FFCP PHASE1:Mm9::chr10:57834157..57834247,+: Difference between revisions
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{{FFCP|EntrezGene=110829|HGNC=|MCL_coexpression_id=33|UniProt=E9Q4A6,A8CVP1|association_with_transcript=0bp_to_ENSMUST00000171062,NM_201242,uc011xec.1_5end|description=CAGE_peak_4_at_Lims1_5end|id=chr10:57834157..57834247,+|ontology_enrichment_celltype=CL:0000988!2.90e-09!32;CL:0002032!2.90e-09!32;CL:0000037!2.90e-09!32;CL:0000566!2.90e-09!32;CL:0000837!2.90e-09!32;CL:0000084!5.40e-08!11;CL:0000827!5.40e-08!11;CL:0002031!9.26e-08!25;CL:0000838!1.24e-07!12;CL:0000542!2.05e-07!13;CL:0000051!2.05e-07!13;CL:0000791!8.55e-07!9;CL:0000789!8.55e-07!9;CL:0002420!8.55e-07!9;CL:0002419!8.55e-07!9;CL:0000790!8.55e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.09e-10,32;CL:0002032,1.09e-10,32;CL:0000037,1.09e-10,32;CL:0000837,1.09e-10,32;CL:0002031,4.74e-09,25;CL:0000084,1.31e-08,11;CL:0000827,1.31e-08,11;CL:0000838,3.26e-08,12;CL:0000542,5.66e-08,13;CL:0000051,5.66e-08,13;CL:0000791,2.69e-07,9;CL:0000789,2.69e-07,9;CL:0002420,2.69e-07,9;CL:0002419,2.69e-07,9;CL:0000790,2.69e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000077!5.49e-17!97;UBERON:0001041!1.22e-15!92;UBERON:0001004!2.01e-12!42;UBERON:0000065!3.82e-12!41;UBERON:0004177!1.23e-11!29;UBERON:0003104!1.25e-11!131;UBERON:0009142!1.25e-11!131;UBERON:0000926!4.13e-11!193;UBERON:0004120!4.13e-11!193;UBERON:0006603!4.13e-11!193;UBERON:0004119!6.46e-11!130;UBERON:0000925!6.46e-11!130;UBERON:0006595!6.46e-11!130;UBERON:0004921!8.93e-11!126;UBERON:0004185!8.93e-11!126;UBERON:0001007!1.28e-10!128;UBERON:0001555!1.28e-10!128;UBERON:0007026!1.28e-10!128;UBERON:0005057!8.90e-10!51;UBERON:0002193!1.91e-09!48;UBERON:0002390!2.33e-09!45;UBERON:0003061!2.33e-09!45;UBERON:0002405!4.05e-09!70;UBERON:0000072!4.21e-09!27;UBERON:0003408!4.30e-09!24;UBERON:0002370!7.70e-09!23;UBERON:0000974!7.70e-09!23;UBERON:0004807!7.70e-09!23;UBERON:0005058!7.70e-09!23;UBERON:0003351!7.70e-09!23;UBERON:0009113!7.70e-09!23;UBERON:0003295!7.70e-09!23;UBERON:0009722!7.70e-09!23;UBERON:0005562!7.70e-09!23;UBERON:0007690!7.70e-09!23;UBERON:0006562!2.04e-08!24;UBERON:0001557!2.04e-08!24;UBERON:0001042!2.04e-08!24;UBERON:0008814!2.04e-08!24;UBERON:0009145!2.04e-08!24;UBERON:0001048!4.63e-08!147;UBERON:0003081!2.85e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001041,3.55e-17,80;UBERON:0000077,7.90e-15,35;UBERON:0001004,8.37e-14,42;UBERON:0000065,1.69e-13,41;UBERON:0004177,2.04e-13,29;UBERON:0005057,2.04e-13,29;UBERON:0002390,2.41e-11,45;UBERON:0003061,2.41e-11,45;UBERON:0002193,4.31e-11,48;UBERON:0002405,4.31e-11,48;UBERON:0003408,1.36e-10,24;UBERON:0002370,2.56e-10,23;UBERON:0000974,2.56e-10,23;UBERON:0004807,2.56e-10,23;UBERON:0005058,2.56e-10,23;UBERON:0003351,2.56e-10,23;UBERON:0009113,2.56e-10,23;UBERON:0003295,2.56e-10,23;UBERON:0009722,2.56e-10,23;UBERON:0005562,2.56e-10,23;UBERON:0007690,2.56e-10,23;UBERON:0000072,3.55e-10,27;UBERON:0004921,3.73e-10,114;UBERON:0004119,4.55e-10,118;UBERON:0000925,4.55e-10,118;UBERON:0006595,4.55e-10,118;UBERON:0001007,9.04e-10,116;UBERON:0001555,9.04e-10,116;UBERON:0007026,9.04e-10,116;UBERON:0006562,1.98e-09,24;UBERON:0001557,1.98e-09,24;UBERON:0001042,1.98e-09,24;UBERON:0008814,1.98e-09,24;UBERON:0009145,1.98e-09,24;UBERON:0005911,3.48e-08,69;UBERON:0003081,2.07e-07,87|phase1_expression=0.160148847104794,0,0,0,0,1.17515490338323,0.700837921786577,14.8491821957813,25.764336153755,26.9174205270293,21.2310280599626,12.6837732