FFCP PHASE1:Hg19::chr8:22422749..22422822,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:22422749..22422822,+
|short_description=p5@SORBS3
|description=CAGE_peak_5_at_SORBS3_5end
|association_with_transcript=0bp_to_ENST00000519453,ENST000005239...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10174 | |EntrezGene=10174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |HGNC=30907 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJP2 | |UniProt=E5RJP2 | ||
|association_with_transcript=0bp_to_ENST00000519453,ENST00000523900_5end | |||
|cluster_id=chr8:22422749..22422822,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_SORBS3_5end | |||
|id=chr8:22422749..22422822,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.05e-23!246;CL:0002321!1.58e-23!248;CL:0000055!7.24e-21!180;CL:0000222!4.94e-20!119;CL:0000066!3.62e-13!254;CL:0000183!6.40e-13!59;CL:0000187!1.65e-11!54;CL:0000680!1.85e-11!57;CL:0000056!1.85e-11!57;CL:0000355!1.85e-11!57;CL:0000393!7.03e-10!60;CL:0000211!7.03e-10!60;CL:0000192!1.37e-08!42;CL:0000514!1.37e-08!42;CL:1000449!1.62e-08!16;CL:1000497!3.10e-08!18;CL:0002518!3.10e-08!18;CL:0000057!4.10e-08!75;CL:0000213!2.02e-07!57;CL:0000215!2.02e-07!57;CL:0002681!8.64e-07!13;CL:0002584!8.64e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.52e-09;15!CL:1000497;9.04e-09;17!CL:0002518;9.04e-09;17!CL:0002681;1.04e-07;12!CL:0002584;1.04e-07;12!CL:1000507;1.11e-07;10!CL:1000494;1.11e-07;10!CL:0000187;4.91e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.84e-22,250;CL:0000222,1.46e-19,121;CL:0000187,3.77e-11,55;CL:0000680,4.00e-11,58;CL:0000056,4.00e-11,58;CL:0000355,4.00e-11,58;CL:0000066,4.33e-11,253;CL:1000449,1.64e-09,15;CL:0000393,2.57e-09,61;CL:0000211,2.57e-09,61;CL:1000497,9.71e-09,17;CL:0002518,9.71e-09,17;CL:0000057,2.46e-08,76;CL:0000192,3.67e-08,43;CL:0000514,3.67e-08,43;CL:0002681,1.09e-07,12;CL:0002584,1.09e-07,12;CL:1000507,1.33e-07,10;CL:1000494,1.33e-07,10;CL:0000213,2.98e-07,58;CL:0000215,2.98e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000355;5.20e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.18e-22!347;UBERON:0000119!7.50e-21!312;UBERON:0000483!6.83e-20!309;UBERON:0000475!1.16e-18!365;UBERON:0005256!1.47e-17!143;UBERON:0002100!9.84e-17!216;UBERON:0003914!1.11e-16!118;UBERON:0000490!2.83e-15!138;UBERON:0003104!3.06e-15!238;UBERON:0009142!3.06e-15!238;UBERON:0000468!9.86e-13!659;UBERON:0002049!1.18e-11!79;UBERON:0007798!1.18e-11!79;UBERON:0000477!3.84e-11!286;UBERON:0000467!6.36e-11!625;UBERON:0000914!1.02e-10!83;UBERON:0002329!1.02e-10!83;UBERON:0003077!1.02e-10!83;UBERON:0003059!1.02e-10!83;UBERON:0007282!1.02e-10!83;UBERON:0009618!1.02e-10!83;UBERON:0007285!1.02e-10!83;UBERON:0000480!1.19e-10!626;UBERON:0006554!1.56e-10!44;UBERON:0002113!2.23e-10!27;UBERON:0003918!2.23e-10!27;UBERON:0005095!2.23e-10!27;UBERON:0007687!2.23e-10!27;UBERON:0000025!2.62e-10!194;UBERON:0004290!3.70e-10!70;UBERON:0002385!4.91e-10!63;UBERON:0001015!4.91e-10!63;UBERON:0000383!4.91e-10!63;UBERON:0004111!5.94e-10!241;UBERON:0001008!9.13e-10!45;UBERON:0000486!9.64e-10!82;UBERON:0003103!1.09e-09!69;UBERON:0001134!1.09e-09!61;UBERON:0002036!1.09e-09!61;UBERON:0003082!1.09e-09!61;UBERON:0005172!1.14e-09!55;UBERON:0005173