FFCP PHASE1:Hg19::chr2:97202451..97202462,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:97202451..97202462,+
|short_description=p2@ARID5A
|description=CAGE_peak_2_at_ARID5A_5end
|association_with_transcript=-1bp_to_NM_212481,uc002swe.2,uc002sw...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10865 | |EntrezGene=10865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17361 | |HGNC=17361 | ||
|TSSclassifier=strong | |||
|UniProt=Q03989 | |UniProt=Q03989 | ||
|association_with_transcript=-1bp_to_NM_212481,uc002swe.2,uc002swf.2,uc002swg.2,uc010yuq.1_5end | |||
|cluster_id=chr2:97202451..97202462,+ | |||
|description=CAGE_peak_2_at_ARID5A_5end | |||
|id=chr2:97202451..97202462,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.90e-44!182;CL:0000037!2.39e-43!172;CL:0000566!2.39e-43!172;CL:0000738!5.40e-41!140;CL:0002032!3.08e-39!165;CL:0000837!3.08e-39!165;CL:0002031!7.88e-34!124;CL:0002087!2.39e-33!119;CL:0000542!1.39e-21!53;CL:0000051!1.39e-21!53;CL:0000838!2.27e-21!52;CL:0000763!6.85e-18!112;CL:0000049!6.85e-18!112;CL:0000134!7.46e-16!358;CL:0000766!2.88e-15!76;CL:0002320!3.57e-15!365;CL:0000557!1.70e-14!71;CL:0000084!3.53e-14!25;CL:0000827!3.53e-14!25;CL:0000219!4.84e-14!390;CL:0000839!1.41e-12!70;CL:0002009!4.28e-12!65;CL:0002057!8.93e-12!42;CL:0000048!1.00e-11!430;CL:0000791!1.01e-11!18;CL:0000789!1.01e-11!18;CL:0002420!1.01e-11!18;CL:0002419!1.01e-11!18;CL:0000790!1.01e-11!18;CL:0000723!1.31e-11!436;CL:0002194!2.39e-11!63;CL:0000576!2.39e-11!63;CL:0000040!2.39e-11!63;CL:0000559!2.39e-11!63;CL:0000034!5.94e-11!444;CL:0002371!5.94e-11!591;CL:0000144!4.19e-10!625;CL:0000860!7.26e-10!45;CL:0000625!1.67e-07!11;CL:0000003!1.73e-07!722;CL:0000945!1.76e-07!24;CL:0000826!1.76e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.34e-15;25!CL:0000542;1.51e-13;53!CL:0000791;8.78e-13;18!CL:0000789;8.78e-13;18!CL:0002419;8.78e-13;18!CL:0002087;8.47e-12;104!CL:0000738;4.80e-10;136!CL:0000988;1.05e-08;177!CL:0000945;2.75e-08;24!CL:0000625;4.48e-08;11!CL:0000576;4.97e-08;48!CL:0000860;1.55e-07;33!CL:0002057;1.55e-07;33!CL:0000766;4.00e-07;69!CL:0000473;5.71e-07;39!CL:0000234;5.71e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.74e-50,177;CL:0000037,4.29e-49,168;CL:0000738,2.80e-47,136;CL:0002032,1.47e-44,161;CL:0000837,1.47e-44,161;CL:0002031,3.66e-39,120;CL:0002087,1.40e-38,115;CL:0000542,2.10e-23,53;CL:0000051,2.10e-23,53;CL:0000838,3.58e-23,52;CL:0000763,8.64e-21,108;CL:0000049,8.64e-21,108;CL:0000766,1.33e-18,72;CL:0000134,1.05e-17,354;CL:0000557,1.68e-17,67;CL:0002320,4.76e-17,361;CL:0000219,1.62e-15,386;CL:0000839,2.45e-15,66;CL:0000084,3.35e-15,25;CL:0000827,3.35e-15,25;CL:0002009,9.05e-15,61;CL:0002194,6.47e-14,59;CL:0000576,6.47e-14,59;CL:0000040,6.47e-14,59;CL:0000559,6.47e-14,59;CL:0000791,1.51e-12,18;CL:0000789,1.51e-12,18;CL:0002420,1.51e-12,18;CL:0002419,1.51e-12,18;CL:0000790,1.51e-12,18;CL:0000048,2.83e-12,427;CL:0000473,3.55e-12,48;CL:0000234,3.55e-12,48;CL:0000723,3.78e-12,433;CL:0000860,4.66e-12,42;CL:0002057,4.66e-12,42;CL:0000034,1.01e-11,441;CL:0000945,4.07e-08,24;CL:0000826,4.07e-08,24;CL:0000625,5.50e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-13;53!CL:0000790;8.78e-13;18!CL:0002057;2.24e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!1.86e-07!51;DOID:0060083!1.86e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.00e-07,51;DOID:0060083,1.00e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-19!102;UBERON:0003061!1.52e-19!102;UBERON:0002193!2.73e-18!112;UBERON:0002384!8.24e-14!375;UBERON:0002371!3.87e-13!80;UBERON:0001474!1.42e-12!86;UBERON:0002405!1.63e-10!115;UBERON:0004765!4.52e-10!101;UBERON:0001434!4.52e-10!101;UBERON:0003081!1.30e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.43e-23,98;UBERON:0003061,5.43e-23,98;UBERON:0002193,2.74e-21,108;UBERON:0002405,5.20e-17,93;UBERON:0002384,7.38e-16,371;UBERON:0002371,8.26e-16,76;UBERON:0001474,5.48e-15,82;UBERON:0004765,3.89e-13,90;UBERON:0001434,8.71e-11,100;UBERON:0003081,7.57e-10,203 | |||
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| ||
|short_description=p2@ARID5A | |||
}} | }} |
Latest revision as of 01:14, 19 September 2015
Short description: | p2@ARID5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARID5A_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_212481, uc002swe.2, uc002swf.2, uc002swg.2, uc010yuq.1_5end |
EntrezGene: | ARID5A |
HGNC: | 17361 |
UniProt: | Q03989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.43e-23 | 98 |
blood island | 5.43e-23 | 98 |
hemolymphoid system | 2.74e-21 | 108 |
immune system | 5.20e-17 | 93 |
connective tissue | 7.38e-16 | 371 |
bone marrow | 8.26e-16 | 76 |
bone element | 5.48e-15 | 82 |
skeletal element | 3.89e-13 | 90 |
skeletal system | 8.71e-11 | 100 |
lateral plate mesoderm | 7.57e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.00e-07 | 51 |
immune system cancer | 1.00e-07 | 51 |