FFCP PHASE1:Hg19::chr14:30396802..30396859,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5587 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9407 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBA3 | |||
|association_with_transcript=0bp_to_ENST00000415220_5end | |||
|cluster_id=chr14:30396802..30396859,- | |||
|description=CAGE_peak_2_at_PRKD1_5end | |||
|id=chr14:30396802..30396859,- | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-22!180;CL:0000057!2.54e-16!75;CL:0002620!6.96e-09!23;CL:0000136!5.15e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.15e-08;23!CL:0000136;1.04e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-15,76;CL:0000136,7.17e-09,15;CL:0002620,1.10e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.61e-27!365;UBERON:0000477!1.42e-17!286;UBERON:0004111!4.40e-17!241;UBERON:0000483!1.62e-15!309;UBERON:0000119!2.82e-15!312;UBERON:0000481!7.08e-15!347;UBERON:0000025!3.92e-14!194;UBERON:0007023!7.13e-14!115;UBERON:0001017!4.15e-13!82;UBERON:0001049!7.92e-13!57;UBERON:0005068!7.92e-13!57;UBERON:0006241!7.92e-13!57;UBERON:0007135!7.92e-13!57;UBERON:0005743!9.67e-13!86;UBERON:0002616!5.00e-12!59;UBERON:0003075!5.80e-12!86;UBERON:0007284!5.80e-12!86;UBERON:0000468!3.06e-11!659;UBERON:0000073!6.95e-11!94;UBERON:0001016!6.95e-11!94;UBERON:0000955!9.16e-11!69;UBERON:0006238!9.16e-11!69;UBERON:0002346!1.37e-10!90;UBERON:0002100!2.43e-10!216;UBERON:0000033!3.49e-10!123;UBERON:0000153!6.27e-10!129;UBERON:0007811!6.27e-10!129;UBERON:0004121!9.89e-10!169;UBERON:0003080!1.76e-09!42;UBERON:0002780!5.28e-09!41;UBERON:0001890!5.28e-09!41;UBERON:0006240!5.28e-09!41;UBERON:0000924!6.34e-09!173;UBERON:0006601!6.34e-09!173;UBERON:0000467!1.36e-08!625;UBERON:0002020!1.37e-08!34;UBERON:0003528!1.37e-08!34;UBERON:0000480!1.56e-08!626;UBERON:0002791!4.53e-08!33;UBERON:0001893!6.21e-08!34;UBERON:0003056!1.48e-07!61;UBERON:0001869!1.78e-07!32;UBERON:0005256!2.75e-07!143;UBERON:0000914!2.86e-07!83;UBERON:0002329!2.86e-07!83;UBERON:0003077!2.86e-07!83;UBERON:0003059!2.86e-07!83;UBERON:0007282!2.86e-07!83;UBERON:0009618!2.86e-07!83;UBERON:0007285!2.86e-07!83;UBERON:0003102!7.03e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.27e-07;34!UBERON:0002020;1.27e-07;34!UBERON:0002791;1.47e-07;32!UBERON:0000956;2.77e-07;25!UBERON:0000203;2.77e-07;25!UBERON:0002780;3.90e-07;41!UBERON:0001890;3.90e-07;41!UBERON:0001893;5.40e-07;34!UBERON:0000073;6.67e-07;53!UBERON:0002616;6.67e-07;53!UBERON:0001869;8.02e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.86e-13,240;UBERON:0010314,4.94e-13,132;UBERON:0007023,1.98e-12,114;UBERON:0001049,3.56e-12,56;UBERON:0005068,3.56e-12,56;UBERON:0006241,3.56e-12,56;UBERON:0007135,3.56e-12,56;UBERON:0000025,4.15e-11,192;UBERON:0000483,9.20e-11,306;UBERON:0000073,9.99e-11,53;UBERON:0002616,9.99e-11,53;UBERON:0001017,2.99e-10,81;UBERON:0000119,3.28e-10,309;UBERON:0003075,8.98e-10,82;UBERON:0007284,8.98e-10,82;UBERON:0002780,2.83e-09,41;UBERON:0001890,2.83e-09,41;UBERON:0003080,2.83e-09,41;UBERON:0006240,2.83e-09,41;UBERON:0003528,3.43e-09,34;UBERON:0002020,3.43e-09,34;UBERON:0002346,1.92e-08,86;UBERON:0002791,2.13e-08,32;UBERON:0000955,2.82e-08,68;UBERON:0006238,2.82e-08,68;UBERON:0001016,3.10e-08,89;UBERON:0001893,4.66e-08,34;UBERON:0001869,1.51e-07,32;UBERON:0000956,2.05e-07,25;UBERON:0000203,2.05e-07,25;UBERON:0010371,4.51e-07,104;UBERON:0002199,9.26e-07,46;UBERON:0002416,9.26e-07,46 | |||
