FFCP PHASE1:Hg19::chr6:132455180..132455197,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:132455180..132455197,+
|short_description=p2@LOC100507254
|description=CAGE_peak_2_at_LOC100507254_5end
|association_with_transcript=62bp_to_ENST0000045802...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100507254 | |EntrezGene=100507254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_ENST00000458028,NR_038981,uc003qdc.2,uc003qdd.2_5end | |||
|cluster_id=chr6:132455180..132455197,+ | |||
|coexpression_cluster_id=C4560 | |||
|description=CAGE_peak_2_at_LOC100507254_5end | |||
|id=chr6:132455180..132455197,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.29e-65!24;CL:0000115!1.99e-59!35;CL:0000071!1.22e-47!18;CL:0002546!1.22e-47!18;CL:0002078!1.15e-45!44;CL:0000213!1.77e-33!57;CL:0000215!1.77e-33!57;CL:1000413!1.63e-28!9;CL:0000236!1.05e-20!14;CL:0002544!9.31e-20!6;CL:0005020!6.00e-19!6;CL:0002138!6.00e-19!6;CL:0005022!6.00e-19!6;CL:0002543!2.29e-18!6;CL:0000222!3.33e-12!119;CL:0000945!3.72e-11!24;CL:0000826!3.72e-11!24;CL:0000076!1.36e-10!62;CL:0002618!5.15e-10!3;CL:0002545!8.37e-08!2;CL:0000666!1.87e-07!4;CL:0002188!1.87e-07!4;CL:1000612!4.03e-07!7;CL:1000746!4.03e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.70e-104;24!CL:0000115;1.67e-80;36!CL:0000071;2.33e-73;18!CL:0002078;1.20e-48;45!CL:1000413;1.67e-48;9!CL:0000213;2.06e-35;58!CL:0000215;2.06e-35;58!CL:0002544;3.21e-33;6!CL:0002138;9.21e-32;6!CL:0002543;9.26e-31;6!CL:0000236;2.21e-25;13!CL:0002188;2.18e-16;5!CL:0002618;2.67e-16;3!CL:0000945;3.45e-13;24!CL:0002545;2.28e-12;2!CL:0000076;6.20e-12;63!CL:1000746;9.27e-12;7!CL:1000612;9.27e-12;7!CL:0002681;6.56e-07;12!CL:0002584;6.56e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.72e-104,24;CL:0000115,1.27e-94,36;CL:0002078,1.34e-74,45;CL:0000071,2.33e-73,18;CL:0002546,2.33e-73,18;CL:0000213,1.23e-56,58;CL:0000215,1.23e-56,58;CL:1000413,1.86e-48,9;CL:0002544,3.59e-33,6;CL:0005020,9.22e-32,6;CL:0002138,9.22e-32,6;CL:0005022,9.22e-32,6;CL:0002543,9.51e-31,6;CL:0000222,3.10e-24,121;CL:0000236,1.62e-23,14;CL:0000076,1.95e-18,63;CL:0002188,1.97e-16,5;CL:0002618,3.21e-16,3;CL:0000945,3.31e-13,24;CL:0000826,3.31e-13,24;CL:0002545,2.16e-12,2;CL:1000746,8.63e-12,7;CL:1000612,8.63e-12,7;CL:0002321,9.67e-09,250;CL:0000066,1.10e-08,253;CL:0002681,6.30e-07,12;CL:0002584,6.30e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.33e-73;18!CL:0005022;9.21e-32;6!CL:0000222;2.93e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.22e-47!18;UBERON:0004638!1.22e-47!18;UBERON:0004852!1.22e-47!18;UBERON:0000487!4.17e-38!22;UBERON:0006914!5.83e-33!25;UBERON:0003915!1.63e-28!9;UBERON:0004700!1.63e-28!9;UBERON:0001917!1.63e-28!9;UBERON:0000055!5.33e-22!69;UBERON:0002049!2.40e-18!79;UBERON:0007798!2.40e-18!79;UBERON:0004535!3.81e-16!110;UBERON:0001009!1.63e-15!113;UBERON:0002465!1.06e-14!10;UBERON:0001981!4.81e-14!60;UBERON:0007500!4.81e-14!60;UBERON:0004537!4.81e-14!60;UBERON:0006965!4.81e-14!60;UBERON:0001473!5.16e-14!8;UBERON:0004536!5.16e-14!8;UBERON:0006558!5.16e-14!8;UBERON:0001638!5.43e-12!9;UBERON:0003920!5.43e-12!9;UBERON:0004582!5.43e-12!9;UBERON:0003081!4.97e-11!216;UBERON:0004872!1.05e-09!84;UBERON:0003914!4.87e-08!118;UBERON:0005800!8.37e-08!2;UBERON:0001515!8.37e-08!2;UBERON:0000074!4.03e-07!7;UBERON:0001229!4.03e-07!7;UBERON:0001230!4.03e-07!7;UBERON:0005749!4.03e-07!7;UBERON:0004199!4.03e-07!7;UBERON:0004209!4.03e-07!7;UBERON:0004198!4.03e-07!7;UBERON:0002193!6.10e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.33e-73;18!UBERON:0001986;2.33e-73;18!UBERON:0004852;2.33e-73;18!UBERON:0000487;2.19e-59;22!UBERON:0006914;7.75e-52;25!UBERON:0003915;1.67e-48;9!UBERON:0004700;1.67e-48;9!UBERON:0001917;1.67e-48;9!UBERON:0000490;1.91e-35;33!UBERON:0001473;1.06e-23;8!UBERON:0004536;1.06e-23;8!UBERON:0006558;1.06e-23;8!UBERON:0000055;6.90e-21;65!UBERON:0001638;2.38e-20;9!UBERON:0003920;2.38e-20;9!UBERON:0004582;2.38e-20;9!UBERON:0002465;7.45e-19;10!UBERON:0002049;4.25e-14;75!UBERON:0007798;4.25e-14;75!UBERON:0007500;2.13e-13;56!UBERON:0001981;2.13e-13;56!UBERON:0004537;2.13e-13;56!UBERON:0005800;2.28e-12;2!UBERON:0001515;2.28e-12;2!UBERON:0000074;9.27e-12;7!UBERON:0001229;9.27e-12;7!UBERON:0003914;8.97e-11;74!UBERON:0002066;5.48e-10;5!UBERON:0000947;4.63e-09;21!UBERON:0010191;4.63e-09;21!UBERON:0001637;4.84e-09;42!UBERON:0003509;4.84e-09;42!UBERON:0004572;4.84e-09;42!UBERON:0002405;8.94e-09;27!UBERON:0004111;4.63e-08;130!UBERON:0000025;5.22e-08;93!UBERON:0001009;7.04e-08;112!UBERON:0004535;8.67e-08;109!UBERON:0001225;6.56e-07;12!UBERON:0008987;6.56e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.33e-73,18;UBERON:0001986,2.33e-73,18;UBERON:0004852,2.33e-73,18;UBERON:0000487,2.20e-59,22;UBERON:0006914,7.76e-52,25;UBERON:0003915,1.86e-48,9;UBERON:0004700,1.86e-48,9;UBERON:0001917,1.86e-48,9;UBERON:0000055,1.70e-33,68;UBERON:0002049,1.42e-28,78;UBERON:0007798,1.42e-28,78;UBERON:0001473,1.06e-23,8;UBERON:0004536,1.06e-23,8;UBERON:0006558,1.06e-23,8;UBERON:0004535,5.44e-21,109;UBERON:0001638,2.42e-20,9;UBERON:0003920,2.42e-20,9;UBERON:0004582,2.42e-20,9;UBERON:0001009,2.72e-20,112;UBERON:0007500,6.33e-20,59;UBERON:0001981,6.33e-20,59;UBERON:0004537,6.33e-20,59;UBERON:0006965,6.33e-20,59;UBERON:0002465