FFCP PHASE1:Hg19::chr6:31939843..31939877,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31939843..31939877,+
|short_description=p4@STK19
|description=CAGE_peak_4_at_STK19_5end
|association_with_transcript=167bp_to_ENST00000492583_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8859 | |EntrezGene=8859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11398 | |HGNC=11398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=167bp_to_ENST00000492583_5end | |||
|cluster_id=chr6:31939843..31939877,+ | |||
|description=CAGE_peak_4_at_STK19_5end | |||
|id=chr6:31939843..31939877,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.72e-13!42;CL:0000860!6.48e-13!45;CL:0000738!4.78e-09!140;CL:0000766!3.86e-08!76;CL:0002009!6.11e-08!65;CL:0000557!1.03e-07!71;CL:0000037!1.88e-07!172;CL:0000566!1.88e-07!172;CL:0000988!2.84e-07!182;CL:0002087!3.13e-07!119;CL:0002194!3.54e-07!63;CL:0000576!3.54e-07!63;CL:0000040!3.54e-07!63;CL:0000559!3.54e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.69e-17;6!CL:0000791;1.14e-11;18!CL:0000789;1.14e-11;18!CL:0002419;1.14e-11;18!CL:0002087;4.20e-09;104!CL:0000898;4.28e-09;3!CL:0000767;4.28e-09;3!CL:0000860;8.44e-09;33!CL:0002057;8.44e-09;33!CL:0000623;9.97e-09;3!CL:0000094;1.74e-08;8!CL:0000081;1.77e-08;11!CL:0000084;6.73e-08;25!CL:0000766;8.52e-08;69!CL:0000473;8.30e-07;39!CL:0000234;8.30e-07;39!CL:0000576;8.35e-07;48!CL:0000815;9.89e-07;2!CL:0000792;9.89e-07;2!CL:0002677;9.89e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.77e-24,136;CL:0000037,1.99e-21,168;CL:0000988,6.35e-21,177;CL:0002087,1.31e-19,115;CL:0002032,5.28e-18,161;CL:0000837,5.28e-18,161;CL:0000624,1.56e-17,6;CL:0002031,2.81e-17,120;CL:0000860,2.97e-13,42;CL:0002057,2.97e-13,42;CL:0000791,6.32e-12,18;CL:0000789,6.32e-12,18;CL:0002420,6.32e-12,18;CL:0002419,6.32e-12,18;CL:0000790,6.32e-12,18;CL:0000766,1.69e-11,72;CL:0000473,4.15e-11,48;CL:0000234,4.15e-11,48;CL:0000838,1.32e-10,52;CL:0000542,2.49e-10,53;CL:0000051,2.49e-10,53;CL:0000898,1.39e-09,3;CL:0000767,4.99e-09,3;CL:0002009,5.15e-09,61;CL:0000557,5.94e-09,67;CL:0000623,7.35e-09,3;CL:0000825,7.35e-09,3;CL:0000763,1.11e-08,108;CL:0000049,1.11e-08,108;CL:0000094,1.62e-08,8;CL:0000081,2.04e-08,11;CL:0000134,2.14e-08,354;CL:0002194,3.89e-08,59;CL:0000576,3.89e-08,59;CL:0000040,3.89e-08,59;CL:0000559,3.89e-08,59;CL:0000084,4.50e-08,25;CL:0000827,4.50e-08,25;CL:0002320,5.23e-08,361;CL:0000219,3.37e-07,386;CL:0000815,5.50e-07,2;CL:0000792,5.50e-07,2;CL:0002677,5.50e-07,2;CL:0000839,6.50e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;1.14e-11;18!CL:0002057;6.52e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.41e-07!80;UBERON:0002405!4.05e-07!115;UBERON:0002193!5.11e-07!112;UBERON:0002390!6.45e-07!102;UBERON:0003061!6.45e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.02e-10,98;UBERON:0003061,7.02e-10,98;UBERON:0002371,2.06e-09,76;UBERON:0002384,1.22e-08,371;UBERON:0002193,1.88e-08,108;UBERON:0001474,2.16e-08,82;UBERON:0002405,8.60e-08,93;UBERON:0004765,2.97e-07,90 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,2.53299878168311,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,0,0.331397375727916,0,0,0.730310090387373,0,0.61560529038394,0.204000691244253,0.940364164434263,0.286235987131057,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,2.36018566109342,1.15148819429164,1.54816123316076,0,0,0.739508020333575,0.154934401160603,0,1.17440175733939,0.553995408531877,1.20326668482085,3.25516306073778,0,0,0,0.436194716338694,0,0.485168122375632,0.697287110717054,1.6446715520873,0.929119112685311,2.01384674625505,0.512321413058201,0.236482229888585,2.06847408441971,1.93645