FFCP PHASE1:Hg19::chr18:52626622..52626709,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24350 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2F9 | |||
|association_with_transcript=29bp_to_ENST00000337363,NM_025214,uc002lft.2_5end | |||
|cluster_id=chr18:52626622..52626709,- | |||
|description=CAGE_peak_1_at_CCDC68_5end | |||
|id=chr18:52626622..52626709,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.91e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!9.98e-26!347;UBERON:0000922!2.65e-17!612;UBERON:0000468!3.09e-17!659;UBERON:0002050!4.70e-17!605;UBERON:0005423!4.70e-17!605;UBERON:0000923!1.07e-16!604;UBERON:0005291!1.07e-16!604;UBERON:0006598!1.07e-16!604;UBERON:0002532!1.07e-16!604;UBERON:0004119!2.27e-16!169;UBERON:0000925!2.27e-16!169;UBERON:0006595!2.27e-16!169;UBERON:0004921!2.74e-16!129;UBERON:0004185!2.74e-16!129;UBERON:0007023!1.86e-15!115;UBERON:0001007!3.03e-15!155;UBERON:0001555!3.03e-15!155;UBERON:0007026!3.03e-15!155;UBERON:0000477!3.83e-15!286;UBERON:0000062!8.31e-15!511;UBERON:0003104!2.58e-14!238;UBERON:0009142!2.58e-14!238;UBERON:0000467!1.57e-13!625;UBERON:0000480!2.88e-13!626;UBERON:0000119!6.33e-12!312;UBERON:0000483!1.54e-11!309;UBERON:0000077!2.03e-11!130;UBERON:0001048!4.39e-11!168;UBERON:0004111!1.07e-10!241;UBERON:0005409!1.34e-09!35;UBERON:0000160!1.96e-09!27;UBERON:0000466!2.36e-09!126;UBERON:0000926!5.43e-09!448;UBERON:0004120!5.43e-09!448;UBERON:0006603!5.43e-09!448;UBERON:0000025!5.62e-09!194;UBERON:0001041!1.25e-08!98;UBERON:0000064!4.87e-07!219;UBERON:0000059!7.13e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.95e-10;22!UBERON:0000160;1.01e-09;17!UBERON:0004921;4.49e-09;33!UBERON:0000059;3.27e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.17e-16,223;UBERON:0004119,2.58e-16,160;UBERON:0000925,2.58e-16,160;UBERON:0006595,2.58e-16,160;UBERON:0004921,4.35e-16,118;UBERON:0007023,3.09e-15,114;UBERON:0001007,9.20e-15,145;UBERON:0001555,9.20e-15,145;UBERON:0007026,9.20e-15,145;UBERON:0003104,3.41e-10,160;UBERON:0009142,3.41e-10,160;UBERON:0001048,3.44e-10,160;UBERON:0000922,4.53e-10,592;UBERON:0005409,8.14e-10,25;UBERON:0000160,9.32e-10,17;UBERON:0005423,1.23e-09,581;UBERON:0000923,3.54e-09,560;UBERON:0010316,3.54e-09,560;UBERON:0005291,3.54e-09,560;UBERON:0006598,3.54e-09,560;UBERON:0010317,3.54e-09,560;UBERON:0002532,3.54e-09,560;UBERON:0000119,4.13e-09,309;UBERON:0002050,6.35e-09,564;UBERON:0000483,9.28e-09,306;UBERON:0001041,3.33e-08,87;UBERON:0004111,1.03e-07,240;UBERON:0000059,2.72e-07,11;UBERON:0005911,5.02e-07,82 | |||
|phase1_expression=2.72517568905835,4.49611100171065,0.563817616383885,2.00146596706261,0.893922188854576,0,0,2.52687949370732,0,1.47440361900905,2.09340350391728,1.74753097704138,1.31883489114227,33.0456162403324,40.4304798388057,0,0,0,0.487932798790507,0.61560529038394,1.63200552995402,0,1.14494394852423,5.74872585306114,3.76627918784408,0.0764134057479513,0,0,0,0,0,9.19421224478927,3.31326510656075,1.84877005083394,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0.755751887377619,0,0.232429036905685,0.822335776043652,0,0,0.512321413058201,0.47296445977717,0,0,0,0,1.09162460023138,0.449446968890169,0,0,0,0.659702600373432,0.598390972864896,0,0,0,0,0,1.0429658368404,1.08594422352558,3.02699751316684,0,0,0.211255286311942,1.06302149982522,0,0,0,0,0.285012743741249,1.79025009479181,0.730656615058536,0,0,0,0,0.400395987036012,0,1.32208974556972,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,2.04580098949649,0,0.50133791063589,1.88300474649071,0,0,3.59232305223458,3.76939975686359,2.19586964232815,6.7454223881322,0.364295288292542,1.11235332835329,0,0.348259474598534,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,1.69592382577203,4.19499436209906,1.37559020970034,1.46296476575767,1.29208379584664,2.84613010149368,2.00832367658802,0.402829317109147,0.760272105718513,0,1.83831540172934,3.24056779152704,3.48268940307911,2.69435247151404,3.60356737546631,0,0.949265659568129,0.366403487860815,0,0,2.18047026071267,0,0.759783069987479,0.794455084879313,0.860509862246441,0.354668382198357,5.04609840128076,1.06748995729705,0.98667019366864,12.1372303805909,21.5537075311501,20.2692759860689,8.93008823105095,21.31850920576,0.937285727335186,0.624320153660641,0,0.298897361103602,0.822041490506354,0.485618833104395,0.280901613404497,1.83738754129404,2.94802361548243,2.16984140469107,0,0.494533858557114,0.910161361938026,0.718618141816238,0.673344455816265,1.37630371859161,3.3247693858102,0.877955241761676,0,0.150238058906597,14