FFCP PHASE1:Hg19::chr11:123448159..123448170,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AB384137_5end | |||
|cluster_id=chr11:123448159..123448170,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_4_at_AB384137_5end | |||
|id=chr11:123448159..123448170,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!1.80e-39!6;UBERON:0001049!3.75e-38!57;UBERON:0005068!3.75e-38!57;UBERON:0006241!3.75e-38!57;UBERON:0007135!3.75e-38!57;UBERON:0002616!9.32e-37!59;UBERON:0001950!1.63e-36!20;UBERON:0000955!4.76e-34!69;UBERON:0006238!4.76e-34!69;UBERON:0002619!3.58e-33!22;UBERON:0001869!1.43e-31!32;UBERON:0001017!2.56e-31!82;UBERON:0005743!1.04e-29!86;UBERON:0001893!1.26e-29!34;UBERON:0000956!4.01e-29!25;UBERON:0000203!4.01e-29!25;UBERON:0003075!4.78e-27!86;UBERON:0007284!4.78e-27!86;UBERON:0000073!1.42e-26!94;UBERON:0001016!1.42e-26!94;UBERON:0007023!1.46e-26!115;UBERON:0002791!5.25e-26!33;UBERON:0002346!1.10e-25!90;UBERON:0002020!3.36e-25!34;UBERON:0003528!3.36e-25!34;UBERON:0002780!2.79e-24!41;UBERON:0001890!2.79e-24!41;UBERON:0006240!2.79e-24!41;UBERON:0003080!1.17e-23!42;UBERON:0002771!1.83e-20!3;UBERON:0004733!2.35e-20!12;UBERON:0002028!2.35e-20!12;UBERON:0007277!2.35e-20!12;UBERON:0000033!1.15e-19!123;UBERON:0004732!9.45e-19!13;UBERON:0000153!1.41e-18!129;UBERON:0007811!1.41e-18!129;UBERON:0003076!3.50e-16!15;UBERON:0003057!3.50e-16!15;UBERON:0003056!1.19e-15!61;UBERON:0001870!2.53e-14!2;UBERON:0001871!2.47e-13!7;UBERON:0004121!3.47e-13!169;UBERON:0002021!5.34e-13!5;UBERON:0002680!7.88e-13!9;UBERON:0001895!7.88e-13!9;UBERON:0010092!7.88e-13!9;UBERON:0000924!8.59e-13!173;UBERON:0006601!8.59e-13!173;UBERON:0002037!2.97e-11!6;UBERON:0006215!2.97e-11!6;UBERON:0000064!1.51e-10!219;UBERON:0000025!7.35e-10!194;UBERON:0001896!7.51e-10!3;UBERON:0005290!7.51e-10!3;UBERON:0010096!7.51e-10!3;UBERON:0000477!6.10e-09!286;UBERON:0002702!2.35e-08!1;UBERON:0002902!2.52e-08!1;UBERON:0009899!2.52e-08!1;UBERON:0002022!2.90e-08!1;UBERON:0002298!3.40e-08!8;UBERON:0004111!3.96e-08!241;UBERON:0002581!4.71e-08!1;UBERON:0003112!6.19e-08!1;UBERON:0000032!6.19e-08!1;UBERON:0005253!6.19e-08!1;UBERON:0003128!6.19e-08!1;UBERON:0002241!6.19e-08!1;UBERON:0001703!6.19e-08!1;UBERON:0004761!6.19e-08!1;UBERON:0009617!6.19e-08!1;UBERON:0001874!6.63e-08!1;UBERON:0007190!7.59e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;1.37e-87;9!UBERON:0001895;1.37e-87;9!UBERON:0002037;2.58e-74;6!UBERON:0004733;5.11e-66;12!UBERON:0002028;5.11e-66;12!UBERON:0004732;4.89e-61;13!UBERON:0000988;1.12e-17;3!UBERON:0000073;5.11e-11;53!UBERON:0002616;5.11e-11;53!UBERON:0002298;1.57e-09;6!UBERON:0001016;1.26e-08;83!UBERON:0000955;5.86e-08;68!UBERON:0001017;8.49e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.37e-87,9;UBERON:0001895,1.37e-87,9;UBERON:0010092,1.37e-87,9;UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0004733,5.11e-66,12;UBERON:0002028,5.11e-66,12;UBERON:0007277,5.11e-66,12;UBERON:0004732,4.89e-61,13;UBERON:0003076,4.60e-53,15;UBERON:0003057,4.60e-53,15;UBERON:0000988,1.12e-17,3;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0002298,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0007023,8.86e-08,114;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p4@AB384137 | |||
}} |
Latest revision as of 19:26, 23 July 2015
Short description: | p4@AB384137 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AB384137_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_AB384137_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 1.37e-87 | 9 |
metencephalon | 1.37e-87 | 9 |
future metencephalon | 1.37e-87 | 9 |
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
segmental subdivision of hindbrain | 5.11e-66 | 12 |
hindbrain | 5.11e-66 | 12 |
presumptive hindbrain | 5.11e-66 | 12 |
segmental subdivision of nervous system | 4.89e-61 | 13 |
posterior neural tube | 4.60e-53 | 15 |
chordal neural plate | 4.60e-53 | 15 |
pons | 1.12e-17 | 3 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
brainstem | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
adult organism | 8.86e-08 | 114 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |