FFCP PHASE1:Hg19::chr7:28220354..28220441,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:28220354..28220441,-
|short_description=p1@JAZF1
|description=CAGE_peak_1_at_JAZF1_5end
|association_with_transcript=0bp_to_ENST00000283928,NM_175061,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221895 | |EntrezGene=221895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28917 | |HGNC=28917 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VZ6 | |UniProt=Q86VZ6 | ||
|association_with_transcript=0bp_to_ENST00000283928,NM_175061,uc003szn.2_5end | |||
|cluster_id=chr7:28220354..28220441,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_JAZF1_5end | |||
|id=chr7:28220354..28220441,- | |||
|ontology_enrichment_celltype=CL:0000738!7.04e-17!140;CL:0002057!6.34e-16!42;CL:0000766!1.31e-15!76;CL:0000860!4.92e-14!45;CL:0002031!1.82e-13!124;CL:0000839!4.39e-13!70;CL:0002087!1.43e-12!119;CL:0000557!4.92e-12!71;CL:0002009!7.59e-11!65;CL:0002194!9.23e-11!63;CL:0000576!9.23e-11!63;CL:0000040!9.23e-11!63;CL:0000559!9.23e-11!63;CL:0000037!1.44e-07!172;CL:0000566!1.44e-07!172;CL:0002032!3.38e-07!165;CL:0000837!3.38e-07!165;CL:0000134!9.05e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-11;33!CL:0002057;1.41e-11;33!CL:0000473;4.17e-09;39!CL:0000234;4.17e-09;39!CL:0000576;5.31e-09;48!CL:0000766;1.21e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.37e-17,136;CL:0000766,1.45e-16,72;CL:0000860,6.28e-16,42;CL:0002057,6.28e-16,42;CL:0000473,1.24e-14,48;CL:0000234,1.24e-14,48;CL:0002031,4.21e-14,120;CL:0000839,5.88e-14,66;CL:0002087,3.44e-13,115;CL:0000557,7.90e-13,67;CL:0002009,1.26e-11,61;CL:0002194,1.47e-11,59;CL:0000576,1.47e-11,59;CL:0000040,1.47e-11,59;CL:0000559,1.47e-11,59;CL:0000037,7.60e-08,168;CL:0002032,1.84e-07,161;CL:0000837,1.84e-07,161;CL:0000134,3.43e-07,354;CL:0002320,6.66e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-39!115;UBERON:0001049!1.37e-16!57;UBERON:0005068!1.37e-16!57;UBERON:0006241!1.37e-16!57;UBERON:0007135!1.37e-16!57;UBERON:0002616!1.69e-15!59;UBERON:0002390!7.34e-15!102;UBERON:0003061!7.34e-15!102;UBERON:0000955!4.50e-14!69;UBERON:0006238!4.50e-14!69;UBERON:0003080!6.27e-14!42;UBERON:0002193!1.07e-13!112;UBERON:0002780!2.21e-13!41;UBERON:0001890!2.21e-13!41;UBERON:0006240!2.21e-13!41;UBERON:0001017!6.06e-12!82;UBERON:0002619!2.93e-11!22;UBERON:0002020!3.48e-11!34;UBERON:0003528!3.48e-11!34;UBERON:0001893!3.69e-11!34;UBERON:0002371!6.91e-11!80;UBERON:0002791!9.86e-11!33;UBERON:0001869!1.16e-10!32;UBERON:0005743!1.24e-10!86;UBERON:0001950!2.04e-10!20;UBERON:0000073!9.42e-10!94;UBERON:0001016!9.42e-10!94;UBERON:0001474!2.06e-09!86;UBERON:0004765!2.60e-09!101;UBERON:0001434!2.60e-09!101;UBERON:0003075!1.13e-08!86;UBERON:0007284!1.13e-08!86;UBERON:0000956!1.40e-08!25;UBERON:0000203!1.40e-08!25;UBERON:0002405!1.79e-07!115;UBERON:0002346!4.10e-07!90;UBERON:0000479!9.91e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.88e-11;22!UBERON:0007023;1.79e-10;114!UBERON:0001950;2.00e-10;20!UBERON:0002780;6.26e-10;41!UBERON:0001890;6.26e-10;41!UBERON:0001893;1.57e-09;34!UBERON:0001869;1.88e-09;32!UBERON:0003528;1.94e-09;34!UBERON:0002020;1.94e-09;34!UBERON:0002791;2.58e-09;32!UBERON:0000073;2.76e-09;53!UBERON:0002616;2.76e-09;53!UBERON:0000956;1.49e-08;25!UBERON:0000203;1.49e-08;25!UBERON:0001017;8.11e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.82e-39,114;UBERON:0001049,4.72e-16,56;UBERON:0005068,4.72e-16,56;UBERON:0006241,4.72e-16,56;UBERON:0007135,4.72e-16,56;