FFCP PHASE1:Mm9::chr6:48689038..48689095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16205 | |EntrezGene=16205 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=122 | |MCL_coexpression_id=122 | ||
|TSSclassifier=NA | |||
|UniProt=Q3TFI6,D3YX11,D3YZL2 | |UniProt=Q3TFI6,D3YX11,D3YZL2 | ||
|association_with_transcript=0bp_to_ENSMUST00000054368,ENSMUST00000140054,ENSMUST00000155017,NM_008376,NM_175860,uc009bvp.1,uc009bvq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000054368,ENSMUST00000140054,ENSMUST00000155017,NM_008376,NM_175860,uc009bvp.1,uc009bvq.1_5end | ||
|cluster_id=chr6:48689038..48689095,+ | |||
|description=CAGE_peak_1_at_Gimap1_5end | |description=CAGE_peak_1_at_Gimap1_5end | ||
|id=chr6:48689038..48689095,+ | |id=chr6:48689038..48689095,+ | ||
|ontology_enrichment_celltype=CL:0000838!7.30e-09!12;CL:0000084!3.21e-08!11;CL:0000827!3.21e-08!11;CL:0000542!4.32e-08!13;CL:0000051!4.32e-08!13;CL:0000791!2.81e-07!9;CL:0000789!2.81e-07!9;CL:0002420!2.81e-07!9;CL:0002419!2.81e-07!9;CL:0000790!2.81e-07!9 | |ontology_enrichment_celltype=CL:0000838!7.30e-09!12;CL:0000084!3.21e-08!11;CL:0000827!3.21e-08!11;CL:0000542!4.32e-08!13;CL:0000051!4.32e-08!13;CL:0000791!2.81e-07!9;CL:0000789!2.81e-07!9;CL:0002420!2.81e-07!9;CL:0002419!2.81e-07!9;CL:0000790!2.81e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.91e-09,12;CL:0000084,3.05e-08,11;CL:0000827,3.05e-08,11;CL:0000542,4.11e-08,13;CL:0000051,4.11e-08,13;CL:0000791,2.69e-07,9;CL:0000789,2.69e-07,9;CL:0002420,2.69e-07,9;CL:0002419,2.69e-07,9;CL:0000790,2.69e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.14e-14!128;UBERON:0001555!3.14e-14!128;UBERON:0007026!3.14e-14!128;UBERON:0004119!3.27e-14!130;UBERON:0000925!3.27e-14!130;UBERON:0006595!3.27e-14!130;UBERON:0004921!2.42e-13!126;UBERON:0004185!2.42e-13!126;UBERON:0004177!1.58e-11!29;UBERON:0001004!4.85e-11!42;UBERON:0000065!5.14e-11!41;UBERON:0005911!1.27e-10!69;UBERON:0002370!7.66e-09!23;UBERON:0000974!7.66e-09!23;UBERON:0004807!7.66e-09!23;UBERON:0005058!7.66e-09!23;UBERON:0003351!7.66e-09!23;UBERON:0009113!7.66e-09!23;UBERON:0003295!7.66e-09!23;UBERON:0009722!7.66e-09!23;UBERON:0005562!7.66e-09!23;UBERON:0007690!7.66e-09!23;UBERON:0003408!8.21e-09!24;UBERON:0001041!1.62e-08!92;UBERON:0006562!1.99e-08!24;UBERON:0001557!1.99e-08!24;UBERON:0001042!1.99e-08!24;UBERON:0008814!1.99e-08!24;UBERON:0009145!1.99e-08!24;UBERON:0000077!8.69e-08!97;UBERON:0002193!1.41e-07!48;UBERON:0003081!2.98e-07!88;UBERON:0005057!3.03e-07!51;UBERON:0002048!8.15e-07!14;UBERON:0000117!8.15e-07!14;UBERON:0000171!8.15e-07!14;UBERON:0000170!8.15e-07!14;UBERON:0005597!8.15e-07!14;UBERON:0000118!8.15e-07!14 | |ontology_enrichment_uberon=UBERON:0001007!3.14e-14!128;UBERON:0001555!3.14e-14!128;UBERON:0007026!3.14e-14!128;UBERON:0004119!3.27e-14!130;UBERON:0000925!3.27e-14!130;UBERON:0006595!3.27e-14!130;UBERON:0004921!2.42e-13!126;UBERON:0004185!2.42e-13!126;UBERON:0004177!1.58e-11!29;UBERON:0001004!4.85e-11!42;UBERON:0000065!5.14e-11!41;UBERON:0005911!1.27e-10!69;UBERON:0002370!7.66e-09!23;UBERON:0000974!7.66e-09!23;UBERON:0004807!7.66e-09!23;UBERON:0005058!7.66e-09!23;UBERON:0003351!7.66e-09!23;UBERON:0009113!7.66e-09!23;UBERON:0003295!7.66e-09!23;UBERON:0009722!7.66e-09!23;UBERON:0005562!7.66e-09!23;UBERON:0007690!7.66e-09!23;UBERON:0003408!8.21e-09!24;UBERON:0001041!1.62e-08!92;UBERON:0006562!1.99e-08!24;UBERON:0001557!1.99e-08!24;UBERON:0001042!1.99e-08!24;UBERON:0008814!1.99e-08!24;UBERON:0009145!1.99e-08!24;UBERON:0000077!8.69e-08!97;UBERON:0002193!1.41e-07!48;UBERON:0003081!2.98e-07!88;UBERON:0005057!3.03e-07!51;UBERON:0002048!8.15e-07!14;UBERON:0000117!8.15e-07!14;UBERON:0000171!8.15e-07!14;UBERON:0000170!8.15e-07!14;UBERON:0005597!8.15e-07!14;UBERON:0000118!8.15e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.45e-15,116;UBERON:0001555,5.45e-15,116;UBERON:0007026,5.45e-15,116;UBERON:0004119,6.03e-15,118;UBERON:0000925,6.03e-15,118;UBERON:0006595,6.03e-15,118;UBERON:0004921,4.47e-14,114;UBERON:0004177,1.05e-11,29;UBERON:0005057,1.05e-11,29;UBERON:0001004,2.59e-11,42;UBERON:0000065,2.74e-11,41;UBERON:0005911,8.20e-11,69;UBERON:0000077,5.02e-10,35;UBERON:0001041,2.72e-09,80;UBERON:0002370,5.26e-09,23;UBERON:0000974,5.26e-09,23;UBERON:0004807,5.26e-09,23;UBERON:0005058,5.26e-09,23;UBERON:0003351,5.26e-09,23;UBERON:0009113,5.26e-09,23;UBERON:0003295,5.26e-09,23;UBERON:0009722,5.26e-09,23;UBERON:0005562,5.26e-09,23;UBERON:0007690,5.26e-09,23;UBERON:0003408,5.68e-09,24;UBERON:0006562,1.39e-08,24;UBERON:0001557,1.39e-08,24;UBERON:0001042,1.39e-08,24;UBERON:0008814,1.39e-08,24;UBERON:0009145,1.39e-08,24;UBERON:0002193,7.60e-08,48;UBERON:0002405,7.60e-08,48;UBERON:0003081,6.34e-07,87;UBERON:0002048,7.83e-07,14;UBERON:0000117,7.83e-07,14;UBERON:0000171,7.83e-07,14;UBERON:0000170,7.83e-07,14;UBERON:0005597,7.83e-07,14;UBERON:0000118,7.83e-07,14 | |||
|phase1_expression=0.80074423552397,6.2815573375085,5.91499011206397,10.5862473957391,5.50985302940982,22.6637017081051,26.8654536684855,224.674582788343,140.507144707363,113.521295266167,99.4776395390184,91.5784385266462,207.495284676621,220.56167530313,30.646098087041,42.7222814192533,10.4934281719222,213.725617030206,215.818118495433,181.214381317759,13.436839843869,50.0426394052462,50.9339588820924,46.7177874556748,49.7818139915759,10.9104073181854,15.0766698655676,17.6686410802429,24.5130211098722,14.617747526076,15.7428662565266,0,0,0,21.6638714813456,23.6053196409059,21.2336130512864,0.418531630736908,0,0.523523743973798,2.35292595212406,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,126.172519755418,158.128946958473,104.861265332449,0.257259436035947,0.85960031981627,1.03134418455488,2.22548106945558,0,0.633831403506179,0,0,0,0,0,0,0,2.17748185847803,2.16009501330705,3.78584930432488,3.14216082844184,3.97563373712904,0.367472397644862,2.77951865952885,5.51531271966013,2.20231761998777,3.19218345212969,2.61131106535614,1.31886287730194,2.8361169516747,0.52091337055676,1.95428099300967,1.12552522006336,2.90316670775939,2.94628585473668,2.56269025438385,3.16879057903011,2.57469057332826,0.377857800533928,64.9296454691758,16.3480536626463,0,0,3.24888208723835,1.79210754838934,14.6062196937022,0,0,0,0.281686839553361,0,0,0,0,0,0,14.9580882431969,194.462350619026,14.5473296283528,9.88866362566974,9.74289530598852,11.992005857315,10.2491395575783,8.23120949949934,11.9383261763192,16.3148678704687,14.6045350489111,27.4229271104461,8.7354098971601,19.2132121060542,14.0613823409214,3.72783522436244,2.92780797011547,1.04723353406728,23.2465920239818,13.8985544426868,13.197860081855,6.09937089950711,2.69623150928681,2.28750301409313,0.502617408451458,1.73824320192276,2.30143911597297,3.94797284663164,3.73154905055843,6.41587992256993,18.9098595327341,2.52722758433675,1.68353484709179,2.86264974517948,3.90833577536904,2.52086981727489,3.76762044589288,1.49680298132921,2.562274405697,2.99845518591132,5.43277078551933,0.862271971731369,3.02569728268511,2.28736461413134,3.94552318369635,3.33656699070717,6.268538997399,6.99659263787008,5.7719937377363,2.1066395619397,1.80143534980301,0.284163499395593,9.94203708170409,14.0715635988658,16.3856