|phase1_expression=20.5296568575729,14.7729361484778,18.4650269365722,21.0153926541574,9.38618298297304,19.1914475302081,7.59899634504932,1.26343974685366,3.65659879479774,1.47440361900905,0,0,0.263766978228454,1.73272894144065,1.98838425436749,0,2.41077811209591,0.730310090387373,1.95173119516203,0.984968464614303,1.02000345622126,0.940364164434263,2.86235987131057,4.24310717725941,3.89182182743889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,5.36560687762909,5.24236503558474,1.80719576192283,2.50668955317945,2.31754430337318,0.795285947051099,1.94653948121054,1.89069634328136,1.33037638477538,1.49319135678314,4.06035134042909,0,0,0,0,0.132957960518865,0.238490624305342,0,0,2.18638648103376,0.860234595106124,2.08284300964557,0.56530794192401,1.25849830862972,1.37559020970034,1.46296476575767,3.35941786920128,2.13459757612026,4.68608857870538,1.61131726843659,2.28081631715554,2.68468263302986,0.367663080345869,2.43042584364528,1.96459402224975,1.79623498100936,1.80178368773316,1.53316637465883,1.89853131913626,0.549605231791222,0,0,0,5.4666914686485,2.91250176828533,3.04541115870403,4.87622255272983,1.06400514659507,2.24271040056923,2.1349799145941,0.98667019366864,8.40269795579369,2.2900814251847,3.92308567472301,0.908144565869588,1.72852777344,0.468642863667593,0.624320153660641,0.570471821544449,3.13842229158782,2.70099346880659,5.34180716414834,5.19667984798319,2.65400422631361,2.33385202892359,3.09977343527296,3.56400857184616,8.15980866619238,0,1.43723628363248,1.34668891163253,4.37914819551875,1.6623846929051,2.19488810440419,4.59731693698529,6.76071265079686,2.26864366320042,18.6565221116416,2.77624605464138,4.66250182551036,9.90300617078528,2.67936576019941,13.912589162464,3.53622027030021,24.3037918427423,12.277062650311,15.9033277773792,4.32634523618807,1.93975268182574,29.8208057713956,12.3925080819998,5.59549954624609,0,0,0,0.121973706129595,0.397589304964456,0.813357600086629,0.207322110030741,1.26160425437814,0.36497735907583,1.56449532329816,2.57296375277154,2.76269842704961,6.96551892047969,5.0531563716871,0,0,0,0,0,0,0,0,0.38474715694639,0,0,2.4694440679884,7.3504355692771,1.26755034821831,0.982827216677626,3.54473944008842,0,0,0.857839051492628,0,0,0,0,0.977424915930974,1.03993478527958,1.44331342025273,0.695582429850461,0.939269553886573,1.58803092537181,0.925971025153221,1.52203321787679,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,1.65094525159639,2.67391897890794,1.17217447210047,3.4214489204541,2.36503233217644,0,4.28739648945867,0.112131084345361,0.43596006883328,0.80672114403045,1.80980402060889,3.57656445851882,5.917119267892,4.25500986535793,1.04007436911366,0.257207374262142,0,0,2.28764789853036,1.08524321078289,0.823240336780769,1.30294473717494,2.84313558994037,0,1.50719688529793,1.74306691720059,2.19940580600526,0,0,0,1.19812427745791,3.44585807502342,1.42636905040718,6.80472141337622,8.21905290201534,8.95304816199478,0,0,0,0,7.11464947822898,2.60279707715243,3.86644406388848,1.67516265334349,1.27587750330633,0,0,0,4.41689370188904,1.50051156317903,0,6.03115498439341,7.85087550707512,5.20417969611984,2.92853537481783,3.31040709700491,4.5481500811197,1.03473071292505,1.99267679560631,3.13427586520895,2.60650843404249,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,7.69134204238208,42.6624285740814,13.1910244383545,5.63812256725084,6.14048698880044,9.97294311090366,14.8418066444991,1.54209693802656,1.59805552781814,1.39616