FFCP PHASE1:Hg19::chr19:19174795..19174833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28380 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VD7 | |||
|association_with_transcript=0bp_to_ENST00000318596,NM_178526,uc002nlf.1_5end | |||
|cluster_id=chr19:19174795..19174833,+ | |||
|description=CAGE_peak_1_at_SLC25A42_5end | |||
|id=chr19:19174795..19174833,+ | |||
|ontology_enrichment_celltype=CL:0000838!7.77e-15!52;CL:0000542!7.97e-15!53;CL:0000051!7.97e-15!53;CL:0000236!1.37e-08!14;CL:0000945!1.66e-08!24;CL:0000826!1.66e-08!24;CL:0000791!1.88e-07!18;CL:0000789!1.88e-07!18;CL:0002420!1.88e-07!18;CL:0002419!1.88e-07!18;CL:0000790!1.88e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.02e-09;53!CL:0000945;1.55e-08;24!CL:0000236;1.90e-08;13!CL:0000791;1.29e-07;18!CL:0000789;1.29e-07;18!CL:0002419;1.29e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.17e-15,52;CL:0000542,7.35e-15,53;CL:0000051,7.35e-15,53;CL:0000236,1.32e-08,14;CL:0000945,1.59e-08,24;CL:0000826,1.59e-08,24;CL:0000791,1.81e-07,18;CL:0000789,1.81e-07,18;CL:0002420,1.81e-07,18;CL:0002419,1.81e-07,18;CL:0000790,1.81e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.02e-09;53!CL:0000790;1.29e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.84e-42!115;UBERON:0001049!5.34e-20!57;UBERON:0005068!5.34e-20!57;UBERON:0006241!5.34e-20!57;UBERON:0007135!5.34e-20!57;UBERON:0002616!2.73e-18!59;UBERON:0000955!1.57e-17!69;UBERON:0006238!1.57e-17!69;UBERON:0001017!1.87e-15!82;UBERON:0003080!5.36e-15!42;UBERON:0002780!9.73e-15!41;UBERON:0001890!9.73e-15!41;UBERON:0006240!9.73e-15!41;UBERON:0005743!1.31e-14!86;UBERON:0000073!4.38e-13!94;UBERON:0001016!4.38e-13!94;UBERON:0003075!6.32e-13!86;UBERON:0007284!6.32e-13!86;UBERON:0002346!6.82e-13!90;UBERON:0001893!1.01e-12!34;UBERON:0002020!1.24e-12!34;UBERON:0003528!1.24e-12!34;UBERON:0002791!3.63e-12!33;UBERON:0001869!4.75e-12!32;UBERON:0000153!2.38e-11!129;UBERON:0007811!2.38e-11!129;UBERON:0002619!1.29e-10!22;UBERON:0003056!4.49e-10!61;UBERON:0000033!9.18e-10!123;UBERON:0001950!9.90e-10!20;UBERON:0000956!6.28e-09!25;UBERON:0000203!6.28e-09!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.49e-11;53!UBERON:0002616;1.49e-11;53!UBERON:0001893;2.64e-11;34!UBERON:0002780;3.14e-11;41!UBERON:0001890;3.14e-11;41!UBERON:0007023;3.68e-11;114!UBERON:0003528;5.01e-11;34!UBERON:0002020;5.01e-11;34!UBERON:0001869;5.23e-11;32!UBERON:0002791;6.63e-11;32!UBERON:0002619;6.69e-11;22!UBERON:0001950;5.30e-10;20!UBERON:0000956;3.61e-09;25!UBERON:0000203;3.61e-09;25!UBERON:0000955;2.66e-08;68!UBERON:0001017;7.07e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.77e-42,114;UBERON:0001049,8.87e-20,56;UBERON:0005068,8.87e-20,56;UBERON:0006241,8.87e-20,56;UBERON:0007135,8.87e-20,56;UBERON:0000073,8.05e-19,53;UBERON:0002616,8.05e-19,53;UBERON:0000955,2.68e-17,68;UBERON:0006238,2.68e-17,68;UBERON:0001017,3.69e-15,81;UBERON:0002780,8.98e-15,41;UBERON:0001890,8.98e-15,41;UBERON:0003080,8.98e-15,41;UBERON:0006240,8.98e-15,41;UBERON:0003075,1.77e-14,82;UBERON:0007284,1.77e-14,82;UBERON:0002346,2.15e-14,86;UBERON:0001016,1.87e-13,89;UBERON:0001893,9.48e-13,34;UBERON:0003528,1.16e-12,34;UBERON:0002020,1.16e-12,34;UBERON:0001869,4.46e-12,32;UBERON:0002791,7.23e-12,32;UBERON:0002619,1.22e-10,22;UBERON:0003056,3.21e-10,61;UBERON:0001950,9.42e-10,20;UBERON:0010314,9.85e-10,132;UBERON:0000956,6.01e-09,25;UBERON:0000203,6.01e-09,25;UBERON:0010371,7.84e-08,104;UBERON:0011216,9.24e-07,223 | |||
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| |||
|short_description=p1@SLC25A42 | |||
}} |
Latest revision as of 19:17, 16 September 2015
Short description: | p1@SLC25A42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC25A42_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000318596, NM_178526, uc002nlf.1_5end |
EntrezGene: | SLC25A42 |
HGNC: | 28380 |
UniProt: | Q86VD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.17e-15 | 52 |
lymphocyte | 7.35e-15 | 53 |
common lymphoid progenitor | 7.35e-15 | 53 |
B cell | 1.32e-08 | 14 |
lymphocyte of B lineage | 1.59e-08 | 24 |
pro-B cell | 1.59e-08 | 24 |
mature alpha-beta T cell | 1.81e-07 | 18 |
alpha-beta T cell | 1.81e-07 | 18 |
immature T cell | 1.81e-07 | 18 |
mature T cell | 1.81e-07 | 18 |
immature alpha-beta T cell | 1.81e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.77e-42 | 114 |
neural tube | 8.87e-20 | 56 |
neural rod | 8.87e-20 | 56 |
future spinal cord | 8.87e-20 | 56 |
neural keel | 8.87e-20 | 56 |
regional part of nervous system | 8.05e-19 | 53 |
regional part of brain | 8.05e-19 | 53 |
brain | 2.68e-17 | 68 |
future brain | 2.68e-17 | 68 |
central nervous system | 3.69e-15 | 81 |
regional part of forebrain | 8.98e-15 | 41 |
forebrain | 8.98e-15 | 41 |
anterior neural tube | 8.98e-15 | 41 |
future forebrain | 8.98e-15 | 41 |
neural plate | 1.77e-14 | 82 |
presumptive neural plate | 1.77e-14 | 82 |
neurectoderm | 2.15e-14 | 86 |
nervous system | 1.87e-13 | 89 |
telencephalon | 9.48e-13 | 34 |
brain grey matter | 1.16e-12 | 34 |
gray matter | 1.16e-12 | 34 |
cerebral hemisphere | 4.46e-12 | 32 |
regional part of telencephalon | 7.23e-12 | 32 |
regional part of cerebral cortex | 1.22e-10 | 22 |
pre-chordal neural plate | 3.21e-10 | 61 |
neocortex | 9.42e-10 | 20 |
structure with developmental contribution from neural crest | 9.85e-10 | 132 |
cerebral cortex | 6.01e-09 | 25 |
pallium | 6.01e-09 | 25 |
ecto-epithelium | 7.84e-08 | 104 |
organ system subdivision | 9.24e-07 | 223 |