FFCP PHASE1:Hg19::chr5:79287060..79287093,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:79287060..79287093,-
|short_description=p1@MTX3
|description=CAGE_peak_1_at_MTX3_5end
|association_with_transcript=0bp_to_ENST00000328496,ENST00000418095,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=345778 | |EntrezGene=345778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24812 | |HGNC=24812 | ||
|TSSclassifier=strong | |||
|UniProt=C9JJ95,C9IYU8,E9PB57,Q5HYI7,Q7Z380 | |UniProt=C9JJ95,C9IYU8,E9PB57,Q5HYI7,Q7Z380 | ||
|association_with_transcript=0bp_to_ENST00000328496,ENST00000418095,ENST00000509852,ENST00000512528,ENST00000512560,NM_001010891,NM_001167741,uc003kge.3,uc003kgg.1,uc010jag.2,uc010jah.2_5end | |||
|cluster_id=chr5:79287060..79287093,- | |||
|description=CAGE_peak_1_at_MTX3_5end | |||
|id=chr5:79287060..79287093,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.38e-10;82 | |||
|ontology_enrichment_disease=DOID:0050687!2.39e-11!143;DOID:305!4.47e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.36e-11,143;DOID:305,4.32e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.10e-27!94;UBERON:0001016!4.10e-27!94;UBERON:0001017!1.29e-25!82;UBERON:0005743!8.94e-25!86;UBERON:0001049!6.22e-23!57;UBERON:0005068!6.22e-23!57;UBERON:0006241!6.22e-23!57;UBERON:0007135!6.22e-23!57;UBERON:0000924!2.65e-22!173;UBERON:0006601!2.65e-22!173;UBERON:0000955!1.81e-21!69;UBERON:0006238!1.81e-21!69;UBERON:0004121!4.06e-21!169;UBERON:0007023!5.46e-21!115;UBERON:0003080!6.49e-20!42;UBERON:0002780!1.33e-19!41;UBERON:0001890!1.33e-19!41;UBERON:0006240!1.33e-19!41;UBERON:0002616!2.05e-19!59;UBERON:0002346!5.08e-19!90;UBERON:0003075!7.85e-18!86;UBERON:0007284!7.85e-18!86;UBERON:0000153!1.06e-17!129;UBERON:0007811!1.06e-17!129;UBERON:0000033!1.21e-17!123;UBERON:0001893!2.73e-16!34;UBERON:0002020!2.85e-16!34;UBERON:0003528!2.85e-16!34;UBERON:0001869!6.11e-16!32;UBERON:0002791!9.83e-16!33;UBERON:0003056!2.68e-14!61;UBERON:0002619!6.42e-13!22;UBERON:0000956!7.24e-13!25;UBERON:0000203!7.24e-13!25;UBERON:0001950!5.35e-12!20;UBERON:0000475!4.51e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.61e-14;32!UBERON:0003528;2.62e-14;34!UBERON:0002020;2.62e-14;34!UBERON:0002780;3.09e-14;41!UBERON:0001890;3.09e-14;41!UBERON:0002791;3.16e-14;32!UBERON:0001893;3.54e-14;34!UBERON:0002619;6.11e-13;22!UBERON:0000956;8.12e-13;25!UBERON:0000203;8.12e-13;25!UBERON:0000073;2.96e-12;53!UBERON:0002616;2.96e-12;53!UBERON:0001950;4.65e-12;20!UBERON:0001017;1.22e-10;75!UBERON:0001016;1.48e-10;83!UBERON:0000955;3.07e-10;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-27,89;UBERON:0001017,2.81e-25,81;UBERON:0001049,1.31e-22,56;UBERON:0005068,1.31e-22,56;UBERON:0006241,1.31e-22,56;UBERON:0007135,1.31e-22,56;UBERON:0004121,1.22e-21,171;UBERON:0000924,1.22e-21,171;UBERON:0006601,1.22e-21,171;UBERON:0000955,3.86e-21,68;UBERON:0006238,3.86e-21,68;UBERON:0000073,6.07e-21,53;UBERON:0002616,6.07e-21,53;UBERON:0007023,1.27e-20,114;UBERON:0002780,1.32e-19,41;UBERON:0001890,1.32e-19,41;UBERON:0003080,1.32e-19,41;UBERON:0006240,1.32e-19,41;UBERON:0002346,2.75e-18,86;UBERON:0003075,4.17e-17,82;UBERON:0007284,4.17e-17,82;UBERON:0011216,4.73e-17,223;UBERON:0001893,2.71e-16,34;UBERON:0003528,2.83e-16,34;UBERON:0002020,2.83e-16,34;UBERON:0001869,6.07e-16,32;UBERON:0002791,1.70e-15,32;UBERON:0003056,1.87e-14,61;UBERON:0010371,1.84e-13,104;UBERON:0002619,6.39e-13,22;UBERON:0000956,7.20e-13,25;UBERON:0000203,7.20e-13,25;UBERON:0010314,4.43e-12,132;UBERON:0001950,5.33e-12,20 | |||
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| ||
|short_description=p1@MTX3 | |||
}} | }} |
Latest revision as of 22:10, 18 September 2015
Short description: | p1@MTX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000328496, ENST00000418095, ENST00000509852, ENST00000512528, ENST00000512560, NM_001010891, NM_001167741, uc003kge.3, uc003kgg.1, uc010jag.2, uc010jah.2_5end |
EntrezGene: | MTX3 |
HGNC: | 24812 |
UniProt: | C9JJ95C9IYU8E9PB57Q5HYI7Q7Z380 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.36e-11 | 143 |
carcinoma | 4.32e-08 | 106 |