id=chr17:32540496..32540535,- | |id=chr17:32540496..32540535,- | ||
|ontology_enrichment_celltype=CL:0000988!6.15e-12!32;CL:0002032!6.15e-12!32;CL:0000037!6.15e-12!32;CL:0000566!6.15e-12!32;CL:0000837!6.15e-12!32;CL:0002031!5.36e-10!25;CL:0000738!2.95e-09!17;CL:0002087!2.95e-09!17;CL:0000838!1.13e-08!12;CL:0000084!4.51e-08!11;CL:0000827!4.51e-08!11;CL:0000542!1.40e-07!13;CL:0000051!1.40e-07!13;CL:0000791!5.82e-07!9;CL:0000789!5.82e-07!9;CL:0002420!5.82e-07!9;CL:0002419!5.82e-07!9;CL:0000790!5.82e-07!9 | |ontology_enrichment_celltype=CL:0000988!6.15e-12!32;CL:0002032!6.15e-12!32;CL:0000037!6.15e-12!32;CL:0000566!6.15e-12!32;CL:0000837!6.15e-12!32;CL:0002031!5.36e-10!25;CL:0000738!2.95e-09!17;CL:0002087!2.95e-09!17;CL:0000838!1.13e-08!12;CL:0000084!4.51e-08!11;CL:0000827!4.51e-08!11;CL:0000542!1.40e-07!13;CL:0000051!1.40e-07!13;CL:0000791!5.82e-07!9;CL:0000789!5.82e-07!9;CL:0002420!5.82e-07!9;CL:0002419!5.82e-07!9;CL:0000790!5.82e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.95e-14,32;CL:0002032,5.95e-14,32;CL:0000037,5.95e-14,32;CL:0000837,5.95e-14,32;CL:0002031,1.06e-11,25;CL:0000738,1.81e-10,17;CL:0002087,1.81e-10,17;CL:0000838,8.96e-10,12;CL:0000084,4.41e-09,11;CL:0000827,4.41e-09,11;CL:0000542,1.55e-08,13;CL:0000051,1.55e-08,13;CL:0002320,2.57e-08,46;CL:0000134,2.57e-08,46;CL:0000791,8.40e-08,9;CL:0000789,8.40e-08,9;CL:0002420,8.40e-08,9;CL:0002419,8.40e-08,9;CL:0000790,8.40e-08,9;CL:0000624,5.04e-07,8;CL:0000049,6.51e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.67e-21!48;UBERON:0002390!2.17e-19!45;UBERON:0003061!2.17e-19!45;UBERON:0002405!3.85e-15!70;UBERON:0004177!8.86e-12!29;UBERON:0003408!1.16e-09!24;UBERON:0002370!2.46e-09!23;UBERON:0000974!2.46e-09!23;UBERON:0004807!2.46e-09!23;UBERON:0005058!2.46e-09!23;UBERON:0003351!2.46e-09!23;UBERON:0009113!2.46e-09!23;UBERON:0003295!2.46e-09!23;UBERON:0009722!2.46e-09!23;UBERON:0005562!2.46e-09!23;UBERON:0007690!2.46e-09!23;UBERON:0003081!2.65e-09!88;UBERON:0002371!2.07e-08!16;UBERON:0006562!2.71e-08!24;UBERON:0001557!2.71e-08!24;UBERON:0001042!2.71e-08!24;UBERON:0008814!2.71e-08!24;UBERON:0009145!2.71e-08!24;UBERON:0001474!1.44e-07!22;UBERON:0004765!1.44e-07!22;UBERON:0001434!1.44e-07!22;UBERON:0005057!2.70e-07!51;UBERON:0001004!9.58e-07!42 | |ontology_enrichment_uberon=UBERON:0002193!6.67e-21!48;UBERON:0002390!2.17e-19!45;UBERON:0003061!2.17e-19!45;UBERON:0002405!3.85e-15!70;UBERON:0004177!8.86e-12!29;UBERON:0003408!1.16e-09!24;UBERON:0002370!2.46e-09!23;UBERON:0000974!2.46e-09!23;UBERON:0004807!2.46e-09!23;UBERON:0005058!2.46e-09!23;UBERON:0003351!2.46e-09!23;UBERON:0009113!2.46e-09!23;UBERON:0003295!2.46e-09!23;UBERON:0009722!2.46e-09!23;UBERON:0005562!2.46e-09!23;UBERON:0007690!2.46e-09!23;UBERON:0003081!2.65e-09!88;UBERON:0002371!2.07e-08!16;UBERON:0006562!2.71e-08!24;UBERON:0001557!2.71e-08!24;UBERON:0001042!2.71e-08!24;UBERON:0008814!2.71e-08!24;UBERON:0009145!2.71e-08!24;UBERON:0001474!1.44e-07!22;UBERON:0004765!1.44e-07!22;UBERON:0001434!1.44e-07!22;UBERON:0005057!2.70e-07!51;UBERON:0001004!9.58e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.45e-25,48;UBERON:0002405,3.45e-25,48;UBERON:0002390,2.00e-23,45;UBERON:0003061,2.00e-23,45;UBERON:0004177,1.52e-14,29;UBERON:0005057,1.52e-14,29;UBERON:0003408,4.49e-12,24;UBERON:0002370,1.06e-11,23;UBERON:0000974,1.06e-11,23;UBERON:0004807,1.06e-11,23;UBERON:0005058,1.06e-11,23;UBERON:0003351,1.06e-11,23;UBERON:0009113,1.06e-11,23;UBERON:0003295,1.06e-11,23;UBERON:0009722,1.06e-11,23;UBERON:0005562,1.06e-11,23;UBERON:0007690,1.06e-11,23;UBERON:0000077,5.38e-11,35;UBERON:0006562,9.04e-11,24;UBERON:0001557,9.04e-11,24;UBERON:0001042,9.04e-11,24;UBERON:0008814,9.04e-11,24;UBERON:0009145,9.04e-11,24;UBERON:0002371,1.80e-09,16;UBERON:0003081,1.81e-09,87;UBERON:0001474,6.21e-09,22;UBERON:0004765,6.21e-09,22;UBERON:0001434,6.21e-09,22;UBERON:0001004,1.79e-08,42;UBERON:0000072,1.87e-08,27;UBERON:0002384,2.57e-08,46;UBERON:0000065,3.99e-08,41;UBERON:0002204,5.99e-07,32 