FFCP PHASE1:Hg19::chr17:72667462..72667471,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=326624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30268 | |||
|TSSclassifier=strong | |||
|UniProt=A8MUU7 | |||
|association_with_transcript=143bp_to_ENST00000392617_5end | |||
|cluster_id=chr17:72667462..72667471,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_11_at_RAB37_5end | |||
|id=chr17:72667462..72667471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!4.92e-47!15;UBERON:0003057!4.92e-47!15;UBERON:0001049!1.19e-46!57;UBERON:0005068!1.19e-46!57;UBERON:0006241!1.19e-46!57;UBERON:0007135!1.19e-46!57;UBERON:0004733!2.75e-45!12;UBERON:0002028!2.75e-45!12;UBERON:0007277!2.75e-45!12;UBERON:0004732!9.04e-42!13;UBERON:0002616!2.18e-39!59;UBERON:0000955!5.38e-33!69;UBERON:0006238!5.38e-33!69;UBERON:0001017!1.29e-31!82;UBERON:0002680!1.88e-31!9;UBERON:0001895!1.88e-31!9;UBERON:0010092!1.88e-31!9;UBERON:0003075!1.86e-30!86;UBERON:0007284!1.86e-30!86;UBERON:0005743!4.35e-30!86;UBERON:0002346!4.97e-29!90;UBERON:0000073!4.13e-27!94;UBERON:0001016!4.13e-27!94;UBERON:0002298!1.31e-22!8;UBERON:0007023!1.50e-22!115;UBERON:0000033!6.84e-18!123;UBERON:0002037!8.67e-18!6;UBERON:0006215!8.67e-18!6;UBERON:0000153!5.60e-17!129;UBERON:0007811!5.60e-17!129;UBERON:0000988!5.38e-16!3;UBERON:0001896!8.44e-16!3;UBERON:0005290!8.44e-16!3;UBERON:0010096!8.44e-16!3;UBERON:0002780!9.70e-16!41;UBERON:0001890!9.70e-16!41;UBERON:0006240!9.70e-16!41;UBERON:0003080!2.36e-15!42;UBERON:0001893!1.28e-14!34;UBERON:0004121!2.25e-14!169;UBERON:0000924!5.35e-14!173;UBERON:0006601!5.35e-14!173;UBERON:0001950!5.57e-13!20;UBERON:0002581!1.25e-12!1;UBERON:0000025!2.03e-12!194;UBERON:0002902!3.45e-12!1;UBERON:0009899!3.45e-12!1;UBERON:0007190!3.85e-12!1;UBERON:0002336!4.31e-12!1;UBERON:0001018!4.31e-12!1;UBERON:0002473!4.31e-12!1;UBERON:0005340!4.31e-12!1;UBERON:0002316!4.31e-12!1;UBERON:0003544!4.31e-12!1;UBERON:0001020!4.31e-12!1;UBERON:0005970!4.31e-12!1;UBERON:0002437!4.31e-12!1;UBERON:0002619!7.57e-12!22;UBERON:0001869!1.46e-11!32;UBERON:0002791!3.33e-11!33;UBERON:0002020!6.06e-11!34;UBERON:0003528!6.06e-11!34;UBERON:0000956!1.80e-10!25;UBERON:0000203!1.80e-10!25;UBERON:0003056!2.19e-10!61;UBERON:0001872!6.51e-10!5;UBERON:0004111!1.43e-09!241;UBERON:0000477!6.09e-09!286;UBERON:0000200!2.71e-08!6;UBERON:0000064!6.70e-08!219;UBERON:0000483!5.89e-07!309;UBERON:0002148!6.80e-07!2;UBERON:0009662!6.80e-07!2;UBERON:0000119!7.24e-07!312;UBERON:0001876!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;1.37e-87;9!UBERON:0001895;1.37e-87;9!UBERON:0002037;2.58e-74;6!UBERON:0004733;5.11e-66;12!UBERON:0002028;5.11e-66;12!UBERON:0004732;4.89e-61;13!UBERON:0000988;1.12e-17;3!UBERON:0000073;5.12e-11;53!UBERON:0002616;5.12e-11;53!UBERON:0002298;1.57e-09;6!UBERON:0001016;1.26e-08;83!UBERON:0000955;5.90e-08;68!UBERON:0001017;8.49e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.37e-87,9;UBERON:0001895,1.37e-87,9;UBERON:0010092,1.37e-87,9;UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0004733,5.11e-66,12;UBERON:0002028,5.11e-66,12;UBERON:0007277,5.11e-66,12;UBERON:0004732,4.89e-61,13;UBERON:0003076,4.60e-53,15;UBERON:0003057,4.60e-53,15;UBERON:0000988,1.12e-17,3;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0002298,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0007023,8.86e-08,114;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p11@RAB37 | |||
}} |
Latest revision as of 08:42, 17 September 2015
Short description: | p11@RAB37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RAB37_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 143bp_to_ENST00000392617_5end |
EntrezGene: | RAB37 |
HGNC: | 30268 |
UniProt: | A8MUU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 1.37e-87 | 9 |
metencephalon | 1.37e-87 | 9 |
future metencephalon | 1.37e-87 | 9 |
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
segmental subdivision of hindbrain | 5.11e-66 | 12 |
hindbrain | 5.11e-66 | 12 |
presumptive hindbrain | 5.11e-66 | 12 |
segmental subdivision of nervous system | 4.89e-61 | 13 |
posterior neural tube | 4.60e-53 | 15 |
chordal neural plate | 4.60e-53 | 15 |
pons | 1.12e-17 | 3 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
brainstem | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
adult organism | 8.86e-08 | 114 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |