FFCP PHASE1:Hg19::chr1:21672024..21672041,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1889 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3146 | |||
|TSSclassifier=strong | |||
|UniProt=P42892,Q2Z2K8 | |||
|association_with_transcript=0bp_to_NM_001113348,uc001bem.2_5end | |||
|cluster_id=chr1:21672024..21672041,- | |||
|description=CAGE_peak_3_at_ECE1_5end | |||
|id=chr1:21672024..21672041,- | |||
|ontology_enrichment_celltype=CL:1000449!5.13e-09!16;CL:0000222!5.21e-09!119;CL:0002078!5.88e-09!44;CL:0002139!6.00e-09!24;CL:1000497!6.25e-09!18;CL:0002518!6.25e-09!18;CL:0000115!7.68e-09!35;CL:0000071!8.93e-09!18;CL:0002546!8.93e-09!18;CL:0000359!1.24e-08!32;CL:0000192!2.18e-08!42;CL:0000514!2.18e-08!42;CL:0000183!9.64e-08!59;CL:0002681!2.00e-07!13;CL:0002584!2.00e-07!13;CL:1000507!5.18e-07!12;CL:1000494!5.18e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.18e-09;24!CL:0000071;8.20e-09;18!CL:1000449;8.56e-09;15!CL:1000497;1.02e-08;17!CL:0002518;1.02e-08;17!CL:0000359;2.74e-08;32!CL:0000115;4.84e-08;36!CL:0002681;3.39e-07;12!CL:0002584;3.39e-07;12!CL:0000192;5.02e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.44e-09,121;CL:0002078,2.31e-09,45;CL:0000115,2.88e-09,36;CL:0002139,5.99e-09,24;CL:0000071,8.92e-09,18;CL:0002546,8.92e-09,18;CL:1000449,9.82e-09,15;CL:0000192,1.12e-08,43;CL:0000514,1.12e-08,43;CL:1000497,1.23e-08,17;CL:0002518,1.23e-08,17;CL:0000359,1.24e-08,32;CL:0002681,3.85e-07,12;CL:0002584,3.85e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;8.20e-09;18!CL:0000514;5.02e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.70e-28!118;UBERON:0000025!4.77e-26!194;UBERON:0004111!1.60e-25!241;UBERON:0000477!3.86e-25!286;UBERON:0004872!3.86e-22!84;UBERON:0000055!4.76e-22!69;UBERON:0001981!2.53e-21!60;UBERON:0007500!2.53e-21!60;UBERON:0004537!2.53e-21!60;UBERON:0006965!2.53e-21!60;UBERON:0002049!3.01e-21!79;UBERON:0007798!3.01e-21!79;UBERON:0000119!9.11e-21!312;UBERON:0000483!2.33e-20!309;UBERON:0001009!7.69e-18!113;UBERON:0004535!4.04e-17!110;UBERON:0001637!4.02e-16!42;UBERON:0003509!4.02e-16!42;UBERON:0004572!4.02e-16!42;UBERON:0000481!2.93e-15!347;UBERON:0000468!4.28e-15!659;UBERON:0000467!8.83e-14!625;UBERON:0000475!1.24e-13!365;UBERON:0000480!1.28e-13!626;UBERON:0004573!1.78e-12!33;UBERON:0004571!1.78e-12!33;UBERON:0002100!4.30e-12!216;UBERON:0003104!2.01e-10!238;UBERON:0009142!2.01e-10!238;UBERON:0000923!2.36e-10!604;UBERON:0005291!2.36e-10!604;UBERON:0006598!2.36e-10!604;UBERON:0002532!2.36e-10!604;UBERON:0000490!2.97e-10!138;UBERON:0005256!3.44e-10!143;UBERON:0002050!3.75e-10!605;UBERON:0005423!3.75e-10!605;UBERON:0000922!6.19e-10!612;UBERON:0004211!5.13e-09!16;UBERON:0001285!5.13e-09!16;UBERON:0007684!5.13e-09!16;UBERON:0003220!5.13e-09!16;UBERON:0004208!5.13e-09!16;UBERON:0005177!5.35e-09!107;UBERON:0003103!6.02e-09!69;UBERON:0009569!6.46e-09!113;UBERON:0001986!8.93e-09!18;UBERON:0004