FFCP PHASE1:Hg19::chr6:16238880..16238915,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:16238880..16238915,+
|short_description=p2@GMPR
|description=CAGE_peak_2_at_GMPR_5end
|association_with_transcript=69bp_to_ENST00000259727,NM_006877,uc003n...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2766 | |EntrezGene=2766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4376 | |HGNC=4376 | ||
|TSSclassifier=strong | |||
|UniProt=P36959 | |UniProt=P36959 | ||
|association_with_transcript=69bp_to_ENST00000259727,NM_006877,uc003nbs.2_5end | |||
|cluster_id=chr6:16238880..16238915,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_2_at_GMPR_5end | |||
|id=chr6:16238880..16238915,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.05e-13!119;CL:0002139!3.81e-10!24;CL:0000115!1.39e-08!35;CL:0000071!2.55e-07!18;CL:0002546!2.55e-07!18;CL:0000192!2.63e-07!42;CL:0000514!2.63e-07!42;CL:0000183!2.92e-07!59;CL:0000213!3.16e-07!57;CL:0000215!3.16e-07!57;CL:0000680!6.38e-07!57;CL:0000056!6.38e-07!57;CL:0000355!6.38e-07!57;CL:0000187!6.41e-07!54;CL:0002078!6.98e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.91e-13;24!CL:0000115;1.41e-10;36!CL:0000071;1.63e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.39e-13,24;CL:0000115,7.03e-12,36;CL:0000222,5.79e-10,121;CL:0000071,1.36e-09,18;CL:0002546,1.36e-09,18;CL:0002078,4.04e-08,45;CL:0000213,3.60e-07,58;CL:0000215,3.60e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.63e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-20!115;UBERON:0001009!4.82e-17!113;UBERON:0000055!1.23e-16!69;UBERON:0004111!6.14e-16!241;UBERON:0004535!1.01e-15!110;UBERON:0002049!1.71e-15!79;UBERON:0007798!1.71e-15!79;UBERON:0004872!9.91e-15!84;UBERON:0000025!2.32e-14!194;UBERON:0001981!6.82e-14!60;UBERON:0007500!6.82e-14!60;UBERON:0004537!6.82e-14!60;UBERON:0006965!6.82e-14!60;UBERON:0000477!2.48e-13!286;UBERON:0000483!6.77e-13!309;UBERON:0000119!2.00e-12!312;UBERON:0001637!2.93e-11!42;UBERON:0003509!2.93e-11!42;UBERON:0004572!2.93e-11!42;UBERON:0003914!8.95e-09!118;UBERON:0001049!1.10e-08!57;UBERON:0005068!1.10e-08!57;UBERON:0006241!1.10e-08!57;UBERON:0007135!1.10e-08!57;UBERON:0002385!1.11e-08!63;UBERON:0001015!1.11e-08!63;UBERON:0000383!1.11e-08!63;UBERON:0001134!1.20e-08!61;UBERON:0002036!1.20e-08!61;UBERON:0003082!1.20e-08!61;UBERON:0000490!1.86e-08!138;UBERON:0004573!1.91e-08!33;UBERON:0004571!1.91e-08!33;UBERON:0002616!4.70e-08!59;UBERON:0003075!8.69e-08!86;UBERON:0007284!8.69e-08!86;UBERON:0004290!1.22e-07!70;UBERON:0001986!2.55e-07!18;UBERON:0004638!2.55e-07!18;UBERON:0004852!2.55e-07!18;UBERON:0000914!3.40e-07!83;UBERON:0002329!3.40e-07!83;UBERON:0003077!3.40e-07!83;UBERON:0003059!3.40e-07!83;UBERON:0007282!3.40e-07!83;UBERON:0009618!3.40e-07!83;UBERON:0007285!3.40e-07!83;UBERON:0002346!6.21e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.57e-10;42!UBERON:0003509;6.57e-10;42!UBERON:0004572;6.57e-10;42!UBERON:0000055;1.44e-09;65!UBERON:0004638;1.63e-09;18!UBERON:0001986;1.63e-09;18!UBERON:0004852;1.63e-09;18!UBERON:0007500;9.22e-09;56!UBERON:0001981;9.22e-09;56!UBERON:0004537;9.22e-09;56!UBERON:0004573;1.06e-08;33!UBERON:0004571;1.06e-08;33!UBERON:0000487;1.72e-07;22!UBERON:0002049;4.29e-07;75!UBERON:0007798;4.29e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,8.94e-19,68;UBERON:0007023,3.52e-18,114;UBERON:0001009,3.95e-18,112;UBERON:0004111,5.08e-17,240;UBERON:0004535,1.64e-16,109;UBERON:0004872,2.49e-16,83;UBERON:0007500,4.30e-16,59;UBERON:0001981,4.30e-16,59;UBERON:0004537,4.30e-16,59;UBERON:0006965,4.30e-16,59;UBERON:0002049,8.13e-16,78;UBERON:0007798,8.13e-16,78;UBERON:0000025,1.06e-15,192;UBERON:0001637,7.14e-13,42;UBERON:0003509,7.14e-13,42;UBERON:0004572,7.14e-13,42;UBERON:0000483,9.20e-12,306;UBERON:0000119,2.82e-11,309;UBERON:0003914,2.45e-10,117;UBERON:0004573,1.23e-09,33;UBERON:0004571,1.23e-09,33;UBERON:0004638,1.36e-09,18;UBERON:0001986,1.36e-09,18;UBERON:0004852,1.36e-09,18;UBERON:0001049,1.18e-08,56;UBERON:0005068,1.18e-08,56;UBERON:0006241,1.18e-08,56;UBERON:0007135,1.18e-08,56;UBERON:0000073,5.10e-08,53;UBERON:0002616,5.10e-08,53;UBERON:0003075,9.88e-08,82;UBERON:0007284,9.88e-08,82;UBERON:0000487,1.34e-07,22;UBERON:0010314,2.02e-07,132;UBERON:0003081,8.89e-07,203;UBERON:0002346,9.11e-07,86 | |||
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| ||
|short_description=p2@GMPR | |||
}} | }} |
Latest revision as of 17:33, 16 September 2015
Short description: | p2@GMPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GMPR_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 69bp_to_ENST00000259727, NM_006877, uc003nbs.2_5end |
EntrezGene: | GMPR |
HGNC: | 4376 |
UniProt: | P36959 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.39e-13 | 24 |
endothelial cell | 7.03e-12 | 36 |
mesodermal cell | 5.79e-10 | 121 |
blood vessel endothelial cell | 1.36e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.36e-09 | 18 |
meso-epithelial cell | 4.04e-08 | 45 |
lining cell | 3.60e-07 | 58 |
barrier cell | 3.60e-07 | 58 |