FFCP PHASE1:Hg19::chr17:2699697..2699769,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29176 | |||
|TSSclassifier=strong | |||
|UniProt=Q684P5 | |||
|association_with_transcript=0bp_to_ENST00000254695,ENST00000366401,ENST00000540393,NM_001100398,NM_015085,uc010ckd.2,uc010cke.2_5end | |||
|cluster_id=chr17:2699697..2699769,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_RAP1GAP2_5end | |||
|id=chr17:2699697..2699769,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.32e-75!172;CL:0000566!6.32e-75!172;CL:0002032!1.05e-69!165;CL:0000837!1.05e-69!165;CL:0000988!3.27e-67!182;CL:0000738!8.25e-66!140;CL:0002087!3.77e-54!119;CL:0002031!3.62e-53!124;CL:0000763!1.79e-47!112;CL:0000049!1.79e-47!112;CL:0000766!5.80e-42!76;CL:0000839!4.34e-35!70;CL:0000557!4.65e-34!71;CL:0002194!3.83e-32!63;CL:0000576!3.83e-32!63;CL:0000040!3.83e-32!63;CL:0000559!3.83e-32!63;CL:0002009!2.39e-30!65;CL:0002057!1.55e-28!42;CL:0000860!3.58e-28!45;CL:0000542!1.86e-18!53;CL:0000051!1.86e-18!53;CL:0000838!2.20e-18!52;CL:0000084!1.39e-14!25;CL:0000827!1.39e-14!25;CL:0000791!5.23e-14!18;CL:0000789!5.23e-14!18;CL:0002420!5.23e-14!18;CL:0002419!5.23e-14!18;CL:0000790!5.23e-14!18;CL:0000134!7.49e-10!358;CL:0000625!1.08e-09!11;CL:0002393!3.92e-09!9;CL:0002397!3.92e-09!9;CL:0002320!7.03e-09!365;CL:0000094!2.78e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.56e-23;33!CL:0002057;9.56e-23;33!CL:0000576;2.80e-22;48!CL:0000473;1.02e-21;39!CL:0000234;1.02e-21;39!CL:0000766;6.34e-21;69!CL:0000763;3.52e-17;100!CL:0000791;1.33e-16;18!CL:0000789;1.33e-16;18!CL:0002419;1.33e-16;18!CL:0002087;1.42e-15;104!CL:0000084;1.63e-15;25!CL:0000738;6.51e-15;136!CL:0000988;6.92e-12;177!CL:0000625;2.30e-11;11!CL:0000542;3.53e-10;53!CL:0000094;1.18e-09;8!CL:0002393;1.66e-07;6!CL:0002397;1.66e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.08e-81,168;CL:0002032,1.10e-75,161;CL:0000837,1.10e-75,161;CL:0000988,4.09e-74,177;CL:0000738,8.82e-71,136;CL:0002087,1.00e-57,115;CL:0002031,4.83e-56,120;CL:0000763,1.35e-55,108;CL:0000049,1.35e-55,108;CL:0000766,7.13e-50,72;CL:0000557,1.59e-40,67;CL:0000839,1.59e-39,66;CL:0002194,5.40e-38,59;CL:0000576,5.40e-38,59;CL:0000040,5.40e-38,59;CL:0000559,5.40e-38,59;CL:0000473,5.44e-37,48;CL:0000234,5.44e-37,48;CL:0002009,4.86e-36,61;CL:0000860,4.43e-34,42;CL:0002057,4.43e-34,42;CL:0000838,1.94e-17,52;CL:0000542,7.55e-17,53;CL:0000051,7.55e-17,53;CL:0000791,1.49e-16,18;CL:0000789,1.49e-16,18;CL:0002420,1.49e-16,18;CL:0002419,1.49e-16,18;CL:0000790,1.49e-16,18;CL:0000084,1.83e-15,25;CL:0000827,1.83e-15,25;CL:0000134,5.85e-15,354;CL:0002320,6.58e-14,361;CL:0000625,2.36e-11,11;CL:0002393,1.11e-10,9;CL:0002397,1.11e-10,9;CL:0000219,2.42e-10,386;CL:0000094,1.17e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-24;42!CL:0000790;1.33e-16;18!CL:0000049;1.52e-15;108!CL:0000051;3.53e-10;53 | |||
