FFCP PHASE1:Hg19::chr7:6388537..6388611,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:6388537..6388611,-
|short_description=p1@C7orf70
|description=CAGE_peak_1_at_C7orf70_5end
|association_with_transcript=0bp_to_ENST00000313324,ENST000005301...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84792 | |EntrezGene=84792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22422 | |HGNC=22422 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4H9,E9PQC6 | |UniProt=Q7Z4H9,E9PQC6 | ||
|association_with_transcript=0bp_to_ENST00000313324,ENST00000530143,ENST00000533877,NM_001037163,uc003spu.2_5end | |||
|cluster_id=chr7:6388537..6388611,- | |||
|description=CAGE_peak_1_at_C7orf70_5end | |||
|id=chr7:6388537..6388611,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.24e-15!94;UBERON:0001016!1.24e-15!94;UBERON:0001017!5.35e-14!82;UBERON:0005743!6.77e-14!86;UBERON:0000924!1.34e-13!173;UBERON:0006601!1.34e-13!173;UBERON:0004121!3.13e-13!169;UBERON:0000955!3.66e-11!69;UBERON:0006238!3.66e-11!69;UBERON:0001049!3.04e-10!57;UBERON:0005068!3.04e-10!57;UBERON:0006241!3.04e-10!57;UBERON:0007135!3.04e-10!57;UBERON:0001869!6.11e-10!32;UBERON:0002616!7.23e-10!59;UBERON:0000956!7.83e-10!25;UBERON:0000203!7.83e-10!25;UBERON:0000153!8.77e-10!129;UBERON:0007811!8.77e-10!129;UBERON:0001893!1.44e-09!34;UBERON:0000033!1.54e-09!123;UBERON:0003080!2.21e-09!42;UBERON:0002780!2.49e-09!41;UBERON:0001890!2.49e-09!41;UBERON:0006240!2.49e-09!41;UBERON:0002619!2.67e-09!22;UBERON:0002791!4.04e-09!33;UBERON:0002346!5.56e-09!90;UBERON:0001950!1.07e-08!20;UBERON:0000475!1.12e-08!365;UBERON:0003075!1.13e-08!86;UBERON:0007284!1.13e-08!86;UBERON:0002020!1.30e-08!34;UBERON:0003528!1.30e-08!34;UBERON:0003056!5.74e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;7.71e-10;25!UBERON:0000203;7.71e-10;25!UBERON:0002619;2.67e-09;22!UBERON:0001869;3.33e-09;32!UBERON:0001950;1.02e-08;20!UBERON:0001893;1.51e-08;34!UBERON:0002791;1.99e-08;32!UBERON:0003528;6.92e-08;34!UBERON:0002020;6.92e-08;34!UBERON:0002780;7.20e-07;41!UBERON:0001890;7.20e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.17e-15,89;UBERON:0001017,6.36e-14,81;UBERON:0004121,1.31e-13,171;UBERON:0000924,1.31e-13,171;UBERON:0006601,1.31e-13,171;UBERON:0000955,4.33e-11,68;UBERON:0006238,4.33e-11,68;UBERON:0001049,3.54e-10,56;UBERON:0005068,3.54e-10,56;UBERON:0006241,3.54e-10,56;UBERON:0007135,3.54e-10,56;UBERON:0001869,6.11e-10,32;UBERON:0000956,7.83e-10,25;UBERON:0000203,7.83e-10,25;UBERON:0000073,9.18e-10,53;UBERON:0002616,9.18e-10,53;UBERON:0001893,1.44e-09,34;UBERON:0002780,2.49e-09,41;UBERON:0001890,2.49e-09,41;UBERON:0003080,2.49e-09,41;UBERON:0006240,2.49e-09,41;UBERON:0002619,2.67e-09,22;UBERON:0002791,3.97e-09,32;UBERON:0002346,5.69e-09,86;UBERON:0001950,1.07e-08,20;UBERON:0003075,1.15e-08,82;UBERON:0007284,1.15e-08,82;UBERON:0003528,1.30e-08,34;UBERON:0002020,1.30e-08,34;UBERON:0003056,4.44e-08,61;UBERON:0011216,8.39e-08,223;UBERON:0010314,1.04e-07,132;UBERON:0010371,3.13e-07,104 | |||
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| ||
|short_description=p1@C7orf70 | |||
}} | }} |
Latest revision as of 04:20, 19 September 2015
Short description: | p1@C7orf70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C7orf70_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313324, ENST00000530143, ENST00000533877, NM_001037163, uc003spu.2_5end |
EntrezGene: | C7orf70 |
HGNC: | 22422 |
UniProt: | Q7Z4H9E9PQC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.17e-15 | 89 |
central nervous system | 6.36e-14 | 81 |
ectoderm-derived structure | 1.31e-13 | 171 |
ectoderm | 1.31e-13 | 171 |
presumptive ectoderm | 1.31e-13 | 171 |
brain | 4.33e-11 | 68 |
future brain | 4.33e-11 | 68 |
neural tube | 3.54e-10 | 56 |
neural rod | 3.54e-10 | 56 |
future spinal cord | 3.54e-10 | 56 |
neural keel | 3.54e-10 | 56 |
cerebral hemisphere | 6.11e-10 | 32 |
cerebral cortex | 7.83e-10 | 25 |
pallium | 7.83e-10 | 25 |
regional part of nervous system | 9.18e-10 | 53 |
regional part of brain | 9.18e-10 | 53 |
telencephalon | 1.44e-09 | 34 |
regional part of forebrain | 2.49e-09 | 41 |
forebrain | 2.49e-09 | 41 |
anterior neural tube | 2.49e-09 | 41 |
future forebrain | 2.49e-09 | 41 |
regional part of cerebral cortex | 2.67e-09 | 22 |
regional part of telencephalon | 3.97e-09 | 32 |
neurectoderm | 5.69e-09 | 86 |
neocortex | 1.07e-08 | 20 |
neural plate | 1.15e-08 | 82 |
presumptive neural plate | 1.15e-08 | 82 |
brain grey matter | 1.30e-08 | 34 |
gray matter | 1.30e-08 | 34 |
pre-chordal neural plate | 4.44e-08 | 61 |
organ system subdivision | 8.39e-08 | 223 |
structure with developmental contribution from neural crest | 1.04e-07 | 132 |
ecto-epithelium | 3.13e-07 | 104 |