802585,72.4179087609,68.450175094075,9.32707333083856,10.9336644390506,9.09430441566591,8.20201629931418,11.9289557236993,3.39511721438424,2.89147186513637,25.8156473122302,24.291580389921,1.11994695955385,0.91763712426868,0.57423196411502,0,0,0.380046838912748,0.756090389279792,0.443461021310609,15.2407361630311,14.7615549020297,31.6963362030877,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0,0,1.51004345451963,23.211588544363,29.9123481236793,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0,5.79728977403356,0.860423876981386,0,0,0,0,2.66844398250329,0,0,0,0.845060518660083,0,0,0,3.89683873820185,3.04031838570118,4.54972000513305,2.51204535381932,22.5275958773039,1.03909497345377,1.56136794089522,1.52232739156071,2.53677046981664,0.301445281105245,1.05829836422134,0,1.97755974187499,1.87979163995885,7.96149496754887,1.45590164952668,3.97514733228708,6.30337829075789,0,2.04946557908083,1.25668024088073,2.81002760729451,10.4239158320151,8.39863823390771,11.5633906636489,0.299581278809645,0.915001205637253,0,0.695297280769106,0,0.20778804455956,0.324482526135515,0.407357455401265,6.34475550111474,3.0326731012041,5.05060454127538,1.43132487258974,0.919608417733892,0.360124259610698,0.90422890701429,0.136072998302656,0,0.281105173679186,2.06962696591213,0.862271971731369,0.945530400839096,1.23165786914764,0.43839146485515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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110829 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q4A6,A8CVP1 | |||
|association_with_transcript=0bp_to_ENSMUST00000171062,NM_201242,uc011xec.1_5end | |||
|cluster_id=chr10:57834157..57834247,+ | |||
|description=CAGE_peak_4_at_Lims1_5end | |||
|id=chr10:57834157..57834247,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.90e-09!32;CL:0002032!2.90e-09!32;CL:0000037!2.90e-09!32;CL:0000566!2.90e-09!32;CL:0000837!2.90e-09!32;CL:0000084!5.40e-08!11;CL:0000827!5.40e-08!11;CL:0002031!9.26e-08!25;CL:0000838!1.24e-07!12;CL:0000542!2.05e-07!13;CL:0000051!2.05e-07!13;CL:0000791!8.55e-07!9;CL:0000789!8.55e-07!9;CL:0002420!8.55e-07!9;CL:0002419!8.55e-07!9;CL:0000790!8.55e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.09e-10,32;CL:0002032,1.09e-10,32;CL:0000037,1.09e-10,32;CL:0000837,1.09e-10,32;CL:0002031,4.74e-09,25;CL:0000084,1.31e-08,11;CL:0000827,1.31e-08,11;CL:0000838,3.26e-08,12;CL:0000542,5.66e-08,13;CL:0000051,5.66e-08,13;CL:0000791,2.69e-07,9;CL:0000789,2.69e-07,9;CL:0002420,2.69e-07,9;CL:0002419,2.69e-07,9;CL:0000790,2.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000077!5.49e-17!97;UBERON:0001041!1.22e-15!92;UBERON:0001004!2.01e-12!42;UBERON:0000065!3.82e-12!41;UBERON:0004177!1.23e-11!29;UBERON:0003104!1.25e-11!131;UBERON:0009142!1.25e-11!131;UBERON:0000926!4.13e-11!193;UBERON:0004120!4.13e-11!193;UBERON:0006603!4.13e-11!193;UBERON:0004119!6.46e-11!130;UBERON:0000925!6.46e-11!130;UBERON:0006595!6.46e-11!130;UBERON:0004921!8.93e-11!126;UBERON:0004185!8.93e-11!126;UBERON:0001007!1.28e-10!128;UBERON:0001555!1.28e-10!128;UBERON:0007026!1.28e-10!128;UBERON:0005057!8.90e-10!51;UBERON:0002193!1.91e-09!48;UBERON:0002390!2.33e-09!45;UBERON:0003061!2.33e-09!45;UBERON:0002405!4.05e-09!70;UBERON:0000072!4.21e-09!27;UBERON:0003408!4.30e-09!24;UBERON:0002370!7.70e-09!23;UBERON:0000974!7.70e-09!23;UBERON:0004807!7.70e-09!23;UBERON:0005058!7.70e-09!23;UBERON:0003351!7.70e-09!23;UBERON:0009113!7.70e-09!23;UBERON:0003295!7.70e-09!23;UBERON:0009722!7.70e-09!23;UBERON:0005562