FFCP PHASE1:Hg19::chr12:105882068..105882076,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:105882068..105882076,+ | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_at_chr12:105882068..105882076,+ | |||
|id=chr12:105882068..105882076,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.50e-83!24;CL:0000115!1.58e-71!35;CL:0002078!2.77e-56!44;CL:0005020!8.21e-49!6;CL:0002138!8.21e-49!6;CL:0005022!8.21e-49!6;CL:0000071!6.41e-43!18;CL:0002546!6.41e-43!18;CL:0000213!9.42e-43!57;CL:0000215!9.42e-43!57;CL:0002144!6.32e-25!3;CL:0002543!1.23e-21!6;CL:0000222!7.78e-19!119;CL:0002618!9.32e-12!3;CL:0000076!2.33e-11!62;CL:1000413!1.38e-08!9;CL:0000066!3.89e-08!254;CL:0000220!2.45e-07!246;CL:0002321!2.98e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.07e-53;6!CL:0002139;2.13e-52;24!CL:0000115;3.57e-42;36!CL:0002078;2.64e-32;45!CL:0002144;4.65e-27;3!CL:0000213;3.18e-22;58!CL:0000215;3.18e-22;58!CL:0000071;5.80e-18;18!CL:0002188;1.31e-16;5!CL:1000746;3.74e-12;7!CL:1000612;3.74e-12;7!CL:0002545;2.73e-11;2!CL:0002618;5.18e-08;3!CL:0002681;1.79e-07;12!CL:0002584;1.79e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.79e-54,36;CL:0005020,2.07e-53,6;CL:0002138,2.07e-53,6;CL:0005022,2.07e-53,6;CL:0002139,2.28e-52,24;CL:0002078,2.12e-43,45;CL:0000213,1.25e-33,58;CL:0000215,1.25e-33,58;CL:0002144,5.31e-27,3;CL:0000071,6.06e-18,18;CL:0002546,6.06e-18,18;CL:0002188,1.21e-16,5;CL:0000222,5.91e-16,121;CL:1000746,3.53e-12,7;CL:1000612,3.53e-12,7;CL:0002545,2.73e-11,2;CL:0002618,5.18e-08,3;CL:0002681,1.73e-07,12;CL:0002584,1.73e-07,12;CL:0002321,2.18e-07,250;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0005022;2.07e-53;6!CL:0002546;5.80e-18;18!CL:0000222;5.40e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.41e-43!18;UBERON:0004638!6.41e-43!18;UBERON:0004852!6.41e-43!18;UBERON:0001473!1.56e-36!8;UBERON:0004536!1.56e-36!8;UBERON:0006558!1.56e-36!8;UBERON:0000487!7.56e-35!22;UBERON:0000055!9.83e-35!69;UBERON:0006914!1.74e-30!25;UBERON:0002049!6.09e-30!79;UBERON:0007798!6.09e-30!79;UBERON:0002465!3.71e-29!10;UBERON:0001915!6.32e-25!3;UBERON:0001982!6.32e-25!3;UBERON:0004535!1.31e-20!110;UBERON:0001009!5.60e-20!113;UBERON:0001981!3.65e-17!60;UBERON:0007500!3.65e-17!60;UBERON:0004537!3.65e-17!60;UBERON:0006965!3.65e-17!60;UBERON:0001638!1.65e-14!9;UBERON:0003920!1.65e-14!9;UBERON:0004582!1.65e-14!9;UBERON:0004872!1.14e-11!84;UBERON:0003914!7.73e-11!118;UBERON:0004111!6.78e-10!241;UBERON:0002134!2.35e-09!1;UBERON:0005208!2.35e-09!1;UBERON:0005946!2.35e-09!1;UBERON:0005965!2.35e-09!1;UBERON:0002078!2.35e-09!1;UBERON:0002363!4.50e-09!1;UBERON:0007647!4.50e-09!1;UBERON:0010115!4.50e-09!1;UBERON:0000477!8.38e-09!286;UBERON:0003915!1.38e-08!9;UBERON:0004700!1.38e-08!9;UBERON:0001917!1.38e-08!9;UBERON:0002066!2.14e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.18e-40;8!UBERON:0004536;3.18e-40;8!UBERON:0006558;3.18e-40;8!UBERON:0002465;2.67e-32;10!UBERON:0010523;4.65e-27;3!UBERON:0001915;4.65e-27;3!UBERON:0001982;4.65e-27;3!UBERON:0004638;5.80e-18;18!UBERON:0001986;5.80e-18;18!UBERON:0004852;5.80e-18;18!UBERON:0000487;8.89e-