FFCP PHASE1:Hg19::chr5:125831957..125831960,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:125831957..125831960,+
|short_description=p@chr5:125831957..125831960,+
|description=CAGE_peak_at_chr5:125831957..125831960,+
|association_with_transcript=...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:125831957..125831960,+ | |||
|description=CAGE_peak_at_chr5:125831957..125831960,+ | |||
|id=chr5:125831957..125831960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;4.15e-22;6!CL:0000098;4.15e-22;6!CL:0002167;4.15e-22;6!CL:0002615;1.28e-11;3!CL:0002580;1.28e-11;3!CL:0002334;7.30e-11;12!CL:0000222;2.44e-09;1!CL:0002581;2.44e-09;1!CL:0000710;9.69e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.31e-22,6;CL:0000098,2.31e-22,6;CL:0002167,2.31e-22,6;CL:0002615,9.83e-12,3;CL:0002580,2.08e-11,3;CL:0002334,1.14e-10,12;CL:0002581,2.16e-09,1;CL:0000710,8.20e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-20!57;UBERON:0005068!1.01e-20!57;UBERON:0006241!1.01e-20!57;UBERON:0007135!1.01e-20!57;UBERON:0005743!2.07e-19!86;UBERON:0002616!2.96e-19!59;UBERON:0001017!9.65e-19!82;UBERON:0002020!1.87e-18!34;UBERON:0003528!1.87e-18!34;UBERON:0003075!1.11e-17!86;UBERON:0007284!1.11e-17!86;UBERON:0002791!3.31e-17!33;UBERON:0000955!1.41e-16!69;UBERON:0006238!1.41e-16!69;UBERON:0001893!1.68e-16!34;UBERON:0000073!2.39e-16!94;UBERON:0001016!2.39e-16!94;UBERON:0002346!2.48e-16!90;UBERON:0002780!1.44e-15!41;UBERON:0001890!1.44e-15!41;UBERON:0006240!1.44e-15!41;UBERON:0007023!3.08e-15!115;UBERON:0003080!5.09e-15!42;UBERON:0001869!2.11e-14!32;UBERON:0002619!7.48e-13!22;UBERON:0001950!2.16e-12!20;UBERON:0003056!1.35e-11!61;UBERON:0004121!6.12e-11!169;UBERON:0000956!8.07e-11!25;UBERON:0000203!8.07e-11!25;UBERON:0000924!2.37e-10!173;UBERON:0006601!2.37e-10!173;UBERON:0000033!2.56e-10!123;UBERON:0002420!3.08e-10!9;UBERON:0007245!3.08e-10!9;UBERON:0010009!3.08e-10!9;UBERON:0010011!3.08e-10!9;UBERON:0000454!3.08e-10!9;UBERON:0002308!4.95e-10!9;UBERON:0000125!4.95e-10!9;UBERON:0000153!2.65e-09!129;UBERON:0007811!2.65e-09!129;UBERON:0009663!1.87e-07!7;UBERON:0003076!5.63e-07!15;UBERON:0003057!5.63e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;2.03e-14;9!UBERON:0000125;2.03e-14;9!UBERON:0007245;2.03e-14;9!UBERON:0002308;2.03e-14;9!UBERON:0010009;2.03e-14;9!UBERON:0010011;2.03e-14;9!UBERON:0000454;2.03e-14;9!UBERON:0003528;2.32e-14;34!UBERON:0002020;2.32e-14;34!UBERON:0002791;1.44e-13;32!UBERON:0002780;3.59e-13;41!UBERON:0001890;3.59e-13;41!UBERON:0003688;1.44e-12;6!UBERON:0002358;1.44e-12;6!UBERON:0003684;1.44e-12;6!UBERON:0001178;1.44e-12;6!UBERON:0001869;1.86e-11;32!UBERON:0001893;6.45e-11;34!UBERON:0009663;7.55e-11;7!UBERON:0000073;9.33e-10;53!UBERON:0002616;9.33e-10;53!UBERON:0002038;2.44e-09;1!UBERON:0009661;2.44e-09;1!UBERON:0002950;2.44e-09;1!UBERON:0001891;2.44e-09;1!UBERON:0002619;1.28e-08;22!UBERON:0004457;1.51e-08;9!UBERON:0000042;1.51e-08;9!UBERON:0000310;9.69e-08;10!UBERON:0000956;1.33e-07;25!UBERON:0000203;1.33e-07;25!UBERON:0000349;2.59e-07;5!UBERON:0001443;4.46e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.17e-18,56;UBERON:0005068,3.17e-18,56;UBERON:0006241,3.17e-18,56;UBERON:0007135,3.17e-18,56;UBERON:0003528,3.27e-17,34;UBERON:0002020,3.27e-17,34;UBERON:0000073,3.76e-16,53;UBERON:0002616,3.76e-16,53;UBERON:0002791,1.64e-14,32;UBERON:0002420,2.79e-14,9;UBERON:0007245,2.79e-14,9;UBERON:0010009,2.79e-14,9;UBERON:0010011,2.79e-14,9;UBERON:0000454,2.79e-14,9;UBERON:0002780,3.51e-14,41;UBERON:0001890,3.51e-14,41;UBERON:0003080,3.51e-14,41;UBERON:0006240,3.51e-14,41;UBERON:0000125,3.95e-14,9;UBERON:0002308,3.95e-14,9;UBERON:0001893,1.27e-13,34;UBERON:0003688,1.73e-12,6;UBERON:0002358,1.73e-12,6;UBERON:0003684,1.73e-12,6;UBERON:0001178,1.73e-12,6;UBERON:0000955,4.85e-12,68;UBERON:0006238,4.85e-12,68;UBERON:0001017,7.22e-12,81;UBERON:0003075,7.22e-12,82;UBERON:0007284,7.22e-12,82;UBERON:0001869,3.00e-11,32;UBERON:0002346,3.16e-11,86;UBERON:0009663,1.41e-10,7;UBERON:0001016,1.67e-10,89;UBERON:0003056,3.54e-09,61;UBERON:0002038,5.72e-09,1;UBERON:0009661,5.72e-09,1;UBERON:0002950,5.72e-09,1;UBERON:0001891,5.72e-09,1;UBERON:0009616,5.72e-09,1;UBERON:0010286,5.72e-09,1;UBERON:0010371,6.01e-09,104;UBERON:0002619,9.03e-09,22;UBERON:0007023,4.45e-08,114;UBERON:0000956,9.83e-08,25;UBERON:0000203,9.83e-08,25;UBERON:0000310,1.42e-07,10;UBERON:0000349,1.55e-07,5;UBERON:0001443,6.31e-07,11 | |||
|phase1_expression=0.54503513781167,1.07050261945492,1.12763523276777,0,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0.389748020644795,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,1.66376689224646,3.39015078714607,3.31175071571263,1.52283839490527,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,1.24053903909388,0.61384789315225,1.12264037773229,1.02511319404561,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0.994147647766298,1.68803299692615,0.222617410045812,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,1.52581736317083,0,0,0.658156191461918,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0.687481272035051,0,0.199679000498991,0,0.669514372325618,0,0,0,0,0,0,0.0984274815147488,0,0,1.63444087333891,0,0,0,0.449947783103001,0,0.182248669974074,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,1.29282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.366078794705889,0.1251909307065,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0.829550616910385,0,0,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.798169295285756,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,1.56215619722769,0,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0.339848664884159,0.263091094251396,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0.098150233615243,0,0,0.307988420568741,0,0,0,0,0,0.22589216407792,0.109940516745429,0,0.154348316215889,0.218559560503957,0,0,0,1.57046773691956,0.297046400327086,0.8453114551668,0.339854229375634,0,0,0,0,0,0,0,0,1.00337708206016,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.413731983447581,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.54503513781167,1.07050261945492,1.12763523276777,0,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0.389748020644795,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,1.66376689224646,3.39015078714607,3.31175071571263,1.52283839490527,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,1.24053903909388,0.61384789315225,1.12264037773229,1.02511319404561,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0.994147647766298,1.68803299692615,0.222617410045812,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,1.52581736317083,0,0,0.658156191461918,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0.687481272035051,0,0.199679000498991,0,0.669514372325618,0,0,0,0,0,0,0.0984274815147488,0,0,1.63444087333891,0,0,0,0.449947783103001,0,0.182248669974074,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,1.29282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.366078794705889,0.1251909307065,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0.829550616910385,0,0,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.798169295285756,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,1.56215619722769,0,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0.339848664884159,0.263091094251396,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0.098150233615243,0,0,0.307988420568741,0,0,0,0,0,0.22589216407792,0.109940516745429,0,0.154348316215889,0.218559560503957,0,0,0,1.57046773691956,0.297046400327086,0.8453114551668,0.339854229375634,0,0,0,0,0,0,0,0,1.00337708206016,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.413731983447581,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr5:125831957..125831960,+ | |||
}} | }} |
Latest revision as of 09:16, 30 July 2015
Short description: | p@chr5:125831957..125831960, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:125831957..125831960, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.31e-22 | 6 |
sensory epithelial cell | 2.31e-22 | 6 |
olfactory epithelial cell | 2.31e-22 | 6 |
adipocyte of omentum tissue | 9.83e-12 | 3 |
preadipocyte of the breast | 2.08e-11 | 3 |
preadipocyte | 1.14e-10 | 12 |
perirenal preadipocyte | 2.16e-09 | 1 |
neurecto-epithelial cell | 8.20e-07 | 20 |