UBERON:0002390,1.61e-15,98;UBERON:0003061,1.61e-15,98;UBERON:0000073,4.57e-15,53;UBERON:0002616,4.57e-15,53;UBERON:0002193,2.97e-14,108;UBERON:0000955,1.38e-13,68;UBERON:0006238,1.38e-13,68;UBERON:0002780,2.19e-13,41;UBERON:0001890,2.19e-13,41;UBERON:0003080,2.19e-13,41;UBERON:0006240,2.19e-13,41;UBERON:0002371,1.57e-11,76;UBERON:0001017,1.65e-11,81;UBERON:0002619,2.91e-11,22;UBERON:0003528,3.46e-11,34;UBERON:0002020,3.46e-11,34;UBERON:0001893,3.67e-11,34;UBERON:0001869,1.15e-10,32;UBERON:0002405,1.27e-10,93;UBERON:0001016,1.69e-10,89;UBERON:0002791,1.84e-10,32;UBERON:0001950,2.03e-10,20;UBERON:0001474,5.94e-10,82;UBERON:0000479,8.08e-10,773;UBERON:0001434,2.81e-09,100;UBERON:0003075,9.72e-09,82;UBERON:0007284,9.72e-09,82;UBERON:0000956,1.39e-08,25;UBERON:0000203,1.39e-08,25;UBERON:0004765,2.93e-08,90;UBERON:0002384,3.90e-07,371;UBERON:0002346,4.00e-07,86 | |||
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| ||
|short_description=p1@JAZF1 | |||
}} | }} |
Latest revision as of 03:03, 18 September 2015
Short description: | p1@JAZF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JAZF1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000283928, NM_175061, uc003szn.2_5end |
EntrezGene: | JAZF1 |
HGNC: | 28917 |
UniProt: | Q86VZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.37e-17 | 136 |
myeloid leukocyte | 1.45e-16 | 72 |
classical monocyte | 6.28e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.28e-16 | 42 |
defensive cell | 1.24e-14 | 48 |
phagocyte | 1.24e-14 | 48 |
hematopoietic lineage restricted progenitor cell | 4.21e-14 | 120 |
myeloid lineage restricted progenitor cell | 5.88e-14 | 66 |
nongranular leukocyte | 3.44e-13 | 115 |
granulocyte monocyte progenitor cell | 7.90e-13 | 67 |
macrophage dendritic cell progenitor | 1.26e-11 | 61 |
monopoietic cell | 1.47e-11 | 59 |
monocyte | 1.47e-11 | 59 |
monoblast | 1.47e-11 | 59 |
promonocyte | 1.47e-11 | 59 |
hematopoietic stem cell | 7.60e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.84e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-07 | 161 |
mesenchymal cell | 3.43e-07 | 354 |
connective tissue cell | 6.66e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.82e-39 | 114 |
neural tube | 4.72e-16 | 56 |
neural rod | 4.72e-16 | 56 |
future spinal cord | 4.72e-16 | 56 |
neural keel | 4.72e-16 | 56 |
hematopoietic system | 1.61e-15 | 98 |
blood island | 1.61e-15 | 98 |
regional part of nervous system | 4.57e-15 | 53 |
regional part of brain | 4.57e-15 | 53 |
hemolymphoid system | 2.97e-14 | 108 |
brain | 1.38e-13 | 68 |
future brain | 1.38e-13 | 68 |
regional part of forebrain | 2.19e-13 | 41 |
forebrain | 2.19e-13 | 41 |
anterior neural tube | 2.19e-13 | 41 |
future forebrain | 2.19e-13 | 41 |
bone marrow | 1.57e-11 | 76 |
central nervous system | 1.65e-11 | 81 |
regional part of cerebral cortex | 2.91e-11 | 22 |
brain grey matter | 3.46e-11 | 34 |
gray matter | 3.46e-11 | 34 |
telencephalon | 3.67e-11 | 34 |
cerebral hemisphere | 1.15e-10 | 32 |
immune system | 1.27e-10 | 93 |
nervous system | 1.69e-10 | 89 |
regional part of telencephalon | 1.84e-10 | 32 |
neocortex | 2.03e-10 | 20 |
bone element | 5.94e-10 | 82 |
tissue | 8.08e-10 | 773 |
skeletal system | 2.81e-09 | 100 |
neural plate | 9.72e-09 | 82 |
presumptive neural plate | 9.72e-09 | 82 |
cerebral cortex | 1.39e-08 | 25 |
pallium | 1.39e-08 | 25 |
skeletal element | 2.93e-08 | 90 |
connective tissue | 3.90e-07 | 371 |
neurectoderm | 4.00e-07 | 86 |