FFCP PHASE1:Hg19::chr4:6919401..6919404,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:6919401..6919404,-
|short_description=p@chr4:6919401..6919404,-
|description=CAGE_peak_at_chr4:6919401..6919404,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:6919401..6919404,- | |||
|coexpression_cluster_id=C4423 | |||
|description=CAGE_peak_at_chr4:6919401..6919404,- | |||
|id=chr4:6919401..6919404,- | |||
|ontology_enrichment_celltype=CL:0000766!7.90e-10!76;CL:0000557!7.99e-10!71;CL:0000763!1.51e-08!112;CL:0000049!1.51e-08!112;CL:0000839!5.69e-08!70;CL:0002274!3.90e-07!5;CL:0000457!3.90e-07!5;CL:0002191!3.90e-07!5;CL:0000097!3.90e-07!5;CL:0000831!3.90e-07!5;CL:0002028!3.90e-07!5;CL:0002009!4.36e-07!65 | |||
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|ontology_enrichment_development_v019=UBERON:0006241;2.77e-12;3!UBERON:0003057;2.77e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr4:6919401..6919404,- | |||
}} | }} |
Latest revision as of 06:10, 30 July 2015
Short description: | p@chr4:6919401..6919404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:6919401..6919404, - |
Coexpression cluster: | C4423_Neutrophils_Mast_immature_Whole_Eosinophils_placenta_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.08e-18 | 2 |
immature CD1a-positive Langerhans cell | 8.08e-18 | 2 |
mast cell | 4.25e-16 | 5 |
basophil mast progenitor cell | 4.25e-16 | 5 |
neutrophil | 1.15e-12 | 3 |
granulocyte | 2.57e-10 | 8 |
endocrine cell | 3.56e-09 | 9 |
Langerhans cell | 1.15e-07 | 5 |
blood cell | 1.25e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 2.04e-17 | 2 |
pallidum | 2.04e-17 | 2 |
blood | 7.83e-14 | 15 |
haemolymphatic fluid | 7.83e-14 | 15 |
organism substance | 7.83e-14 | 15 |
spinal cord | 3.01e-12 | 3 |
dorsal region element | 3.01e-12 | 3 |
dorsum | 3.01e-12 | 3 |
adult organism | 9.44e-12 | 114 |
neural tube | 2.19e-10 | 56 |
neural rod | 2.19e-10 | 56 |
future spinal cord | 2.19e-10 | 56 |
neural keel | 2.19e-10 | 56 |
hematopoietic system | 4.14e-10 | 98 |
blood island | 4.14e-10 | 98 |
regional part of diencephalon | 4.59e-09 | 4 |
hemolymphoid system | 5.38e-09 | 108 |
basal ganglion | 8.08e-09 | 9 |
nuclear complex of neuraxis | 8.08e-09 | 9 |
aggregate regional part of brain | 8.08e-09 | 9 |
collection of basal ganglia | 8.08e-09 | 9 |
cerebral subcortex | 8.08e-09 | 9 |
neural nucleus | 9.49e-09 | 9 |
nucleus of brain | 9.49e-09 | 9 |
limbic system | 1.55e-07 | 5 |
central nervous system | 9.93e-07 | 81 |
neural plate | 9.93e-07 | 82 |
presumptive neural plate | 9.93e-07 | 82 |