FFCP PHASE1:Hg19::chr13:39611977..39612040,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20291 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JS36 | |||
|association_with_transcript=-3bp_to_ENST00000418503_5end | |||
|cluster_id=chr13:39611977..39612040,- | |||
|description=CAGE_peak_2_at_PROSER1_5end | |||
|id=chr13:39611977..39612040,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.90e-16!173;UBERON:0006601!3.90e-16!173;UBERON:0000073!2.48e-15!94;UBERON:0001016!2.48e-15!94;UBERON:0004121!2.80e-15!169;UBERON:0005743!1.46e-13!86;UBERON:0001017!9.47e-13!82;UBERON:0001049!8.17e-12!57;UBERON:0005068!8.17e-12!57;UBERON:0006241!8.17e-12!57;UBERON:0007135!8.17e-12!57;UBERON:0000153!1.28e-11!129;UBERON:0007811!1.28e-11!129;UBERON:0002346!1.48e-11!90;UBERON:0000955!1.58e-11!69;UBERON:0006238!1.58e-11!69;UBERON:0000033!5.41e-11!123;UBERON:0003075!9.84e-11!86;UBERON:0007284!9.84e-11!86;UBERON:0003056!1.28e-10!61;UBERON:0002780!6.60e-10!41;UBERON:0001890!6.60e-10!41;UBERON:0006240!6.60e-10!41;UBERON:0002616!1.32e-09!59;UBERON:0003080!1.77e-09!42;UBERON:0001893!6.80e-08!34;UBERON:0002020!8.80e-08!34;UBERON:0003528!8.80e-08!34;UBERON:0002791!1.19e-07!33;UBERON:0007023!3.86e-07!115;UBERON:0001869!4.26e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.28e-07;41!UBERON:0001890;1.28e-07;41!UBERON:0000073;3.94e-07;53!UBERON:0002616;3.94e-07;53!UBERON:0001893;9.35e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.71e-17,171;UBERON:0000924,6.71e-17,171;UBERON:0006601,6.71e-17,171;UBERON:0001016,7.59e-15,89;UBERON:0010371,2.68e-14,104;UBERON:0002346,2.02e-13,86;UBERON:0001017,4.35e-13,81;UBERON:0003075,1.47e-12,82;UBERON:0007284,1.47e-12,82;UBERON:0001049,3.15e-12,56;UBERON:0005068,3.15e-12,56;UBERON:0006241,3.15e-12,56;UBERON:0007135,3.15e-12,56;UBERON:0000955,7.02e-12,68;UBERON:0006238,7.02e-12,68;UBERON:0003056,3.13e-11,61;UBERON:0000073,3.14e-11,53;UBERON:0002616,3.14e-11,53;UBERON:0002780,6.57e-10,41;UBERON:0001890,6.57e-10,41;UBERON:0003080,6.57e-10,41;UBERON:0006240,6.57e-10,41;UBERON:0011216,1.61e-09,223;UBERON:0001893,6.77e-08,34;UBERON:0003528,8.77e-08,34;UBERON:0002020,8.77e-08,34;UBERON:0002791,3.21e-07,32;UBERON:0001869,4.25e-07,32;UBERON:0007023,5.56e-07,114 | |||
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| |||
|short_description=p2@PROSER1 | |||
}} |
Latest revision as of 07:34, 17 September 2015
Short description: | p2@PROSER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PROSER1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000418503_5end |
EntrezGene: | PROSER1 |
HGNC: | 20291 |
UniProt: | Q5JS36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.71e-17 | 171 |
ectoderm | 6.71e-17 | 171 |
presumptive ectoderm | 6.71e-17 | 171 |
nervous system | 7.59e-15 | 89 |
ecto-epithelium | 2.68e-14 | 104 |
neurectoderm | 2.02e-13 | 86 |
central nervous system | 4.35e-13 | 81 |
neural plate | 1.47e-12 | 82 |
presumptive neural plate | 1.47e-12 | 82 |
neural tube | 3.15e-12 | 56 |
neural rod | 3.15e-12 | 56 |
future spinal cord | 3.15e-12 | 56 |
neural keel | 3.15e-12 | 56 |
brain | 7.02e-12 | 68 |
future brain | 7.02e-12 | 68 |
pre-chordal neural plate | 3.13e-11 | 61 |
regional part of nervous system | 3.14e-11 | 53 |
regional part of brain | 3.14e-11 | 53 |
regional part of forebrain | 6.57e-10 | 41 |
forebrain | 6.57e-10 | 41 |
anterior neural tube | 6.57e-10 | 41 |
future forebrain | 6.57e-10 | 41 |
organ system subdivision | 1.61e-09 | 223 |
telencephalon | 6.77e-08 | 34 |
brain grey matter | 8.77e-08 | 34 |
gray matter | 8.77e-08 | 34 |
regional part of telencephalon | 3.21e-07 | 32 |
cerebral hemisphere | 4.25e-07 | 32 |
adult organism | 5.56e-07 | 114 |