.7461838108027,1.25572744982203,1.2813443329114,0,0,0,2.31876486041066,2.23340227597908,0,0,0.504867548488229,0.184099797284599,0,0.355009592516614,0.906768884048762,1.52604533079439,8.50347753918506,0,16.3478619371732,0.243947412259191,0.265059536642971,0.580969714347592,0.725627385107593,1.00928340350251,0,0,1.28648187638577,2.76269842704961,3.25057549622385,4.33127689001751,7.92655560266954,10.4522507848423,13.496617673475,10.4779274095774,8.27941887551143,11.1517190982215,8.08987848960986,7.06397274451246,12.3119090222845,0,1.40241773803446,0.8231480226628,1.47008711385542,6.33775174109154,11.7939266001315,20.0868568271677,0,8.24022538238861,6.17644117074692,5.37776398502265,1.1240175325762,1.60846355858609,4.44424536760942,0,0,5.77325368101093,3.36198174427723,4.46153038096122,0.577465791044295,0,0.951270761172991,0,0,0,0,0.148631162288728,0,0,0.992425680696705,0.0895585227028483,0,0.766765358330422,1.97065295158377,0.616339038092582,10.5737338925794,10.3766366460212,9.59442494040488,0,0,0,0,0.102827492703324,0,0.285826432630578,4.82163662685051,1.30788020649984,8.28722629776735,1.42198887333556,0,0.845302752556,2.39344304926383,2.08014873822732,5.40135485950498,8.5109479213967,5.59486575933809,25.0211488901758,1.62786481617433,3.29296134712308,2.60588947434988,22.0343008220378,7.12756685640086,16.2777263612176,20.9168030064071,10.597137065298,0,0,0,15.8152404624445,19.5265290917994,0,4.34343920002738,8.42452922456572,6.08807275015645,0,0,0,0,2.03275699377971,1.30139853857622,0,0.670065061337395,0,0,0,0,24.0475323769514,17.5059682370887,33.3655979150675,0,0,1.41932173530541,0,10.2321673907424,13.6444502433591,7.24311499047534,1.32845119707087,1.84369168541703,2.69339204851057,2.93701736194111,3.0882908142977,0.206768026122887,0.647142602455851,0.213455115606889,0.909382714338778,1.66435439510497,1.81434175997808,0.744323423456331,0.920771839728375,0.280660094433074,0.384417447767103,0,0.160853921143607,0,1.3878872442239,0.710246901252508,1.47828880824856,12.4621063004069,1.97557643381931,6.40555082835598,5.61418116849198,2.20994373446151,2.87036120411517,2.54927635209404,3.01586154406675,1.80479845162965,3.61972084390749,3.13739907670742,1.46139224653261,3.37765212457202,1.13733384070897,1.19065593693561,6.0456456508599,1.54227252690289,1.89662506280697,1.00337954770971,2.29388645740534,2.49322802678617,0.671624264166535,12.9363327221101,8.62736988382172,1.79515087581472,0.984043937099117,2.92840555197873,20.0929972713058,5.95201521319232,6.51825049372645,4.01985876597321,1.30012049207304,3.21367859688319,0.676695028044854,4.62145851343933,3.99109554287937,2.20538515975249,5.47843248828196,4.20548412351263,2.89770533214743,0,8.42953068340988,11.1470239071762,12.6336585369638,5.56367794705525,7.43752878875657,6.61105928344344,5.5762981612848,0.616067160352178,0,6.08953094452551,0.55597265731176,6.01124524316363,11.16475108079,14.2370741123427,10.865921053658,1.535386747868,18.8293154734925,0.95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| |||
|short_description=p1@CCDC68 | |||
}} |
Latest revision as of 20:21, 19 September 2015
Short description: | p1@CCDC68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC68_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000337363, NM_025214, uc002lft.2_5end |
EntrezGene: | CCDC68 |
HGNC: | 24350 |
UniProt: | Q9H2F9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.17e-16 | 223 |
endoderm-derived structure | 2.58e-16 | 160 |
endoderm | 2.58e-16 | 160 |
presumptive endoderm | 2.58e-16 | 160 |
subdivision of digestive tract | 4.35e-16 | 118 |
adult organism | 3.09e-15 | 114 |
digestive system | 9.20e-15 | 145 |
digestive tract | 9.20e-15 | 145 |
primitive gut | 9.20e-15 | 145 |
mesenchyme | 3.41e-10 | 160 |
entire embryonic mesenchyme | 3.41e-10 | 160 |
primordium | 3.44e-10 | 160 |
embryo | 4.53e-10 | 592 |
gastrointestinal system | 8.14e-10 | 25 |
intestine | 9.32e-10 | 17 |
developing anatomical structure | 1.23e-09 | 581 |
germ layer | 3.54e-09 | 560 |
germ layer / neural crest | 3.54e-09 | 560 |
embryonic tissue | 3.54e-09 | 560 |
presumptive structure | 3.54e-09 | 560 |
germ layer / neural crest derived structure | 3.54e-09 | 560 |
epiblast (generic) | 3.54e-09 | 560 |
cell layer | 4.13e-09 | 309 |
embryonic structure | 6.35e-09 | 564 |
epithelium | 9.28e-09 | 306 |
foregut | 3.33e-08 | 87 |
anatomical conduit | 1.03e-07 | 240 |
large intestine | 2.72e-07 | 11 |
endo-epithelium | 5.02e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.91e-07 | 106 |