15;22!UBERON:0006914;4.71e-13;25!UBERON:0000055;1.14e-12;65!UBERON:0002405;2.96e-12;27!UBERON:0000074;3.74e-12;7!UBERON:0001229;3.74e-12;7!UBERON:0005800;2.73e-11;2!UBERON:0001515;2.73e-11;2!UBERON:0002049;1.24e-09;75!UBERON:0007798;1.24e-09;75!UBERON:0000490;9.41e-09;33!UBERON:0001225;1.79e-07;12!UBERON:0008987;1.79e-07;12!UBERON:0002193;3.36e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.18e-40,8;UBERON:0004536,3.18e-40,8;UBERON:0006558,3.18e-40,8;UBERON:0002465,2.67e-32,10;UBERON:0010523,5.31e-27,3;UBERON:0001915,5.31e-27,3;UBERON:0001982,5.31e-27,3;UBERON:0000055,2.22e-18,68;UBERON:0004638,6.06e-18,18;UBERON:0001986,6.06e-18,18;UBERON:0004852,6.06e-18,18;UBERON:0002049,5.48e-16,78;UBERON:0007798,5.48e-16,78;UBERON:0000487,9.21e-15,22;UBERON:0006914,4.86e-13,25;UBERON:0010532,3.53e-12,7;UBERON:0000074,3.53e-12,7;UBERON:0001229,3.53e-12,7;UBERON:0001230,3.53e-12,7;UBERON:0003220,3.53e-12,7;UBERON:0005749,3.53e-12,7;UBERON:0004199,3.53e-12,7;UBERON:0004209,3.53e-12,7;UBERON:0004198,3.53e-12,7;UBERON:0004535,2.41e-11,109;UBERON:0005800,2.73e-11,2;UBERON:0001515,2.73e-11,2;UBERON:0001009,4.97e-11,112;UBERON:0005103,8.90e-11,8;UBERON:0000083,8.90e-11,8;UBERON:0009201,8.90e-11,8;UBERON:0006553,8.90e-11,8;UBERON:0003074,8.90e-11,8;UBERON:0003060,8.90e-11,8;UBERON:0000080,1.10e-09,9;UBERON:0002120,1.10e-09,9;UBERON:0004875,1.10e-09,9;UBERON:0005721,1.10e-09,9;UBERON:0005754,1.10e-09,9;UBERON:0007297,1.10e-09,9;UBERON:0004876,4.34e-08,11;UBERON:0004111,9.40e-08,240;UBERON:0001225,1.73e-07,12;UBERON:0008987,1.73e-07,12;UBERON:0003887,1.73e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,13.1792547176358,7.82685777910763,10.0416183829401,2.01414658554573,1.52054421143703,0.488124115096339,6.25027236587977,0,9.64437065468061,0,0.337834441449967,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47535988059329,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87103075804167,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:105882068..105882076,+ | |||
}} |
Latest revision as of 04:24, 24 July 2015
Short description: | p@chr12:105882068..105882076, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:105882068..105882076, + |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.79e-54 | 36 |
lymphangioblast | 2.07e-53 | 6 |
endothelial cell of lymphatic vessel | 2.07e-53 | 6 |
vascular lymphangioblast | 2.07e-53 | 6 |
endothelial cell of vascular tree | 2.28e-52 | 24 |
meso-epithelial cell | 2.12e-43 | 45 |
lining cell | 1.25e-33 | 58 |
barrier cell | 1.25e-33 | 58 |
capillary endothelial cell | 5.31e-27 | 3 |
blood vessel endothelial cell | 6.06e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.06e-18 | 18 |
glomerular endothelial cell | 1.21e-16 | 5 |
mesodermal cell | 5.91e-16 | 121 |
glomerular cell | 3.53e-12 | 7 |
kidney corpuscule cell | 3.53e-12 | 7 |
thoracic aorta endothelial cell | 2.73e-11 | 2 |
endothelial cell of umbilical vein | 5.18e-08 | 3 |
kidney cortical cell | 1.73e-07 | 12 |
renal cortical epithelial cell | 1.73e-07 | 12 |
embryonic cell | 2.18e-07 | 250 |
epithelial cell | 2.35e-07 | 253 |