FFCP PHASE1:Hg19::chr12:125353434..125353447,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:125353434..125353447,- | |||
|description=CAGE_peak_at_chr12:125353434..125353447,- | |||
|id=chr12:125353434..125353447,- | |||
|ontology_enrichment_celltype=CL:0000763!6.01e-14!112;CL:0000049!6.01e-14!112;CL:0000037!1.03e-09!172;CL:0000566!1.03e-09!172;CL:0000988!1.30e-08!182;CL:0002032!2.14e-08!165;CL:0000837!2.14e-08!165;CL:0002619!1.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;4.49e-22;3!CL:0000763;1.10e-12;100!CL:0000235;1.83e-11;6!CL:0000784;3.16e-10;3!CL:0002032;7.28e-09;1!CL:0000557;7.28e-09;1!CL:0000037;1.27e-08;1!CL:0001024;1.27e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.14e-30,108;CL:0000049,1.14e-30,108;CL:0000037,3.34e-22,168;CL:0002619,3.49e-22,3;CL:0000988,7.33e-21,177;CL:0002032,2.77e-19,161;CL:0000837,2.77e-19,161;CL:0000235,1.93e-11,6;CL:0000557,9.68e-11,67;CL:0002194,3.73e-10,59;CL:0000576,3.73e-10,59;CL:0000040,3.73e-10,59;CL:0000559,3.73e-10,59;CL:0000784,3.82e-10,3;CL:0002009,8.94e-10,61;CL:0000839,6.35e-09,66;CL:0001024,1.27e-08,1;CL:0000134,3.14e-08,354;CL:0000766,4.67e-08,72;CL:0002320,5.56e-08,361;CL:0000034,2.64e-07,441;CL:0000219,4.16e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;1.96e-13;108!UBERON:0010227;1.27e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!5.31e-24!31;DOID:1240!8.34e-20!39;DOID:2531!1.20e-13!51;DOID:0060083!1.20e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.37e-47;31!DOID:1240;2.28e-31;39!DOID:2531;2.01e-18;51!DOID:0060083;2.01e-18;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.30e-49,31;DOID:1240,2.22e-38,39;DOID:2531,1.09e-28,51;DOID:0060083,1.09e-28,51;DOID:0050686,8.30e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-22!115;UBERON:0002791!1.17e-09!33;UBERON:0001049!1.72e-09!57;UBERON:0005068!1.72e-09!57;UBERON:0006241!1.72e-09!57;UBERON:0007135!1.72e-09!57;UBERON:0001893!2.81e-09!34;UBERON:0002020!3.02e-09!34;UBERON:0003528!3.02e-09!34;UBERON:0002619!1.40e-08!22;UBERON:0002780!2.88e-08!41;UBERON:0001890!2.88e-08!41;UBERON:0006240!2.88e-08!41;UBERON:0001950!4.91e-08!20;UBERON:0003080!5.51e-08!42;UBERON:0002616!6.23e-08!59;UBERON:0001869!2.12e-07!32;UBERON:0000956!2.66e-07!25;UBERON:0000203!2.66e-07!25;UBERON:0005743!3.45e-07!86;UBERON:0001017!5.22e-07!82;UBERON:0000955!9.80e-07!69;UBERON:0006238!9.80e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.27e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.80e-11,76;UBERON:0001474,3.47e-10,82;UBERON:0004765,4.21e-09,90;UBERON:0002405,9.60e-09,93;UBERON:0002079,1.18e-08,1;UBERON:0002390,3.40e-08,98;UBERON:0003061,3.40e-08,98;UBERON:0001434,5.43e-08,100;UBERON:0002384,1.21e-07,371;UBERON:0002193,2.99e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64240395401362,0,0.200544447470142,0,1.79132379391939,2.91504299417082,2.06060454107349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.649094787309367,0.870648686496336,0.26591592103773,1.19245312152671,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,7.29742683847143,1.00451418286425,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.577076851905779,0,0,2.3949524571938,0,2.96343015813436,1.62310970137278,1.40398589056729,11.4117339516596,0,10.0253790836027,1.52362600021443,0,0.605399121573143,0,0,1.22896305723383,2.23676107892416,1.00109485027145,0.586164286206121,0,2.46174797895425,5.13865789104368,0.99921590399346,4.22961015263549,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,1.72678282034527,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0.26721740526556,0.918948995348449,0,0.378893491091197,0,0,0.310298987585686,0,0,0.129177819672012,0.186224142887574,0,0,0,0.217716747896961,0,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:125353434..125353447,- | |||
}} |
Latest revision as of 06:28, 24 July 2015
Short description: | p@chr12:125353434..125353447, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125353434..125353447, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.14e-30 | 108 |
common myeloid progenitor | 1.14e-30 | 108 |
hematopoietic stem cell | 3.34e-22 | 168 |
adult endothelial progenitor cell | 3.49e-22 | 3 |
hematopoietic cell | 7.33e-21 | 177 |
hematopoietic oligopotent progenitor cell | 2.77e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.77e-19 | 161 |
macrophage | 1.93e-11 | 6 |
granulocyte monocyte progenitor cell | 9.68e-11 | 67 |
monopoietic cell | 3.73e-10 | 59 |
monocyte | 3.73e-10 | 59 |
monoblast | 3.73e-10 | 59 |
promonocyte | 3.73e-10 | 59 |
plasmacytoid dendritic cell | 3.82e-10 | 3 |
macrophage dendritic cell progenitor | 8.94e-10 | 61 |
myeloid lineage restricted progenitor cell | 6.35e-09 | 66 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.27e-08 | 1 |
mesenchymal cell | 3.14e-08 | 354 |
myeloid leukocyte | 4.67e-08 | 72 |
connective tissue cell | 5.56e-08 | 361 |
stem cell | 2.64e-07 | 441 |
motile cell | 4.16e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.80e-11 | 76 |
bone element | 3.47e-10 | 82 |
skeletal element | 4.21e-09 | 90 |
immune system | 9.60e-09 | 93 |
left cardiac atrium | 1.18e-08 | 1 |
hematopoietic system | 3.40e-08 | 98 |
blood island | 3.40e-08 | 98 |
skeletal system | 5.43e-08 | 100 |
connective tissue | 1.21e-07 | 371 |
hemolymphoid system | 2.99e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.30e-49 | 31 |
leukemia | 2.22e-38 | 39 |
hematologic cancer | 1.09e-28 | 51 |
immune system cancer | 1.09e-28 | 51 |
organ system cancer | 8.30e-09 | 137 |