FFCP PHASE1:Hg19::chr9:116356572..116356583,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:116356572..116356583,+
|short_description=p19@RGS3
|description=CAGE_peak_19_at_RGS3_5end
|association_with_transcript=148bp_to_ENST00000497435_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=148bp_to_ENST00000497435_5end | |||
|cluster_id=chr9:116356572..116356583,+ | |||
|description=CAGE_peak_19_at_RGS3_5end | |||
|id=chr9:116356572..116356583,+ | |||
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|ontology_enrichment_celltype_v019=CL:0000359;5.01e-24;32!CL:0002139;4.04e-17;24!CL:0000115;2.81e-16;36!CL:0000071;1.09e-15;18!CL:1000413;4.21e-15;9!CL:0002539;3.21e-14;10!CL:0000192;6.93e-14;43!CL:0002595;3.36e-13;5!CL:0000346;4.09e-13;3!CL:1000428;4.09e-13;3!CL:0002078;4.29e-09;45!CL:0002593;5.61e-09;2!CL:0002559;4.98e-08;5!CL:0000187;1.52e-07;55!CL:0002540;7.57e-07;6 | |||
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|ontology_enrichment_development_v019=CL:0002546;1.09e-15;18!CL:0000514;6.93e-14;43!CL:0000355;4.59e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!6.62e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p19@RGS3 | |||
}} | }} |
Latest revision as of 07:27, 20 September 2015
Short description: | p19@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 148bp_to_ENST00000497435_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.57e-24 | 32 |
mesodermal cell | 8.38e-22 | 121 |
endothelial cell | 8.55e-18 | 36 |
smooth muscle cell | 2.44e-17 | 43 |
smooth muscle myoblast | 2.44e-17 | 43 |
endothelial cell of vascular tree | 2.76e-17 | 24 |
blood vessel endothelial cell | 6.23e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.23e-16 | 18 |
endothelial cell of artery | 3.33e-15 | 9 |
muscle cell | 1.18e-14 | 55 |
aortic smooth muscle cell | 2.12e-14 | 10 |
muscle precursor cell | 1.05e-13 | 58 |
myoblast | 1.05e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-13 | 58 |
meso-epithelial cell | 1.33e-13 | 45 |
hair follicle dermal papilla cell | 3.49e-13 | 3 |
stem cell of epidermis | 3.49e-13 | 3 |
smooth muscle cell of the subclavian artery | 3.77e-13 | 5 |
electrically responsive cell | 7.59e-13 | 61 |
electrically active cell | 7.59e-13 | 61 |
embryonic cell | 4.78e-10 | 250 |
lining cell | 7.23e-10 | 58 |
barrier cell | 7.23e-10 | 58 |
smooth muscle cell of the internal thoracic artery | 6.85e-09 | 2 |
hair follicle cell | 4.54e-08 | 5 |
mesenchymal stem cell of the bone marrow | 8.62e-07 | 6 |