FFCP PHASE1:Hg19::chr22:23522997..23523035,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1014 | |||
|TSSclassifier=strong | |||
|UniProt=A9UF01,E9PGJ4,A9UF04 | |||
|association_with_transcript=-112bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end | |||
|cluster_id=chr22:23522997..23523035,+ | |||
|description=CAGE_peak_2_at_BCR_5end | |||
|id=chr22:23522997..23523035,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.59e-21!254;CL:0000076!1.86e-12!62;CL:0002139!7.30e-10!24;CL:0002076!3.41e-08!43;CL:0000223!3.88e-08!59;CL:0000071!3.95e-08!18;CL:0002546!3.95e-08!18;CL:0002078!2.04e-07!44;CL:0000115!2.79e-07!35;CL:0002321!5.02e-07!248;CL:0000220!9.11e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.06e-10;24!CL:0000071;3.11e-08;18!CL:0002076;4.72e-07;42!CL:0000115;8.06e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.12e-20,253;CL:0000076,6.29e-12,63;CL:0002139,2.25e-10,24;CL:0002076,8.54e-09,42;CL:0000223,1.04e-08,58;CL:0000071,1.55e-08,18;CL:0002546,1.55e-08,18;CL:0000115,2.74e-08,36;CL:0002078,3.51e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;3.11e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.51e-15!241;UBERON:0000477!1.61e-14!286;UBERON:0000025!8.44e-12!194;UBERON:0000483!3.50e-11!309;UBERON:0000119!1.24e-10!312;UBERON:0002780!4.30e-09!41;UBERON:0001890!4.30e-09!41;UBERON:0006240!4.30e-09!41;UBERON:0003080!5.96e-09!42;UBERON:0001869!8.48e-09!32;UBERON:0002020!1.87e-08!34;UBERON:0003528!1.87e-08!34;UBERON:0003056!2.13e-08!61;UBERON:0000064!3.41e-08!219;UBERON:0001986!3.95e-08!18;UBERON:0004638!3.95e-08!18;UBERON:0004852!3.95e-08!18;UBERON:0001893!7.91e-08!34;UBERON:0002791!9.15e-08!33;UBERON:0001049!1.03e-07!57;UBERON:0005068!1.03e-07!57;UBERON:0006241!1.03e-07!57;UBERON:0007135!1.03e-07!57;UBERON:0000487!1.13e-07!22;UBERON:0003075!1.33e-07!86;UBERON:0007284!1.33e-07!86;UBERON:0006914!2.21e-07!25;UBERON:0004121!2.22e-07!169;UBERON:0002616!2.76e-07!59;UBERON:0000153!5.40e-07!129;UBERON:0007811!5.40e-07!129;UBERON:0000924!8.31e-07!173;UBERON:0006601!8.31e-07!173;UBERON:0002346!9.55e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.78e-09;32!UBERON:0002791;2.29e-08;32!UBERON:0004638;3.11e-08;18!UBERON:0001986;3.11e-08;18!UBERON:0004852;3.11e-08;18!UBERON:0003528;4.23e-08;34!UBERON:0002020;4.23e-08;34!UBERON:0000490;2.02e-07;33!UBERON:0002780;2.13e-07;41!UBERON:0001890;2.13e-07;41!UBERON:0001893;2.33e-07;34!UBERON:0000487;3.17e-07;22!UBERON:0006914;6.85e-07;25!UBERON:0002619;7.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.05e-14,240;UBERON:0000025,6.44e-11,192;UBERON:0000483,2.66e-09,306;UBERON:0002780,2.95e-09,41;UBERON:0001890,2.95e-09,41;UBERON:0003080,2.95e-09,41;UBERON:0006240,2.95e-09,41;UBERON:0001869,3.03e-09,32;UBERON:0000119,1.10e-08,309;UBERON:0003528,1.28e-08,34;UBERON:0002020,1.28e-08,34;UBERON:0010371,1.44e-08,104;UBERON:0004638,1.55e-08,18;UBERON:0001986,1.55e-08,18;UBERON:0004852,1.55e-08,18;UBERON:0002791,1.71e-08,32;UBERON:0003056,3.11e-08,61;UBERON:0001893,6.46e-08,34;UBERON:0000487,9.38e-08,22;UBERON:0001049,1.02e-07,56;UBERON:0005068,1.02e-07,56;UBERON:0006241,1.02e-07,56;UBERON:0007135,1.02e-07,56;UBERON:0000073,1.14e-07,53;UBERON:0002616,1.14e-07,53;UBERON:0006914,1.91e-07,25;UBERON:0003075,2.91e-07,82;UBERON:0007284,2.91e-07,82;UBERON:0002619,6.04e-07,22 | |||
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| |||
|short_description=p2@BCR | |||
}} |
Latest revision as of 08:46, 19 September 2015
Short description: | p2@BCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCR_5end |
Coexpression cluster: | NA |
Association with transcript: | -112bp_to_ENST00000290956, ENST00000292697, ENST00000420248_5end |
EntrezGene: | BCR |
HGNC: | 1014 |
UniProt: | A9UF01E9PGJ4A9UF04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.12e-20 | 253 |
squamous epithelial cell | 6.29e-12 | 63 |
endothelial cell of vascular tree | 2.25e-10 | 24 |
endo-epithelial cell | 8.54e-09 | 42 |
endodermal cell | 1.04e-08 | 58 |
blood vessel endothelial cell | 1.55e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.55e-08 | 18 |
endothelial cell | 2.74e-08 | 36 |
meso-epithelial cell | 3.51e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 4.05e-14 | 240 |
tube | 6.44e-11 | 192 |
epithelium | 2.66e-09 | 306 |
regional part of forebrain | 2.95e-09 | 41 |
forebrain | 2.95e-09 | 41 |
anterior neural tube | 2.95e-09 | 41 |
future forebrain | 2.95e-09 | 41 |
cerebral hemisphere | 3.03e-09 | 32 |
cell layer | 1.10e-08 | 309 |
brain grey matter | 1.28e-08 | 34 |
gray matter | 1.28e-08 | 34 |
ecto-epithelium | 1.44e-08 | 104 |
blood vessel endothelium | 1.55e-08 | 18 |
endothelium | 1.55e-08 | 18 |
cardiovascular system endothelium | 1.55e-08 | 18 |
regional part of telencephalon | 1.71e-08 | 32 |
pre-chordal neural plate | 3.11e-08 | 61 |
telencephalon | 6.46e-08 | 34 |
simple squamous epithelium | 9.38e-08 | 22 |
neural tube | 1.02e-07 | 56 |
neural rod | 1.02e-07 | 56 |
future spinal cord | 1.02e-07 | 56 |
neural keel | 1.02e-07 | 56 |
regional part of nervous system | 1.14e-07 | 53 |
regional part of brain | 1.14e-07 | 53 |
squamous epithelium | 1.91e-07 | 25 |
neural plate | 2.91e-07 | 82 |
presumptive neural plate | 2.91e-07 | 82 |
regional part of cerebral cortex | 6.04e-07 | 22 |