!1.14e-09!55;UBERON:0004872!1.44e-09!84;UBERON:0002417!3.60e-09!61;UBERON:0000916!3.60e-09!61;UBERON:0009569!4.30e-09!113;UBERON:0000922!4.39e-09!612;UBERON:0002050!1.55e-08!605;UBERON:0005423!1.55e-08!605;UBERON:0004211!1.62e-08!16;UBERON:0001285!1.62e-08!16;UBERON:0007684!1.62e-08!16;UBERON:0003220!1.62e-08!16;UBERON:0004208!1.62e-08!16;UBERON:0001981!2.44e-08!60;UBERON:0007500!2.44e-08!60;UBERON:0004537!2.44e-08!60;UBERON:0006965!2.44e-08!60;UBERON:0000923!2.70e-08!604;UBERON:0005291!2.70e-08!604;UBERON:0006598!2.70e-08!604;UBERON:0002532!2.70e-08!604;UBERON:0000055!3.55e-08!69;UBERON:0006555!4.16e-08!17;UBERON:0005103!4.16e-08!17;UBERON:0000083!4.16e-08!17;UBERON:0009201!4.16e-08!17;UBERON:0004819!4.16e-08!17;UBERON:0006553!4.16e-08!17;UBERON:0003074!4.16e-08!17;UBERON:0003060!4.16e-08!17;UBERON:0000489!4.21e-08!32;UBERON:0005177!4.39e-08!107;UBERON:0000080!7.56e-08!18;UBERON:0002120!7.56e-08!18;UBERON:0004875!7.56e-08!18;UBERON:0005721!7.56e-08!18;UBERON:0005754!7.56e-08!18;UBERON:0007297!7.56e-08!18;UBERON:0000064!7.64e-08!219;UBERON:0001048!1.02e-07!168;UBERON:0001637!1.19e-07!42;UBERON:0003509!1.19e-07!42;UBERON:0004572!1.19e-07!42;UBERON:0004535!2.30e-07!110;UBERON:0001009!2.52e-07!113;UBERON:0001851!3.41e-07!16;UBERON:0003064!6.03e-07!37;UBERON:0001225!8.64e-07!13;UBERON:0008987!8.64e-07!13;UBERON:0004876!8.82e-07!20;UBERON:0000353!9.60e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.23e-11;24!UBERON:0011143;1.23e-11;24!UBERON:0006554;1.52e-10;30!UBERON:0001008;1.52e-10;30!UBERON:0006555;1.52e-09;15!UBERON:0004819;1.52e-09;15!UBERON:0001285;1.52e-09;15!UBERON:0007684;1.52e-09;15!UBERON:0000489;1.38e-08;29!UBERON:0001851;5.13e-08;15!UBERON:0001225;1.04e-07;12!UBERON:0008987;1.04e-07;12!UBERON:0004211;1.11e-07;10!UBERON:0009773;1.11e-07;10!UBERON:0001231;1.11e-07;10!UBERON:0004810;1.11e-07;10!UBERON:0005172;1.32e-07;52!UBERON:0005173;1.32e-07;52!UBERON:0003914;1.61e-07;74!UBERON:0000353;1.85e-07;15 | |||
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|short_description=p5@SORBS3 | |||
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Latest revision as of 11:33, 17 September 2015
Short description: | p5@SORBS3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SORBS3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000519453, ENST00000523900_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | E5RJP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.84e-22 | 250 |
mesodermal cell | 1.46e-19 | 121 |
muscle cell | 3.77e-11 | 55 |
muscle precursor cell | 4.00e-11 | 58 |
myoblast | 4.00e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.00e-11 | 58 |
epithelial cell | 4.33e-11 | 253 |
epithelial cell of nephron | 1.64e-09 | 15 |
electrically responsive cell | 2.57e-09 | 61 |
electrically active cell | 2.57e-09 | 61 |
kidney cell | 9.71e-09 | 17 |
kidney epithelial cell | 9.71e-09 | 17 |
fibroblast | 2.46e-08 | 76 |
smooth muscle cell | 3.67e-08 | 43 |
smooth muscle myoblast | 3.67e-08 | 43 |
kidney cortical cell | 1.09e-07 | 12 |
renal cortical epithelial cell | 1.09e-07 | 12 |
kidney tubule cell | 1.33e-07 | 10 |
nephron tubule epithelial cell | 1.33e-07 | 10 |
lining cell | 2.98e-07 | 58 |
barrier cell | 2.98e-07 | 58 |