|ontology_enrichment_disease=DOID:1240!1.17e-09!39;DOID:2531!1.71e-07!51;DOID:0060083!1.71e-07!51;DOID:8692!2.60e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.33e-08;31!DOID:1240;1.93e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.94e-09,39;DOID:8692,1.45e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.35e-38!102;UBERON:0003061!1.35e-38!102;UBERON:0002193!6.21e-34!112;UBERON:0002371!2.52e-29!80;UBERON:0001474!2.66e-25!86;UBERON:0007023!4.17e-23!115;UBERON:0002405!6.55e-20!115;UBERON:0004765!6.78e-19!101;UBERON:0001434!6.78e-19!101;UBERON:0002384!2.35e-08!375;UBERON:0000178!3.80e-08!15;UBERON:0000179!3.80e-08!15;UBERON:0000463!3.80e-08!15;UBERON:0003081!1.08e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.33e-10;15!UBERON:0000179;6.33e-10;15!UBERON:0000463;6.33e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.14e-47,98;UBERON:0003061,3.14e-47,98;UBERON:0002193,2.57e-42,108;UBERON:0002371,1.66e-35,76;UBERON:0002405,3.54e-33,93;UBERON:0001474,3.73e-31,82;UBERON:0004765,2.62e-26,90;UBERON:0001434,2.85e-22,100;UBERON:0002384,3.42e-13,371;UBERON:0003081,3.26e-11,203;UBERON:0000178,6.27e-10,15;UBERON:0000179,6.27e-10,15;UBERON:0000463,6.27e-10,15;UBERON:0007023,2.29e-08,114;UBERON:0002204,9.48e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,41.3032490691349,44.5242101792767,38.2395824590708,0,0,0,0,0,7.63361142270603,63.155476572634,65.7785787702065,60.7630438004385,7.61312612415743,7.77344798445551,6.95454032612304,17.8839833698865,15.87078963493,18.1938045890862,12.7835970298127,15.2132118568076,23.5376841880279,11.7953880852082,17.931249457037,12.0605937243178,22.0637235671436,28.4013260776883,46.0450054420762,11.1062980330137,11.1891521523717,8.98893937780339,13.4676912643197,10.9115869205872,22.3767994029664,12.8642007072819,17.9517291859469,18.7538890234385,13.0594157382863,14.1846306172785,12.4564449799115,17.8386552332288,25.0311800841697,18.67824064464,14.5295880632009,15.8359383474653,14.2408074348398,46.0536524160033,50.1746147917503,41.3027531651501,37.6300914340759,33.3392702108144,28.2877032586861,88.0689378160458,82.7493377148215,66.1244236627975,21.1195493353587,14.7457425040775,12.4531295540898,8.10787422876364,8.00791974072025,8.62128659931725,13.8819423284821,10.494591299889,7.39976859842283,16.4426413023863,11.4681968437569,13.2171328579026,21.2993253932984,8.16490662802739,25.7689798849121,37.7290332239198,40.0922923049043,30.4279421611034,10.7554347989085,16.5706732007157,25.3274746930285,23.0619645752309,40.6556152315275,28.3563385067035,45.2242452487576,26.6429945029404,19.3788427864219,13.8127839867088,17.6864011382943,19.1270036585135,11.4180653634787,13.3770414044857,29.2699466653935,35.6924429497333,39.4717108409979,29.5519603115062,34.9167174986914,26.1223639745759,26.0433381542567,31.3649174667963,33.2771013161878,38.7799431797888,36.2299107001803,32.4384835300303,30.3817358860787,49.1920453468347,70.3367714910624,37.0750473939965,0,0,0,0,0,0.579386075843295,0,0,0,0,0.43917392846563,3.07800827419625,0,0,2.27183175558278,5.57215159357655,3.58986493400936,24.3260436791449,23.4517913419852,32.3168026156722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.7504462872773,89.1894607541148,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,1.96565443335525,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41677413392274,4.91408956792399,3.12125440806329,0,0,0,0,0,0,3.94130590316755,11.3582479877062,20.1108272074549,19.6003136647068,17.2952133794141,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,6.52934218861764,6.32501818449095,0,0,0,0,0,0,2.01753259188349,66.9904584686552,80.860340572