FFCP PHASE1:Hg19::chr3:31574452..31574476,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:31574452..31574476,+
|short_description=p2@STT3B
|description=CAGE_peak_2_at_STT3B_5end
|association_with_transcript=0bp_to_ENST00000423527_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201595 | |EntrezGene=201595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30611 | |HGNC=30611 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000423527_5end | |||
|cluster_id=chr3:31574452..31574476,+ | |||
|description=CAGE_peak_2_at_STT3B_5end | |||
|id=chr3:31574452..31574476,+ | |||
|ontology_enrichment_celltype=CL:0000134!5.24e-21!358;CL:0002320!8.24e-20!365;CL:0000037!3.36e-19!172;CL:0000566!3.36e-19!172;CL:0000738!1.01e-18!140;CL:0000988!2.40e-17!182;CL:0002031!3.65e-17!124;CL:0002032!8.32e-17!165;CL:0000837!8.32e-17!165;CL:0000048!1.43e-16!430;CL:0002087!4.84e-16!119;CL:0000034!5.35e-16!444;CL:0000723!6.64e-16!436;CL:0000219!1.38e-15!390;CL:0000766!7.89e-10!76;CL:0000838!1.76e-09!52;CL:0000542!3.54e-09!53;CL:0000051!3.54e-09!53;CL:0000557!3.54e-09!71;CL:0000084!3.55e-09!25;CL:0000827!3.55e-09!25;CL:0000839!8.50e-09!70;CL:0000763!1.61e-08!112;CL:0000049!1.61e-08!112;CL:0000791!1.85e-08!18;CL:0000789!1.85e-08!18;CL:0002420!1.85e-08!18;CL:0002419!1.85e-08!18;CL:0000790!1.85e-08!18;CL:0002194!4.49e-07!63;CL:0000576!4.49e-07!63;CL:0000040!4.49e-07!63;CL:0000559!4.49e-07!63;CL:0002009!8.48e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.42e-09;25!CL:0000791;1.94e-08;18!CL:0000789;1.94e-08;18!CL:0002419;1.94e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,3.80e-21,354;CL:0002320,6.15e-20,361;CL:0000037,1.09e-18,168;CL:0000738,3.06e-18,136;CL:0000988,2.58e-17,177;CL:0002031,1.06e-16,120;CL:0000048,1.46e-16,427;CL:0002032,2.58e-16,161;CL:0000837,2.58e-16,161;CL:0000034,5.56e-16,441;CL:0000723,6.85e-16,433;CL:0000219,1.13e-15,386;CL:0002087,1.38e-15,115;CL:0000838,1.76e-09,52;CL:0000766,2.02e-09,72;CL:0000542,3.54e-09,53;CL:0000051,3.54e-09,53;CL:0000084,3.55e-09,25;CL:0000827,3.55e-09,25;CL:0000557,8.98e-09,67;CL:0000791,1.85e-08,18;CL:0000789,1.85e-08,18;CL:0002420,1.85e-08,18;CL:0002419,1.85e-08,18;CL:0000790,1.85e-08,18;CL:0000839,2.15e-08,66;CL:0000763,4.09e-08,108;CL:0000049,4.09e-08,108 | |||
|ontology_enrichment_development_v019=CL:0000790;1.94e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.64e-20!375;UBERON:0002390!2.10e-11!102;UBERON:0003061!2.10e-11!102;UBERON:0002193!1.14e-09!112;UBERON:0001474!1.72e-09!86;UBERON:0002405!2.29e-09!115;UBERON:0004765!2.80e-09!101;UBERON:0001434!2.80e-09!101;UBERON:0002371!1.08e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.76e-20,371;UBERON:0002390,5.65e-11,98;UBERON:0003061,5.65e-11,98;UBERON:0002193,2.99e-09,108;UBERON:0001474,4.47e-09,82;UBERON:0004765,5.06e-09,90;UBERON:0001434,1.23e-08,100;UBERON:0002371,2.76e-08,76;UBERON:0002405,4.78e-08,93 | |||
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10.8993287383099 | ||
|short_description=p2@STT3B | |||
}} | }} |
Latest revision as of 22:40, 17 September 2015
Short description: | p2@STT3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STT3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423527_5end |
EntrezGene: | STT3B |
HGNC: | 30611 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 3.80e-21 | 354 |
connective tissue cell | 6.15e-20 | 361 |
hematopoietic stem cell | 1.09e-18 | 168 |
leukocyte | 3.06e-18 | 136 |
hematopoietic cell | 2.58e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.06e-16 | 120 |
multi fate stem cell | 1.46e-16 | 427 |
hematopoietic oligopotent progenitor cell | 2.58e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.58e-16 | 161 |
stem cell | 5.56e-16 | 441 |
somatic stem cell | 6.85e-16 | 433 |
motile cell | 1.13e-15 | 386 |
nongranular leukocyte | 1.38e-15 | 115 |
lymphoid lineage restricted progenitor cell | 1.76e-09 | 52 |
myeloid leukocyte | 2.02e-09 | 72 |
lymphocyte | 3.54e-09 | 53 |
common lymphoid progenitor | 3.54e-09 | 53 |
T cell | 3.55e-09 | 25 |
pro-T cell | 3.55e-09 | 25 |
granulocyte monocyte progenitor cell | 8.98e-09 | 67 |
mature alpha-beta T cell | 1.85e-08 | 18 |
alpha-beta T cell | 1.85e-08 | 18 |
immature T cell | 1.85e-08 | 18 |
mature T cell | 1.85e-08 | 18 |
immature alpha-beta T cell | 1.85e-08 | 18 |
myeloid lineage restricted progenitor cell | 2.15e-08 | 66 |
myeloid cell | 4.09e-08 | 108 |
common myeloid progenitor | 4.09e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.76e-20 | 371 |
hematopoietic system | 5.65e-11 | 98 |
blood island | 5.65e-11 | 98 |
hemolymphoid system | 2.99e-09 | 108 |
bone element | 4.47e-09 | 82 |
skeletal element | 5.06e-09 | 90 |
skeletal system | 1.23e-08 | 100 |
bone marrow | 2.76e-08 | 76 |
immune system | 4.78e-08 | 93 |