FFCP PHASE1:Hg19::chr6:83775489..83775566,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:83775489..83775566,-
|short_description=p1@UBE2CBP
|description=CAGE_peak_1_at_UBE2CBP_5end
|association_with_transcript=0bp_to_ENST00000237186,ENST0000036...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90025 | |EntrezGene=90025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21381 | |HGNC=21381 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z6J8,D6RHY9,Q4G0X5 | |UniProt=Q7Z6J8,D6RHY9,Q4G0X5 | ||
|association_with_transcript=0bp_to_ENST00000237186,ENST00000369747,ENST00000430071,ENST00000505226,NM_198920,uc003pjp.2,uc003pjr.2,uc011dyx.1_5end | |||
|cluster_id=chr6:83775489..83775566,- | |||
|description=CAGE_peak_1_at_UBE2CBP_5end | |||
|id=chr6:83775489..83775566,- | |||
|ontology_enrichment_celltype=CL:0000542!5.06e-10!53;CL:0000051!5.06e-10!53;CL:0000838!1.29e-09!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.05e-10,53;CL:0000051,5.05e-10,53;CL:0000838,1.29e-09,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.28e-12!51;DOID:0060083!1.28e-12!51;DOID:162!3.54e-12!235;DOID:14566!1.91e-11!239;DOID:1240!3.35e-11!39;DOID:0050686!1.04e-10!137;DOID:8692!4.72e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.68e-10;39!DOID:8692;4.96e-09;31!DOID:2531;1.38e-08;51!DOID:0060083;1.38e-08;51!DOID:3095;9.92e-07;22!DOID:2994;9.92e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.28e-12,51;DOID:0060083,1.28e-12,51;DOID:162,3.53e-12,235;DOID:14566,1.98e-11,239;DOID:1240,3.34e-11,39;DOID:0050686,1.04e-10,137;DOID:8692,4.71e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.02e-13!94;UBERON:0001016!2.02e-13!94;UBERON:0001017!1.03e-12!82;UBERON:0000955!1.99e-12!69;UBERON:0006238!1.99e-12!69;UBERON:0005743!3.57e-12!86;UBERON:0001049!4.73e-11!57;UBERON:0005068!4.73e-11!57;UBERON:0006241!4.73e-11!57;UBERON:0007135!4.73e-11!57;UBERON:0002616!5.65e-11!59;UBERON:0003080!1.98e-10!42;UBERON:0001893!2.81e-10!34;UBERON:0002780!4.54e-10!41;UBERON:0001890!4.54e-10!41;UBERON:0006240!4.54e-10!41;UBERON:0001869!4.76e-10!32;UBERON:0002791!6.49e-10!33;UBERON:0002020!1.12e-09!34;UBERON:0003528!1.12e-09!34;UBERON:0002346!1.85e-09!90;UBERON:0002619!7.31e-09!22;UBERON:0001950!1.24e-08!20;UBERON:0000153!3.34e-08!129;UBERON:0007811!3.34e-08!129;UBERON:0000924!3.81e-08!173;UBERON:0006601!3.81e-08!173;UBERON:0000956!4.04e-08!25;UBERON:0000203!4.04e-08!25;UBERON:0003075!5.16e-08!86;UBERON:0007284!5.16e-08!86;UBERON:0000033!9.53e-08!123;UBERON:0003056!9.64e-08!61;UBERON:0004121!4.80e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.77e-09;32!UBERON:0002791;4.48e-09;32!UBERON:0001893;6.69e-09;34!UBERON:0002619;7.13e-09;22!UBERON:0001950;1.31e-08;20!UBERON:0003528;1.38e-08;34!UBERON:0002020;1.38e-08;34!UBERON:0000956;4.66e-08;25!UBERON:0000203;4.66e-08;25!UBERON:0002780;7.68e-08;41!UBERON:0001890;7.68e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-13,89;UBERON:0001017,2.23e-12,81;UBERON:0000955,4.41e-12,68;UBERON:0006238,4.41e-12,68;UBERON:0000073,9.11e-11,53;UBERON:0002616,9.11e-11,53;UBERON:0001049,1.05e-10,56;UBERON:0005068,1.05e-10,56;UBERON:0006241,1.05e-10,56;UBERON:0007135,1.05e-10,56;UBERON:0001893,2.80e-10,34;UBERON:0002780,4.53e-10,41;UBERON:0001890,4.53e-10,41;UBERON:0003080,4.53e-10,41;UBERON:0006240,4.53e-10,41;UBERON:0001869,4.75e-10,32;UBERON:0002791,6.73e-10,32;UBERON:0003528,1.11e-09,34;UBERON:0002020,1.11e-09,34;UBERON:0002346,4.85e-09,86;UBERON:0002619,7.30e-09,22;UBERON:0001950,1.23e-08,20;UBERON:0000956,4.03e-08,25;UBERON:0000203,4.03e-08,25;UBERON:0004121,1.03e-07,171;UBERON:0000924,1.03e-07,171;UBERON:0006601,1.03e-07,171;UBERON:0003075,1.32e-07,82;UBERON:0007284,1.32e-07,82;UBERON:0003056,1.42e-07,61 | |||
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| ||
|short_description=p1@UBE2CBP | |||
}} | }} |
Latest revision as of 00:00, 20 September 2015
Short description: | p1@UBE2CBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE2CBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000237186, ENST00000369747, ENST00000430071, ENST00000505226, NM_198920, uc003pjp.2, uc003pjr.2, uc011dyx.1_5end |
EntrezGene: | UBE2CBP |
HGNC: | 21381 |
UniProt: | Q7Z6J8D6RHY9Q4G0X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.05e-10 | 53 |
common lymphoid progenitor | 5.05e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.29e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.27e-13 | 89 |
central nervous system | 2.23e-12 | 81 |
brain | 4.41e-12 | 68 |
future brain | 4.41e-12 | 68 |
regional part of nervous system | 9.11e-11 | 53 |
regional part of brain | 9.11e-11 | 53 |
neural tube | 1.05e-10 | 56 |
neural rod | 1.05e-10 | 56 |
future spinal cord | 1.05e-10 | 56 |
neural keel | 1.05e-10 | 56 |
telencephalon | 2.80e-10 | 34 |
regional part of forebrain | 4.53e-10 | 41 |
forebrain | 4.53e-10 | 41 |
anterior neural tube | 4.53e-10 | 41 |
future forebrain | 4.53e-10 | 41 |
cerebral hemisphere | 4.75e-10 | 32 |
regional part of telencephalon | 6.73e-10 | 32 |
brain grey matter | 1.11e-09 | 34 |
gray matter | 1.11e-09 | 34 |
neurectoderm | 4.85e-09 | 86 |
regional part of cerebral cortex | 7.30e-09 | 22 |
neocortex | 1.23e-08 | 20 |
cerebral cortex | 4.03e-08 | 25 |
pallium | 4.03e-08 | 25 |
ectoderm-derived structure | 1.03e-07 | 171 |
ectoderm | 1.03e-07 | 171 |
presumptive ectoderm | 1.03e-07 | 171 |
neural plate | 1.32e-07 | 82 |
presumptive neural plate | 1.32e-07 | 82 |
pre-chordal neural plate | 1.42e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.28e-12 | 51 |
immune system cancer | 1.28e-12 | 51 |
cancer | 3.53e-12 | 235 |
disease of cellular proliferation | 1.98e-11 | 239 |
leukemia | 3.34e-11 | 39 |
organ system cancer | 1.04e-10 | 137 |
myeloid leukemia | 4.71e-09 | 31 |