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,172.121390147621,37.4498000923434,43.0678728432468,24.1417335197962,27.6809391713817,199.448850369855,249.760089711076,13.9906099962578,13.3633676477285,4.19737126876888,83.7552049026121,76.7840828192137,73.4194097610592,6.4632900514813,44.7802189915993,37.6127696360067,14.2393256286132,12.6175104586944,0,0.430761996159075,0,1.90023419456374,2.01624103807945,1.33038306393183,0.635030673459631,0,0,0,0,0.204169356262369,27.6230876286359,15.626706890476,25.6526634547161,24.1174910092716,23.2235464885872,30.5871522409627,0,0,0,0,0,0,0,0.139986421625363,0,76.34108575627,161.030395526518,149.897834417539,0,1.14613375975503,1.03134418455488,0,2.11596391708813,0,0,0,21.1476433561129,16.8107281636386,22.7353636782752,11.9840044207362,11.1423308543251,0.103689612308478,0.135005938331691,0,0.571301968807607,0.441737081903227,0.857435594504678,0.479227355091182,0.919218786610021,0,1.53224805702225,1.0752457327937,0.263772575460388,0.274462930807229,0,1.11673199600552,1.68828783009504,1.37518422999129,1.47314292736834,0.996601765593721,0,1.4387976733305,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,4.35377702408431,0,0,0,0,0,0,0,0,0,0,5.709193985953,48.9392600093155,4.60170631100957,0.346970653532272,0,0,0.150722640552623,0.23517741427141,1.38233250462643,0.247194967734374,2.16899035379867,14.153768831198,1.94120219936891,6.62524555381181,7.75800405016355,5.59175283654366,0,0.41889341362691,6.13096932500619,25.6404366442669,17.9970819298022,24.5245538251015,1.19832511523858,2.28750301409313,0.251308704225729,1.56441888173049,0.767146371990992,1.24672826735736,1.29793010454206,0.305518091550949,7.96204611904595,1.51633655060205,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.468508622798644,0.776110112217047,0.215567992932842,0.567318240503458,0.175951124163949,1.7535658594206,0.556094498451196,0.348252166522167,1.23469281844766,0,18.2575428701441,16.4702660553418,17.0498099637356,0.828503090142008,0.703578179943289,0.36012412292203,0.710234206755631,0.196764231747404,0.308534225774757,0,0.268273401399619,0.934122738937356,0.16455984991348,0.492502392237286,0.972825714550269,1.46199987425332,2.19550115291051,0.939444931322602,1.68231958851302,0.205809224758569,6.60837565967596,2.11560453330835,0.213288250535234,0.464473343720877,1.03093969057675,1.00841762311671,1.11189021922435,0.570676878337677,2.37264530772256,0.329397909448022,3.01602250560323,1.79060824837036,1.75467678407208,2.69645822596266,1.29682829924817,1.39398891278057,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.379419222745544,0.590440591918409,0.470996183524124,0.493588655687202,1.1858105083486,2.16898637430922,2.55526693647164,1.12431056192427,1.62288097110802,2.894125917029,2.5462585178142,4.02774592431135,2.7562988551756,1.37280706594041,0,0.744281895337007,1.5601883655728,1.01031551178845,0.358794827043824,0.482443521363367,7.02062122633098,0.37898282354097,0.977789858652155,0.509235257325564,0.234690248288502,2.51259386162724,0.476087281772027,1.36593553500459,2.36452716159286,3.76489972402917,3.50800491046472,8.02930242107116,10.5337838938196,6.79850575333104,37.6978209848181,16.86107619838,5.90117127622843,4.69092468718045,1.9266070798535,1.05490517932983,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.60660658210904,1.13552068166615,1.06839362200353,0.162886959353576,1.48473110675282,0,1.21390318077491,0.604647113929502,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,1.45413491791002,0.712994756769443,5.37262488490887,1.05418608574999,2.06271086496374,0,0.18006109403131,0.258717367565509,0,0.354680467284547,0.535106452806212,0.658196082408484,0.608929898229199,0.23467170806371,0,0.882113592219848,0.49465875882444,0.807322133479528,0.241251