!7.70e-09!23;UBERON:0007690!7.70e-09!23;UBERON:0006562!2.04e-08!24;UBERON:0001557!2.04e-08!24;UBERON:0001042!2.04e-08!24;UBERON:0008814!2.04e-08!24;UBERON:0009145!2.04e-08!24;UBERON:0001048!4.63e-08!147;UBERON:0003081!2.85e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,3.55e-17,80;UBERON:0000077,7.90e-15,35;UBERON:0001004,8.37e-14,42;UBERON:0000065,1.69e-13,41;UBERON:0004177,2.04e-13,29;UBERON:0005057,2.04e-13,29;UBERON:0002390,2.41e-11,45;UBERON:0003061,2.41e-11,45;UBERON:0002193,4.31e-11,48;UBERON:0002405,4.31e-11,48;UBERON:0003408,1.36e-10,24;UBERON:0002370,2.56e-10,23;UBERON:0000974,2.56e-10,23;UBERON:0004807,2.56e-10,23;UBERON:0005058,2.56e-10,23;UBERON:0003351,2.56e-10,23;UBERON:0009113,2.56e-10,23;UBERON:0003295,2.56e-10,23;UBERON:0009722,2.56e-10,23;UBERON:0005562,2.56e-10,23;UBERON:0007690,2.56e-10,23;UBERON:0000072,3.55e-10,27;UBERON:0004921,3.73e-10,114;UBERON:0004119,4.55e-10,118;UBERON:0000925,4.55e-10,118;UBERON:0006595,4.55e-10,118;UBERON:0001007,9.04e-10,116;UBERON:0001555,9.04e-10,116;UBERON:0007026,9.04e-10,116;UBERON:0006562,1.98e-09,24;UBERON:0001557,1.98e-09,24;UBERON:0001042,1.98e-09,24;UBERON:0008814,1.98e-09,24;UBERON:0009145,1.98e-09,24;UBERON:0005911,3.48e-08,69;UBERON:0003081,2.07e-07,87 | |||
|phase1_expression=0.160148847104794,0,0,0,0,1.17515490338323,0.700837921786577,14.8491821957813,25.764336153755,26.9174205270293,21.2310280599626,12.6837732802585,72.4179087609,68.450175094075,9.32707333083856,10.9336644390506,9.09430441566591,8.20201629931418,11.9289557236993,3.39511721438424,2.89147186513637,25.8156473122302,24.291580389921,1.11994695955385,0.91763712426868,0.57423196411502,0,0,0.380046838912748,0.756090389279792,0.443461021310609,15.2407361630311,14.7615549020297,31.6963362030877,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0,0,1.51004345451963,23.211588544363,29.9123481236793,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0,5.79728977403356,0.860423876981386,0,0,0,0,2.66844398250329,0,0,0,0.845060518660083,0,0,0,3.89683873820185,3.04031838570118,4.54972000513305,2.51204535381932,22.5275958773039,1.03909497345377,1.56136794089522,1.52232739156071,2.53677046981664,0.301445281105245,1.05829836422134,0,1.97755974187499,1.87979163995885,7.96149496754887,1.45590164952668,3.97514733228708,6.30337829075789,0,2.04946557908083,1.25668024088073,2.81002760729451,10.4239158320151,8.39863823390771,11.5633906636489,0.299581278809645,0.915001205637253,0,0.695297280769106,0,0.20778804455956,0.324482526135515,0.407357455401265,6.34475550111474,3.0326731012041,5.05060454127538,1.43132487258974,0.919608417733892,0.360124259610698,0.90422890701429,0.136072998302656,0,0.281105173679186,2.06962696591213,0.862271971731369,0.945530400839096,1.23165786914764,0.43839146485515,0.556094498451196,0,0,1.39323986772945,2.80885274925294,2.31613116403244,2.84163499395593,3.10688658803253,7.73935997937617,4.14142741360334,2.60419209143731,3.14822770795846,1.23413690309903,1.39520366850245,1.07309360559848,0.817357396570186,0.987359099480883,1.64167464079095,1.37816976227955,1.16959989940266,0.878200461164203,1.47627060636409,0.210289948564127,0,1.98251269790279,0.793351699990633,1.70630600428187,1.85789337488351,1.9330119198314,0.201683524623343,0.667134131534611,1.33157938278791,0.949058123089023,0.988193728344065,3.2673577144035,1.59165177632921,1.55971269695296,2.69645822596266,0.864552199498777,0.995706366271836,0.569003702859245,1.14248512609729,0,1.4255592949172,0.969762435838129,0.841