319,73.0271876431768,0,0,0,0,0,56.9245338199859,68.8071356169257,88.2705043618756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.041589564175,45.5156963727282,46.6399427601052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,1.12972560932135,0,0,0,0,62.4160559355568,75.6990835070952,71.7755455839445,48.3610504179312,59.6475295974982,68.738170986428,71.2841497154312,75.3468917479557,0,0,0.245040215981032,0.371606350251437,0.721346064882224,2.34768083049767,11.7975441819329,7.58401611444703,18.5760209028396,21.3790318551122,0,3.36956613736151,21.4540598291201,2.82023812391442,65.1649640434175,19.1299708915812,6.90528722945908,3.63239472943886,3.40676990152261,16.1447512035209,1.53620382154229,0.223676107892416,1.00109485027145,5.27547857585509,0,0,7.57275899732753,10.6583029759302,19.7381807122989,2.24568648489864,1.17206543417515,0,17.1622811787317,0,0.23874448473769,0,0,0,1.82870241333667,0,0,0,0.597743964753209,3.59169090190492,0,0,0,0,0,0,4.60415133204185,0.789147245095469,40.7121256989798,0,3.87733098438087,2.59750674853184,0,0,0,0,0,0,0,0,0,0.173624994933292,0,1.08536794762867,1.52581736317083,0.774054819518572,0.591095237907095,0.658156191461918,0.653630781113941,0,0.769502585037971,0.455768223388005,0,0,0,0,0,0,14.3070617474031,4.86638794824577,5.65119718460532,0,0,0,0,8.74151184392083,0,0,0,0,5.97157158647103,1.68069372556344,0,0,0,0,1.41542379259422,1.60515529459758,0.702793337176017,0,0.19566461893209,0,0,1.20990716048664,0,4.86536663139357,0,0,0,0.330991955875499,0,0,0,0,0,0,0,1.22308667769421,0,0.19351266257817,0.219267951258557,0.246346371159628,0.872901148395775,0,0.225980740780532,0,0.19871461170299,2.40581024632339,0,0,2.98834192635094,0.599428828746391,0,0,0,0.14405479798815,0,0,0,0.209205692624666,0.101998217636322,0,0,2.32739144116388,54.9310328687981,0,0.525774708558629,0.558564802544508,0.916641696046735,2.15361907373044,0,0.858452096273142,0.223171457441873,0.335917362433631,0,0,0,0,0,0,1.43944664511834,0.795229689809303,1.49823746722733,0,0,0,0,0,3.40197517284938,0,0.236417121897595,0.209818352539992,0,8.60579228797655,0,0.714695326373367,1.32418394073086,0,0,0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| |||
|short_description=p1@RAP1GAP2 | |||
}} |
Latest revision as of 06:52, 19 September 2015
Short description: | p1@RAP1GAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAP1GAP2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000254695, ENST00000366401, ENST00000540393, NM_001100398, NM_015085, uc010ckd.2, uc010cke.2_5end |
EntrezGene: | RAP1GAP2 |
HGNC: | 29176 |
UniProt: | Q684P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.14e-47 | 98 |
blood island | 3.14e-47 | 98 |
hemolymphoid system | 2.57e-42 | 108 |
bone marrow | 1.66e-35 | 76 |
immune system | 3.54e-33 | 93 |
bone element | 3.73e-31 | 82 |
skeletal element | 2.62e-26 | 90 |
skeletal system | 2.85e-22 | 100 |
connective tissue | 3.42e-13 | 371 |
lateral plate mesoderm | 3.26e-11 | 203 |
blood | 6.27e-10 | 15 |
haemolymphatic fluid | 6.27e-10 | 15 |
organism substance | 6.27e-10 | 15 |
adult organism | 2.29e-08 | 114 |
musculoskeletal system | 9.48e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.94e-09 | 39 |
myeloid leukemia | 1.45e-08 | 31 |