,7.45e-19,10;UBERON:0003914,8.88e-14,117;UBERON:0004872,3.75e-13,83;UBERON:0005800,2.16e-12,2;UBERON:0001515,2.16e-12,2;UBERON:0010532,8.63e-12,7;UBERON:0000074,8.63e-12,7;UBERON:0001229,8.63e-12,7;UBERON:0001230,8.63e-12,7;UBERON:0003220,8.63e-12,7;UBERON:0005749,8.63e-12,7;UBERON:0004199,8.63e-12,7;UBERON:0004209,8.63e-12,7;UBERON:0004198,8.63e-12,7;UBERON:0005103,2.46e-10,8;UBERON:0000083,2.46e-10,8;UBERON:0009201,2.46e-10,8;UBERON:0006553,2.46e-10,8;UBERON:0003074,2.46e-10,8;UBERON:0003060,2.46e-10,8;UBERON:0002066,6.11e-10,5;UBERON:0004111,2.17e-09,240;UBERON:0000080,3.35e-09,9;UBERON:0002120,3.35e-09,9;UBERON:0004875,3.35e-09,9;UBERON:0005721,3.35e-09,9;UBERON:0005754,3.35e-09,9;UBERON:0007297,3.35e-09,9;UBERON:0001637,3.77e-09,42;UBERON:0003509,3.77e-09,42;UBERON:0004572,3.77e-09,42;UBERON:0000947,4.77e-09,21;UBERON:0010191,4.77e-09,21;UBERON:0003081,9.26e-08,203;UBERON:0004876,1.51e-07,11;UBERON:0001225,6.30e-07,12;UBERON:0008987,6.30e-07,12;UBERON:0003887,6.30e-07,12;UBERON:0000490,8.02e-07,148 | |||
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|short_description=p2@LOC100507254 | |||
}} | }} |
Latest revision as of 19:20, 24 September 2015
Short description: | p2@LOC100507254 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100507254_5end |
Coexpression cluster: | C4560_Endothelial_CD19_Lymphatic_CD34_Renal_Fibroblast_basal |
Association with transcript: | 62bp_to_ENST00000458028, NR_038981, uc003qdc.2, uc003qdd.2_5end |
EntrezGene: | LOC100507254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.72e-104 | 24 |
endothelial cell | 1.27e-94 | 36 |
meso-epithelial cell | 1.34e-74 | 45 |
blood vessel endothelial cell | 2.33e-73 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-73 | 18 |
lining cell | 1.23e-56 | 58 |
barrier cell | 1.23e-56 | 58 |
endothelial cell of artery | 1.86e-48 | 9 |
aortic endothelial cell | 3.59e-33 | 6 |
lymphangioblast | 9.22e-32 | 6 |
endothelial cell of lymphatic vessel | 9.22e-32 | 6 |
vascular lymphangioblast | 9.22e-32 | 6 |
vein endothelial cell | 9.51e-31 | 6 |
mesodermal cell | 3.10e-24 | 121 |
B cell | 1.62e-23 | 14 |
squamous epithelial cell | 1.95e-18 | 63 |
glomerular endothelial cell | 1.97e-16 | 5 |
endothelial cell of umbilical vein | 3.21e-16 | 3 |
lymphocyte of B lineage | 3.31e-13 | 24 |
pro-B cell | 3.31e-13 | 24 |
thoracic aorta endothelial cell | 2.16e-12 | 2 |
glomerular cell | 8.63e-12 | 7 |
kidney corpuscule cell | 8.63e-12 | 7 |
embryonic cell | 9.67e-09 | 250 |
epithelial cell | 1.10e-08 | 253 |
kidney cortical cell | 6.30e-07 | 12 |
renal cortical epithelial cell | 6.30e-07 | 12 |