629838683823,1.58091342810643,1.03327103585722,0.941992367048249,0.987177311374404,0.296452627087149,24.3593854345497,22.6042844380183,28.7823503852613,30.4290182082754,31.3530307678142,19.6061905871693,12.3709339103849,6.97181475132652,3.84385978463314,1.43768206527355,2.60498663367952,0,0.252578877947112,0.538192240565737,0.964887042726734,10.9004382198297,1.32643988239339,1.30371981153621,1.01847051465113,1.17345124144251,5.86271901046355,9.99783291721258,5.65887578787617,8.6699329258405,12.1805579306826,9.24837658213425,8.68475567993411,12.7786886580763,9.83613598354279,0,1.08781136763742,0.491764273019036,1.10374698521893,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0.566153061577665,0,0.584511715822624,0.395287777946524,0.642642632843614,3.40656204499845,0.534196811001766,1.79175655288934,7.75359577970917,0,2.18502572539483,1.51161778482376,1.32023555829129,0.295301892880773,1.22974059177571,3.10113951801865,4.36240475373007,4.27796854061666,2.84433082142234,2.10837217149998,1.03135543248187,0,1.26042765821917,0.776152102696527,1.07168517515796,0.709360934569094,0.178368817602071,0.822745103010605,0,3.05073220482823,1.69465656691056,1.98475558249466,0.49465875882444,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0.874442509889552,0.741701208042039,16.0618627949982,7.01715351074956,15.7415348264255,16.1996873024034,19.5472745641066,11.4389086603261,17.677756719361,19.4532518729885,16.5839968565309,3.81868247206045,0.949007980743406,2.64315307264903,2.37611749807963,4.39085421630384,4.36725127492355,5.12484516262319,3.14083131756277,11.5172614472973,1.03691978633434,4.34937519160848,0,0.598066184175915,1.32366792365678,0.388902376688095,0.645799117388655,1.01373675294467,1.17357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0,48.6657125767395,3.04087822935246,7.39518891586756,9.22437843142345,10.7416017400489,19.6694541233452,22.2361581611942,23.3349452935832,25.2416124870369,26.0627278760099,35.0875124276205,44.5382514980669,44.6422945211129,63.3472809824104,0.906921534460845,0.665957860122194,1.97370484540847,0.167884616364078,21.8304241256375,2.62755465631655,9.34073283763052,9.00347192132076,3.00943262421218,0,0,0,0.515559547031063,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.93408612825759,5.1873233542134,3.92687293234509,4.86213434136588,7.1268475293514,1.10306105070008,1.77797382241292,2.88449080134452,1.28367683836726,2.02157769411038,1.52087579934144,2.26351609663291,2.43467919421694,1.664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| |||
|short_description=p4@Lims1 | |||
}} |
Latest revision as of 02:40, 26 September 2015
Short description: | p4@Lims1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lims1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000171062, NM_201242, uc011xec.1_5end |
EntrezGene: | Lims1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.09e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.09e-10 | 32 |
hematopoietic stem cell | 1.09e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.09e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 4.74e-09 | 25 |
T cell | 1.31e-08 | 11 |
pro-T cell | 1.31e-08 | 11 |
lymphoid lineage restricted progenitor cell | 3.26e-08 | 12 |
lymphocyte | 5.66e-08 | 13 |
common lymphoid progenitor | 5.66e-08 | 13 |
mature alpha-beta T cell | 2.69e-07 | 9 |
alpha-beta T cell | 2.69e-07 | 9 |
immature T cell | 2.69e-07 | 9 |
mature T cell | 2.69e-07 | 9 |
immature alpha-beta T cell | 2.69e-07 | 9 |