405075148,5.41705946377367,0,0.272906150057846,0,1.53041946185451,0.641858054152187,2.55734850319616,0,0.797854630486527,0.426224750532694,1.7412554317715,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,0.868755378820466,1.81619850790011,0.368277635987565,1.58231193720442,0.633765858935825,1.06302149982522,0.209658645508376,0.44931452458598,0.450530678524519,0.16072558669708,1.42506371870624,0.39783335439818,0.547992461293902,0,0,0,1.28019066769952,0,0,0,0.954053754535364,5.69212969109448,6.45960908308033,5.3518251937532,0,1.12101712596307,0.526768169550154,2.9506465517075,3.14408610199332,1.43921049299656,0,2.60737813306872,3.78758244587787,0,0.334231370655521,1.76763544484902,0.664601683750863,1.08321545506006,0.128091319725675,0.260118695119756,0.493313713811028,0.276350017785848,0.289803085735052,1.92772532110679,1.60524496853828,2.09071047609954,0,1.91610246800961,4.12352934579156,0.759059076058509,0,0,0,0.301150238155546,0.255973222308837,0,0,0,3.22570789159572,2.13952156626806,2.31719046212478,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0,0.087834785693126,0.72038491523742,0,0.370784442784429,0,0.348259474598534,0,0.953962497221368,0.571994910780128,1.11437250398869,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,1.31780417436063,0,0,1.98788780678127,0,0,0.286836620748814,0.354668382198357,0,2.1349799145941,1.48000529050296,0,0.269421344139376,0,0.605429710579726,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.757301322732344,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0.116193942869518,0.518305275076852,0,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0.217879444092406,0,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0.268675568108545,0,0,0,0,0,0.576479813667846,0.50496973370552,0.126995788584338,0,0,1.71072446022705,0,0.600686115687835,0.285826432630578,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0.112085143993527,1.57624608161542,1.2937654491571,1.54011643535698,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,1.65766205374414,0.12269149171914,0.500170521059677,0.813795071099207,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,2.0694614258501,0.664225598535437,0.553107505625109,0.0868836144680828,0.783204629850962,0.686286847621712,1.03384013061444,0.215714200818617,1.81436848265855,1.81876542867756,0,0.604780586659361,0.248107807818777,0.61384789315225,0.841980283299221,0.512556597022804,0,0.321707842287215,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0,0.184161977871793,0.34444334449382,0.546273504020151,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0.445160178233687,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,3.16950440270266,0.682499557039929,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0.196498082026242,0.35667105148125,0.709522128141196,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,1.01489521846434,0,0,0,0.41136227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|short_description=p4@STK19 | |||
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Latest revision as of 01:20, 18 September 2015
Short description: | p4@STK19 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STK19_5end |
Coexpression cluster: | NA |
Association with transcript: | 167bp_to_ENST00000492583_5end |
EntrezGene: | STK19 |
HGNC: | 11398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hematopoietic system | 7.02e-10 | 98 |
blood island | 7.02e-10 | 98 |
bone marrow | 2.06e-09 | 76 |
connective tissue | 1.22e-08 | 371 |
hemolymphoid system | 1.88e-08 | 108 |
bone element | 2.16e-08 | 82 |
immune system | 8.60e-08 | 93 |
skeletal element | 2.97e-07 | 90 |