475929524,16.3353867553795,16.1346670032871,14.0383072727514,15.3472403535269,15.8281306825775,14.3621371111618,16.2914251414346,18.7150909050169,22.6992666728396,20.0293982772705,22.8332119902693,24.1571553768669,3.36463917702604,1.74937841044784,17.1817767151575,21.4204958997471,4.69234151177515,5.80591679651096,14.0465532841082,14.3195302482573,18.902133726814,14.8375988367796,13.7613427847908,12.8465184684728,13.069430857614,10.9426059622633,16.7669114922443,17.0775687644302,11.8875927431082,13.3424653080426,11.1904061562318,9.93962059704641,9.01661885384643,13.0336849821001,13.7706265889014,12.2737684808057,18.8444880630287,13.5801336141234,13.3448918665169,12.0929220643365,6.22550516883013,6.84064933435986,3.14494392181125,4.49724224769707,5.88294352026658,5.54707467430559,7.38414970166117,11.7955416354832,8.91743747262695,6.31491250332587,14.3768206527355,13.7692150637346,9.36113019343682,7.07220858251913,5.56131981917928,5.78932225636041,54.8716974794816,9.28507917675375,19.066902243717,15.1073126339917,22.0608833391192,27.6385324778996,34.992415210244,32.5873191922524,53.7535841402111,49.165161102028,53.5768022689157,58.0076134093713,58.3675238706727,52.9415554408332,0,0,10.8188140064188,11.5893433447988,3.37156238974363,1.87538698547525,0,12.6235463602186,0,0,0,0,0,0,0,0,0,2.57057053137446,7.38088443082997,9.25941139069727,5.86393053672874,6.92874516484649,5.30980553359851,4.37005145078967,7.25576536715402,6.41257271170054,10.9261700365886,11.6825356218692,13.6966995379157,6.90714086007261,9.26893183800275,12.3254335594968,3.16255825724996,2.06271086496374,4.08527526904546,3.24109969256358,3.88076051348264,6.21577401591618,8.51233121482913,5.35106452806212,9.05019613311665,4.87143918583359,11.9682571112492,4.2366414172764,1.10264199027481,4.45192882941996,4.68246837418126,4.52346936961169,2.50681922406587,2.46211349617592,18.3632927076806,3.8939313422207,64.2474511799926,20.432299928359,19.26023084645,29.9505846637459,58.2317410091567,68.6334519619568,42.1546506384761,46.6038336237781,41.1835921937183,4.77335309007557,3.47969592939249,10.5726122905961,7.56037385752609,8.15444354456428,8.7345025498471,4.98998081623837,6.52962300230154,4.4498510137285,6.86959358446502,10.5627683224777,0,3.73791365109947,4.13646226142744,3.50012139019286,4.52059382172059,4.73077151374179,3.63807439801837,2.47388331203505,0.838874755405687,1.20792060413003,1.72818003754719,108.707825496093,28.7869805712033,31.3268419352723,37.9368803095161,45.6518073952078,63.9753962395673,70.4345334187017,75.4693483862089,75.7248374611107,80.0933537944048,81.568383775704,107.398584575207,107.94968632045,117.227532888114,5.44152920676507,0,0,0,5.9888774149979,11.6363134779733,6.59345847362154,2.78678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|short_description=p1@Gimap1 | |short_description=p1@Gimap1 | ||
}} | }} |
Latest revision as of 07:48, 27 September 2015
Short description: | p1@Gimap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gimap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 0bp_to_ENSMUST00000054368, ENSMUST00000140054, ENSMUST00000155017, NM_008376, NM_175860, uc009bvp.1, uc009bvq.1_5end |
EntrezGene: | Gimap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.91e-09 | 12 |
T cell | 3.05e-08 | 11 |
pro-T cell | 3.05e-08 | 11 |
lymphocyte | 4.11e-08 | 13 |
common lymphoid progenitor | 4.11e-08 | 13 |
mature alpha-beta T cell | 2.69e-07 | 9 |
alpha-beta T cell | 2.69e-07 | 9 |
immature T cell | 2.69e-07 | 9 |
mature T cell | 2.69e-07 | 9 |
immature alpha-beta T cell | 2.69e-07 | 9 |