FFCP PHASE1:Hg19::chr22:50908611..50908652,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:50908611..50908652,+ | |||
|coexpression_cluster_id=C868 | |||
|description=CAGE_peak_at_chr22:50908611..50908652,+ | |||
|id=chr22:50908611..50908652,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.10e-49!52;CL:0000542!3.68e-48!53;CL:0000051!3.68e-48!53;CL:0000738!1.94e-32!140;CL:0000037!1.03e-27!172;CL:0000566!1.03e-27!172;CL:0002087!3.69e-27!119;CL:0000791!5.29e-26!18;CL:0000789!5.29e-26!18;CL:0002420!5.29e-26!18;CL:0002419!5.29e-26!18;CL:0000790!5.29e-26!18;CL:0000988!1.24e-25!182;CL:0002031!2.86e-22!124;CL:0000624!3.74e-21!6;CL:0000084!4.29e-21!25;CL:0000827!4.29e-21!25;CL:0000945!5.61e-21!24;CL:0000826!5.61e-21!24;CL:0002032!7.70e-20!165;CL:0000837!7.70e-20!165;CL:0000784!2.12e-12!3;CL:0000623!6.32e-12!3;CL:0000825!6.32e-12!3;CL:0000842!1.16e-11!3;CL:0000898!2.53e-11!3;CL:0000625!4.14e-11!11;CL:0000134!1.95e-09!358;CL:0002320!4.63e-09!365;CL:0000224!7.64e-09!4;CL:0000451!2.40e-08!10;CL:0000815!7.14e-08!2;CL:0000792!7.14e-08!2;CL:0002677!7.14e-08!2;CL:0000219!9.63e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.23e-50;3!CL:0000451;1.42e-24;10!CL:0000895;8.01e-18;1!CL:0000791;5.48e-15;18!CL:0000789;5.48e-15;18!CL:0002419;5.48e-15;18!CL:0000840;3.96e-12;5!CL:0000624;5.67e-12;6!CL:0000084;6.93e-11;25!CL:0001014;1.38e-09;2!CL:0001016;1.38e-09;2!CL:0000990;2.16e-08;8!CL:0000542;8.00e-08;53!CL:0000625;6.16e-07;11!CL:0000226;8.38e-07;3!CL:0000898;8.38e-07;3!CL:0000623;8.38e-07;3!CL:0000842;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.85e-51,3;CL:0000451,1.05e-24,10;CL:0000810,1.22e-17,1;CL:0000895,1.22e-17,1;CL:0002436,1.22e-17,1;CL:0002427,1.22e-17,1;CL:0002428,1.22e-17,1;CL:0002429,1.22e-17,1;CL:0002433,1.22e-17,1;CL:0002431,1.22e-17,1;CL:0002432,1.22e-17,1;CL:0000791,6.35e-15,18;CL:0000789,6.35e-15,18;CL:0002420,6.35e-15,18;CL:0002419,6.35e-15,18;CL:0000790,6.35e-15,18;CL:0000738,9.57e-14,136;CL:0000840,3.64e-12,5;CL:0001029,3.64e-12,5;CL:0000624,5.68e-12,6;CL:0000838,3.71e-11,52;CL:0000037,5.68e-11,168;CL:0000542,6.08e-11,53;CL:0000051,6.08e-11,53;CL:0000084,7.69e-11,25;CL:0000827,7.69e-11,25;CL:0000988,2.27e-10,177;CL:0001014,1.22e-09,2;CL:0001016,1.22e-09,2;CL:0000893,1.71e-09,2;CL:0002489,1.71e-09,2;CL:0000809,1.71e-09,2;CL:0000808,1.71e-09,2;CL:0000894,1.71e-09,2;CL:0000806,1.71e-09,2;CL:0000807,1.71e-09,2;CL:0000805,1.71e-09,2;CL:0002425,1.71e-09,2;CL:0002087,1.64e-08,115;CL:0000990,2.05e-08,8;CL:0002031,3.87e-08,120;CL:0000625,6.94e-07,11;CL:0000226,8.15e-07,3;CL:0000842,8.15e-07,3;CL:0000623,9.12e-07,3;CL:0000825,9.12e-07,3;CL:0000898,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002427;8.01e-18;1!CL:0000790;5.48e-15;18!CL:0002425;1.38e-09;2!CL:0000051;8.00e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.47e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.01e-18;1!DOID:0070004;8.01e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.70e-17,1;DOID:0070004,1.70e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!7.85e-09!4;UBERON:0005058!7.85e-09!4;UBERON:0009113!7.85e-09!4;UBERON:0003295!7.85e-09!4;UBERON:0005562!7.85e-09!4;UBERON:0002384!1.50e-08!375;UBERON:0009722!9.74e-08!11;UBERON:0007690!9.74e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.38e-09;2!UBERON:0005058;1.38e-09;2!UBERON:0009113;1.38e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.57e-17,4;UBERON:0005058,1.57e-17,4;UBERON:0009113,1.57e-17,4;UBERON:0003295,1.57e-17,4;UBERON:0005562,1.57e-17,4;UBERON:0003351,5.08e-12,6;UBERON:0004177,1.94e-10,7;UBERON:0005057,1.94e-10,7;UBERON:0000974,1.42e-07,10;UBERON:0003408,1.42e-07,10;UBERON:0001042,1.42e-07,10;UBERON:0009145,1.42e-07,10;UBERON:0006562,5.81e-07,11;UBERON:0009722,5.81e-07,11;UBERON:0007690,5.81e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0.786728553697808,0.383829398097213,0,0,0,0,0.46480320348181,0.142169232487422,0.293600439334847,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,0.393010762749165,1.64481199199607,0,0.32592226663359,0,0,0,0.294605907474837,0,0.541607727530031,0.512365278902701,0.130059347559878,0,0,0,0,0,0,0,1.14966148080576,0.34362744548263,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0.80642697289893,1.06976078313403,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10037811596945,2.28797964312051,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.862510299438069,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,1.98639085746745,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr22:50908611..50908652,+ | |||
}} |
Latest revision as of 22:29, 28 July 2015
Short description: | p@chr22:50908611..50908652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50908611..50908652, + |
Coexpression cluster: | C868_Dendritic_Natural_CD8_CD4_Basophils_Eosinophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.57e-17 | 4 |
hemolymphoid system gland | 1.57e-17 | 4 |
thymic region | 1.57e-17 | 4 |
pharyngeal gland | 1.57e-17 | 4 |
thymus primordium | 1.57e-17 | 4 |
pharyngeal epithelium | 5.08e-12 | 6 |
hemopoietic organ | 1.94e-10 | 7 |
immune organ | 1.94e-10 | 7 |
neck | 1.42e-07 | 10 |
gland of gut | 1.42e-07 | 10 |
chordate pharynx | 1.42e-07 | 10 |
pharyngeal region of foregut | 1.42e-07 | 10 |
pharynx | 5.81e-07 | 11 |
entire pharyngeal arch endoderm | 5.81e-07 | 11 |
early pharyngeal endoderm | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.70e-17 | 1 |
myeloma | 1.70e-17 | 1 |