FFCP PHASE1:Hg19::chr12:67372998..67373003,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:67372998..67373003,- | |||
|coexpression_cluster_id=C1683 | |||
|description=CAGE_peak_at_chr12:67372998..67373003,- | |||
|id=chr12:67372998..67373003,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.75e-08;2 | |||
|ontology_enrichment_disease=DOID:305!5.31e-10!106;DOID:0050687!1.05e-09!143;DOID:162!6.98e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!8.37e-15!41;UBERON:0001890!8.37e-15!41;UBERON:0006240!8.37e-15!41;UBERON:0001049!1.04e-14!57;UBERON:0005068!1.04e-14!57;UBERON:0006241!1.04e-14!57;UBERON:0007135!1.04e-14!57;UBERON:0002020!2.14e-14!34;UBERON:0003528!2.14e-14!34;UBERON:0003080!3.46e-14!42;UBERON:0001893!4.32e-14!34;UBERON:0007023!6.14e-14!115;UBERON:0001869!1.18e-13!32;UBERON:0002791!1.28e-13!33;UBERON:0003075!1.87e-12!86;UBERON:0007284!1.87e-12!86;UBERON:0002616!6.50e-12!59;UBERON:0001017!6.51e-12!82;UBERON:0002346!6.67e-12!90;UBERON:0004121!1.32e-11!169;UBERON:0000924!2.46e-11!173;UBERON:0006601!2.46e-11!173;UBERON:0000955!5.58e-11!69;UBERON:0006238!5.58e-11!69;UBERON:0005743!1.11e-10!86;UBERON:0003056!1.25e-10!61;UBERON:0000956!1.78e-10!25;UBERON:0000203!1.78e-10!25;UBERON:0000153!3.15e-10!129;UBERON:0007811!3.15e-10!129;UBERON:0000033!7.34e-10!123;UBERON:0000073!1.09e-09!94;UBERON:0001016!1.09e-09!94;UBERON:0002619!3.73e-09!22;UBERON:0001950!5.20e-09!20;UBERON:0000064!3.93e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.91e-13;22!UBERON:0002780;8.83e-12;41!UBERON:0001890;8.83e-12;41!UBERON:0001950;2.32e-11;20!UBERON:0006947;3.63e-11;3!UBERON:0004054;3.63e-11;3!UBERON:0002791;4.60e-11;32!UBERON:0000956;5.04e-11;25!UBERON:0000203;5.04e-11;25!UBERON:0001869;1.34e-10;32!UBERON:0003528;9.24e-10;34!UBERON:0002020;9.24e-10;34!UBERON:0001893;5.17e-09;34!UBERON:0005904;1.81e-08;4!UBERON:0001871;6.85e-08;6!UBERON:0000073;8.34e-07;53!UBERON:0002616;8.34e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.71e-14,41;UBERON:0001890,1.71e-14,41;UBERON:0003080,1.71e-14,41;UBERON:0006240,1.71e-14,41;UBERON:0003056,6.40e-13,61;UBERON:0002619,7.32e-13,22;UBERON:0002791,2.98e-12,32;UBERON:0001869,2.98e-12,32;UBERON:0001950,1.75e-11,20;UBERON:0003528,2.13e-11,34;UBERON:0002020,2.13e-11,34;UBERON:0001893,2.13e-11,34;UBERON:0000956,3.88e-11,25;UBERON:0000203,3.88e-11,25;UBERON:0006947,6.40e-11,3;UBERON:0004054,6.40e-11,3;UBERON:0000073,1.77e-10,53;UBERON:0002616,1.77e-10,53;UBERON:0001049,9.59e-10,56;UBERON:0005068,9.59e-10,56;UBERON:0006241,9.59e-10,56;UBERON:0007135,9.59e-10,56;UBERON:0000955,9.90e-10,68;UBERON:0006238,9.90e-10,68;UBERON:0001017,1.16e-08,81;UBERON:0003075,1.42e-08,82;UBERON:0007284,1.42e-08,82;UBERON:0001016,2.19e-08,89;UBERON:0005904,2.75e-08,4;UBERON:0002346,5.43e-08,86;UBERON:0001871,6.02e-08,6;UBERON:0004121,9.54e-08,171;UBERON:0000924,9.54e-08,171;UBERON:0006601,9.54e-08,171;UBERON:0010371,1.06e-07,104 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,1.10864698731282,0.614843499851882,0.196468613246569,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,1.14721838155602,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.601519410909855,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,3.709476419318,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0.384380134730212,1.65896526242959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0.355709216742071,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.851692475380653,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0.23874448473769,0.296964680832639,0,0,2.11004124615769,1.22439575525196,0,0.844501632511974,0,0.552567831062295,0,0,0,0,0.0898683511473268,1.25314822272926,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,1.04171104434093,0.349839999984783,0,0.341380344856499,0.508507300585533,0,0.344743373241465,1.16641845353302,0.173624994933292,0,5.54743617676877,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0.697118721393016,0.230850775511391,0.227884111694002,0.23056390438806,0.718061155278177,0.217294743844016,0.638002319463839,0.0915975934018623,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,6.31335044559025,1.20990716048664,3.0607276163049,0,0.60129367765797,0.207376382794494,0,0,0.313932918407225,0,2.56148591426813,0,0.173559738335131,0.685946781900644,0.174118413160805,1.04836000945218,0,0,0,0,0.290967049465258,0,0.451961481561065,0.137041924646751,0,0.569797163602908,0.977756913674015,0,0,0.999048047910651,0.144090417154106,0.114536596165916,1.37275998289572,0,0.372757606696298,1.17847017308398,0,0,0,0,0.600420288709789,0.821432273351958,0,1.71906176567983,0,0.837847203816763,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,2.86027152834309,0.160753148465019,0.550157746388935,0.415440338029185,0.899895566206002,0.77380195455795,0.182248669974074,0.335434687599266,0.236417121897595,0.157363764404994,0.739202355635845,0,0,0.714695326373367,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.129282956361551,0.92562821219883,0.342173675768659,0,0,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,0.122026264901963,1.3771002377715,0,0.665574309221114,0.124192805882767,1.66018361923477,0.124980407962107,0,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.310525913752519,0,0.265841714557995,0,0,0,0.813741466409323,0,0.429642228169954,0.464033759878494,0,0,0,0,0,0.57785949122191,8.57766365499703,0,0,0.694567422971502,0.489473409012935,0.179088841081487,0,0.657852148736121,0.530067437837643,0.964570191354574,0,0.256241518587947,0,0,1.93561810612423,0.194860308839388,0.132864840313363,0,0,0.983091635014877,0,0,0,0,0,0,0.139879507719444,0,1.15104934173287,0,0.629063767423586,0,0,0.425149840203366,0,0,0,0.23658523500376,0.80057074828547,0,0,0.385375350578757,0,1.27707087245721,0.615349092722265,6.04972070932123,0.138314504928436,0.807378228159255,0,1.07962490351128,0.11796972334774,0.183428598521679,0,0,0,0,0,0,1.56302802246618,24.3573225867723,0,0.295712172434091,0.337687923091973,0,1.65349437200947,0.253663240775627,3.82882366312754,0.548257766857182,1.48863353516788,0,0.255524855279191,0,3.02655349996942,0,1.36597314810779,1.5966426629275,0,0.514464028312255,0.203909198930495,0.0657727735628491,0.118193840883968,0.333694205676207,0.156986185701028,1.41404030924402,0,2.73947616152849,0,0,0,1.73814972905999,1.859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| |||
|short_description=p@chr12:67372998..67373003,- | |||
}} |
Latest revision as of 11:34, 24 July 2015
Short description: | p@chr12:67372998..67373003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:67372998..67373003, - |
Coexpression cluster: | C1683_pancreatic_somatostatinoma_temporal_mesothelioma_occipital_seminal_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.71e-14 | 41 |
forebrain | 1.71e-14 | 41 |
anterior neural tube | 1.71e-14 | 41 |
future forebrain | 1.71e-14 | 41 |
pre-chordal neural plate | 6.40e-13 | 61 |
regional part of cerebral cortex | 7.32e-13 | 22 |
regional part of telencephalon | 2.98e-12 | 32 |
cerebral hemisphere | 2.98e-12 | 32 |
neocortex | 1.75e-11 | 20 |
brain grey matter | 2.13e-11 | 34 |
gray matter | 2.13e-11 | 34 |
telencephalon | 2.13e-11 | 34 |
cerebral cortex | 3.88e-11 | 25 |
pallium | 3.88e-11 | 25 |
male genital duct | 6.40e-11 | 3 |
internal male genitalia | 6.40e-11 | 3 |
regional part of nervous system | 1.77e-10 | 53 |
regional part of brain | 1.77e-10 | 53 |
neural tube | 9.59e-10 | 56 |
neural rod | 9.59e-10 | 56 |
future spinal cord | 9.59e-10 | 56 |
neural keel | 9.59e-10 | 56 |
brain | 9.90e-10 | 68 |
future brain | 9.90e-10 | 68 |
central nervous system | 1.16e-08 | 81 |
neural plate | 1.42e-08 | 82 |
presumptive neural plate | 1.42e-08 | 82 |
nervous system | 2.19e-08 | 89 |
duct of male reproductive system | 2.75e-08 | 4 |
neurectoderm | 5.43e-08 | 86 |
temporal lobe | 6.02e-08 | 6 |
ectoderm-derived structure | 9.54e-08 | 171 |
ectoderm | 9.54e-08 | 171 |
presumptive ectoderm | 9.54e-08 | 171 |
ecto-epithelium | 1.06e-07 | 104 |