638!8.93e-09!18;UBERON:0004852!8.93e-09!18;UBERON:0000487!1.44e-08!22;UBERON:0000353!2.59e-08!17;UBERON:0000064!3.51e-08!219;UBERON:0006555!4.13e-08!17;UBERON:0005103!4.13e-08!17;UBERON:0000083!4.13e-08!17;UBERON:0009201!4.13e-08!17;UBERON:0004819!4.13e-08!17;UBERON:0006553!4.13e-08!17;UBERON:0003074!4.13e-08!17;UBERON:0003060!4.13e-08!17;UBERON:0000062!1.25e-07!511;UBERON:0005172!1.29e-07!55;UBERON:0005173!1.29e-07!55;UBERON:0000466!1.39e-07!126;UBERON:0001851!1.90e-07!16;UBERON:0001225!2.00e-07!13;UBERON:0008987!2.00e-07!13;UBERON:0002417!2.52e-07!61;UBERON:0000916!2.52e-07!61;UBERON:0004876!2.59e-07!20;UBERON:0000080!2.94e-07!18;UBERON:0002120!2.94e-07!18;UBERON:0004875!2.94e-07!18;UBERON:0005721!2.94e-07!18;UBERON:0005754!2.94e-07!18;UBERON:0007297!2.94e-07!18;UBERON:0000947!3.09e-07!21;UBERON:0010191!3.09e-07!21;UBERON:0003887!3.91e-07!21;UBERON:0000926!3.92e-07!448;UBERON:0004120!3.92e-07!448;UBERON:0006603!3.92e-07!448;UBERON:0003886!4.34e-07!63;UBERON:0003064!4.95e-07!37;UBERON:0009773!5.18e-07!12;UBERON:0001231!5.18e-07!12;UBERON:0004810!5.18e-07!12;UBERON:0007023!8.11e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.66e-13;42!UBERON:0003509;2.66e-13;42!UBERON:0004572;2.66e-13;42!UBERON:0003914;4.04e-12;74!UBERON:0004573;1.14e-11;33!UBERON:0004571;1.14e-11;33!UBERON:0007500;3.84e-11;56!UBERON:0001981;3.84e-11;56!UBERON:0004537;3.84e-11;56!UBERON:0000055;1.44e-10;65!UBERON:0004638;8.20e-09;18!UBERON:0001986;8.20e-09;18!UBERON:0004852;8.20e-09;18!UBERON:0006555;8.56e-09;15!UBERON:0004819;8.56e-09;15!UBERON:0001285;8.56e-09;15!UBERON:0007684;8.56e-09;15!UBERON:0000487;1.41e-08;22!UBERON:0000025;5.21e-08;93!UBERON:0002049;7.96e-08;75!UBERON:0007798;7.96e-08;75!UBERON:0000353;1.19e-07;15!UBERON:0000947;2.68e-07;21!UBERON:0010191;2.68e-07;21!UBERON:0001851;3.11e-07;15!UBERON:0001225;3.39e-07;12!UBERON:0008987;3.39e-07;12 | |||
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| |||
|short_description=p3@ECE1 | |||
}} |
Latest revision as of 03:41, 25 September 2015
Short description: | p3@ECE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ECE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001113348, uc001bem.2_5end |
EntrezGene: | ECE1 |
HGNC: | 3146 |
UniProt: | P42892Q2Z2K8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.44e-09 | 121 |
meso-epithelial cell | 2.31e-09 | 45 |
endothelial cell | 2.88e-09 | 36 |
endothelial cell of vascular tree | 5.99e-09 | 24 |
blood vessel endothelial cell | 8.92e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.92e-09 | 18 |
epithelial cell of nephron | 9.82e-09 | 15 |
smooth muscle cell | 1.12e-08 | 43 |
smooth muscle myoblast | 1.12e-08 | 43 |
kidney cell | 1.23e-08 | 17 |
kidney epithelial cell | 1.23e-08 | 17 |
vascular associated smooth muscle cell | 1.24e-08 | 32 |
kidney cortical cell | 3.85e-07 | 12 |
renal cortical epithelial cell | 3.85e-07 | 12 |