165223476,2.59627214591811,1.16210378459959,0.120859449591622,0.40101294060657,0,2.29628896329214,1.0925470080403,1.96686622439136,0,1.77135275340154,1.56869953835371,4.38417673959782,1.16106791782163,3.4120015221269,0.510281115829547,1.94324324491925,1.54227252690289,0,0.501689773854853,0.509752546090077,0,0.895499018888713,0,0,0.256450125116389,0.984043937099117,0.325378394664303,3.81251743096572,0.0915694648183434,0.41254749960294,0.574265537996172,0,11.2478750890912,0.870036464629098,2.31072925671967,1.22802939780904,1.7918754422989,4.51165028446749,4.64053420525531,1.78975917573812,1.78064071293475,0.165284915360978,0,1.02090169995667,0.30347334256665,0.929691098594572,2.83331112147576,0.6970372701606,1.84820148105653,0,1.73986598415015,1.11194531462352,2.43312307461385,0.744316738719335,3.16379424718726,9.91277008403889,1.535386747868,4.2793898803392,1.59101623962968,0,4.31693898199955,3.29444435683266,3.29874726567922,1.01091240786658,0,0.421258456238981,0.975267478179181,1.70599442741899,1.05650146756755,0.682499557039929,1.41405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,4.59126326432643,1.01455188481352,1.239293992399,0.845086807596724,1.29070216983646,3.7334635584986,1.07001315444375,1.41904425628239,3.79993743535795,4.93942339439853,0.7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22147241232,3.71995018166751,4.62175628631418,2.16313281061895,0,0.218531143927391,4.56114603641173,0,0,0,0,5.60762366814972,7.77095977452918,2.48750831837634,4.55105181792339,1.91910583710883,4.76128862927481,0.581300188524055,1.80016671457988,0.784923038064294,3.37329938874274,5.2550469129137,1.52401723527873,2.73786640868225,0.336760265072938,2.438554983351,5.98788641782824,0.0814032686109745,1.70763753404345,0,1.70667884002515,9.38563769613817,4.52293343476606,6.51033885305182,13.3151354837103,3.01910690386539,0 | |||
|short_description=p2@PRKD1 | |||
}} |
Latest revision as of 16:37, 19 September 2015
Short description: | p2@PRKD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000415220_5end |
EntrezGene: | PRKD1 |
HGNC: | 9407 |
UniProt: | F8WBA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-15 | 76 |
fat cell | 7.17e-09 | 15 |
skin fibroblast | 1.10e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.86e-13 | 240 |
structure with developmental contribution from neural crest | 4.94e-13 | 132 |
adult organism | 1.98e-12 | 114 |
neural tube | 3.56e-12 | 56 |
neural rod | 3.56e-12 | 56 |
future spinal cord | 3.56e-12 | 56 |
neural keel | 3.56e-12 | 56 |
tube | 4.15e-11 | 192 |
epithelium | 9.20e-11 | 306 |
regional part of nervous system | 9.99e-11 | 53 |
regional part of brain | 9.99e-11 | 53 |
central nervous system | 2.99e-10 | 81 |
cell layer | 3.28e-10 | 309 |
neural plate | 8.98e-10 | 82 |
presumptive neural plate | 8.98e-10 | 82 |
regional part of forebrain | 2.83e-09 | 41 |
forebrain | 2.83e-09 | 41 |
anterior neural tube | 2.83e-09 | 41 |
future forebrain | 2.83e-09 | 41 |
brain grey matter | 3.43e-09 | 34 |
gray matter | 3.43e-09 | 34 |
neurectoderm | 1.92e-08 | 86 |
regional part of telencephalon | 2.13e-08 | 32 |
brain | 2.82e-08 | 68 |
future brain | 2.82e-08 | 68 |
nervous system | 3.10e-08 | 89 |
telencephalon | 4.66e-08 | 34 |
cerebral hemisphere | 1.51e-07 | 32 |
cerebral cortex | 2.05e-07 | 25 |
pallium | 2.05e-07 | 25 |
ecto-epithelium | 4.51e-07 | 104 |
integument | 9.26e-07 | 46 |
integumental system | 9.26e-07 | 46 |