699712623,0.596861720015682,0.328281799490123,3.20628920292836,1.66882771809459,28.3645662124435,6.60437977482312,7.40778109478847,8.2882121082064,16.403307326523,27.6821589579892,32.1259232688387,35.2677659855618,32.8915937654529,1.90934123603023,0.158167996790568,1.01659733563424,0.216010681643603,0.209088296014469,0.655087691238533,0.539457385539283,0.909188012978695,0.785267825952089,1.55537967950151,6.83473244395618,1.12738587736838,0,0.165458490457098,0.388902376688095,1.03327858782185,0.675824501963113,0.58678619322877,0.5208175393758,0.629156066554265,0,0,115.976081270541,12.9744137785705,24.6506297195585,37.5471178405828,54.6031421785818,75.4989148168807,90.2667825894966,84.3307200166836,91.677536552918,86.8757595866998,94.5749616583564,107.008753052248,120.457225733692,138.499129085159,0,0,0,0,1.15913756419314,2.064507229963,2.56412273974171,1.2862102744744,2.00628841614145,1.12950368523413,0.460325236507177,1.71868654031819,0.859265911718438,0,1.5107877947794,2.70009000092722,0.45032120322422,1.35942722695261,1.55328093525546,0.103787347584177,0.798049746802062,0.853668028770671,1.21553358534147,0.628839487883947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| 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| ||
|short_description=p1@Rasal3 | |short_description=p1@Rasal3 | ||
}} | }} |
Latest revision as of 06:20, 26 September 2015
Short description: | p1@Rasal3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rasal3_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000063824, ENSMUST00000135560, ENSMUST00000135618, ENSMUST00000136375, ENSMUST00000142203, ENSMUST00000168204, NM_178785, uc008bwu.1, uc008bwv.1, uc008bww.1_5end |
EntrezGene: | Rasal3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.95e-14 | 32 |
hematopoietic oligopotent progenitor cell | 5.95e-14 | 32 |
hematopoietic stem cell | 5.95e-14 | 32 |
hematopoietic multipotent progenitor cell | 5.95e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.06e-11 | 25 |
leukocyte | 1.81e-10 | 17 |
nongranular leukocyte | 1.81e-10 | 17 |
lymphoid lineage restricted progenitor cell | 8.96e-10 | 12 |
T cell | 4.41e-09 | 11 |
pro-T cell | 4.41e-09 | 11 |
lymphocyte | 1.55e-08 | 13 |
common lymphoid progenitor | 1.55e-08 | 13 |
connective tissue cell | 2.57e-08 | 46 |
mesenchymal cell | 2.57e-08 | 46 |
mature alpha-beta T cell | 8.40e-08 | 9 |
alpha-beta T cell | 8.40e-08 | 9 |
immature T cell | 8.40e-08 | 9 |
mature T cell | 8.40e-08 | 9 |
immature alpha-beta T cell | 8.40e-08 | 9 |
CD4-positive, alpha-beta T cell | 5.04e-07 | 8 |
common myeloid progenitor | 6.51e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.45e-25 | 48 |
immune system | 3.45e-25 | 48 |
hematopoietic system | 2.00e-23 | 45 |
blood island | 2.00e-23 | 45 |
hemopoietic organ | 1.52e-14 | 29 |
immune organ | 1.52e-14 | 29 |
gland of gut | 4.49e-12 | 24 |
thymus | 1.06e-11 | 23 |
neck | 1.06e-11 | 23 |
respiratory system epithelium | 1.06e-11 | 23 |
hemolymphoid system gland | 1.06e-11 | 23 |
pharyngeal epithelium | 1.06e-11 | 23 |
thymic region | 1.06e-11 | 23 |
pharyngeal gland | 1.06e-11 | 23 |
entire pharyngeal arch endoderm | 1.06e-11 | 23 |
thymus primordium | 1.06e-11 | 23 |
early pharyngeal endoderm | 1.06e-11 | 23 |
mixed endoderm/mesoderm-derived structure | 5.38e-11 | 35 |
pharynx | 9.04e-11 | 24 |
upper respiratory tract | 9.04e-11 | 24 |
chordate pharynx | 9.04e-11 | 24 |
pharyngeal arch system | 9.04e-11 | 24 |
pharyngeal region of foregut | 9.04e-11 | 24 |
bone marrow | 1.80e-09 | 16 |
lateral plate mesoderm | 1.81e-09 | 87 |
bone element | 6.21e-09 | 22 |
skeletal element | 6.21e-09 | 22 |
skeletal system | 6.21e-09 | 22 |
respiratory system | 1.79e-08 | 42 |
segment of respiratory tract | 1.87e-08 | 27 |
connective tissue | 2.57e-08 | 46 |
respiratory tract | 3.99e-08 | 41 |
musculoskeletal system | 5.99e-07 | 32 |