FFCP PHASE1:Hg19::chr2:220119445..220119471,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7277 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12407 | |||
|TSSclassifier=strong | |||
|UniProt=A8MUB1 | |||
|association_with_transcript=-115bp_to_ENST00000392088,uc010zkz.1_5end | |||
|cluster_id=chr2:220119445..220119471,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_6_at_TUBA4A_5end | |||
|id=chr2:220119445..220119471,- | |||
|ontology_enrichment_celltype=CL:0000738!6.88e-54!140;CL:0002087!3.06e-48!119;CL:0000766!1.87e-46!76;CL:0002057!1.34e-45!42;CL:0002031!5.91e-42!124;CL:0000860!1.16e-41!45;CL:0000988!1.23e-40!182;CL:0000037!1.63e-40!172;CL:0000566!1.63e-40!172;CL:0002032!5.44e-39!165;CL:0000837!5.44e-39!165;CL:0002194!5.48e-38!63;CL:0000576!5.48e-38!63;CL:0000040!5.48e-38!63;CL:0000559!5.48e-38!63;CL:0002009!2.26e-36!65;CL:0000839!1.78e-34!70;CL:0000557!8.78e-34!71;CL:0000763!2.25e-28!112;CL:0000049!2.25e-28!112;CL:0000094!3.44e-13!8;CL:0000081!2.54e-11!11;CL:0000624!2.30e-10!6;CL:0000838!6.35e-10!52;CL:0002393!8.72e-10!9;CL:0002397!8.72e-10!9;CL:0000542!1.29e-09!53;CL:0000051!1.29e-09!53;CL:0000134!2.22e-09!358;CL:0000080!6.28e-09!6;CL:0002320!8.38e-09!365;CL:0000791!1.07e-07!18;CL:0000789!1.07e-07!18;CL:0002420!1.07e-07!18;CL:0002419!1.07e-07!18;CL:0000790!1.07e-07!18;CL:0000219!3.55e-07!390;CL:0000084!7.32e-07!25;CL:0000827!7.32e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.41e-44;33!CL:0002057;5.41e-44;33!CL:0000473;1.02e-32;39!CL:0000234;1.02e-32;39!CL:0000576;1.01e-26;48!CL:0000766;6.15e-19;69!CL:0000624;3.53e-16;6!CL:0002087;2.85e-15;104!CL:0000623;3.73e-13;3!CL:0000791;5.42e-13;18!CL:0000789;5.42e-13;18!CL:0002419;5.42e-13;18!CL:0000094;2.35e-12;8!CL:0000738;3.12e-10;136!CL:0000763;8.35e-10;100!CL:0000771;3.24e-09;2!CL:0000084;5.83e-09;25!CL:0000081;6.91e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-48,42;CL:0002057,1.71e-48,42;CL:0000473,2.44e-45,48;CL:0000234,2.44e-45,48;CL:0000738,2.60e-44,136;CL:0000766,1.52e-41,72;CL:0002087,1.18e-40,115;CL:0002194,5.87e-35,59;CL:0000576,5.87e-35,59;CL:0000040,5.87e-35,59;CL:0000559,5.87e-35,59;CL:0002031,3.91e-34,120;CL:0000037,4.77e-34,168;CL:0002009,1.28e-33,61;CL:0002032,4.04e-32,161;CL:0000837,4.04e-32,161;CL:0000988,7.96e-32,177;CL:0000839,1.27e-30,66;CL:0000557,4.46e-30,67;CL:0000763,2.74e-25,108;CL:0000049,2.74e-25,108;CL:0000624,4.08e-16,6;CL:0000623,3.52e-13,3;CL:0000825,3.52e-13,3;CL:0000791,5.85e-13,18;CL:0000789,5.85e-13,18;CL:0002420,5.85e-13,18;CL:0002419,5.85e-13,18;CL:0000790,5.85e-13,18;CL:0000094,2.04e-12,8;CL:0000134,5.04e-11,354;CL:0002320,1.28e-10,361;CL:0000771,3.24e-09,2;CL:0000219,3.33e-09,386;CL:0000084,6.14e-09,25;CL:0000827,6.14e-09,25;CL:0000081,6.26e-09,11;CL:0000034,1.36e-07,441;CL:0000048,1.76e-07,427;CL:0000723,3.04e-07,433;CL:0000838,4.42e-07,52;CL:0000542,6.61e-07,53;CL:0000051,6.61e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-36;42!CL:0000790;5.42e-13;18!CL:0000049;3.53e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.35e-33!102;UBERON:0003061!1.35e-33!102;UBERON:0002193!5.26e-29!112;UBERON:0002371!2.47e-28!80;UBERON:0001474!2.38e-25!86;UBERON:0004765!1.63e-20!101;UBERON:0001434!1.63e-20!101;UBERON:0002405!2.39e-18!115;UBERON:0003081!1.49e-10!216;UBERON:0002204!5.11e-09!167;UBERON:0002384!5.01e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.70e-26,98;UBERON:0003061,3.70e-26,98;UBERON:0002371,8.39e-26,76;UBERON:0001474,1.80e-23,82;UBERON:0002193,4.40e-23,108;UBERON:0002405,7.24e-22,93;UBERON:0004765,7.63e-21,90;UBERON:0001434,3.76e-18,100;UBERON:0002384,4.52e-10,371;UBERON:0003081,4.76e-09,203;UBERON:0002204,1.71e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.393553906568396,3.54027849164014,8.06041736004147,0.928896739896456,0,0,0,0,0,0,1.66198622559563,3.00816671205213,3.90619567288533,0,0.32389366601898,0,1.01778767145695,0.755751887377619,0.727752183563449,3.0215774797739,2.05583944010913,2.16794459626573,1.7261543539329,0.512321413058201,1.41889337933151,4.13694816883942,1.29096936716765,1.35426486594342,1.88242339542605,2.45615535052061,1.34834090667051,3.97909060082173,3.53021929783703,3.19668562899521,0,0.199463657621632,0,2.90209238628584,1.70215567407342,0.622822248995575,0.75374599577023,1.0429658368404,2.6062661364614,1.81619850790011,1.10483290796269,1.58231193720442,0,0.212604299965044,0.628975936525128,0,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,6.1655941927969,0,3.34406609193516,7.8602152549833,7.81285696198135,0,1.30368906653436,0.473447805734733,0,0.111410456885174,0.589211814949674,1.10766947291811,1.08321545506006,0.128091319725675,0,0,0,0,1.03800594213442,0.535081656179426,0,0.113309342697566,3.44898444241729,2.40539211837841,1.26509846009751,0,0,0,0,0,0,0,0,11.0883708773603,19.2556940964125,11.7307767145067,0,0,0,0,0,0.144846518960824,0,0,0,0,0,2.03017567021455,0,0,0,0.522389211897802,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,2.34004265139238,0.891786973732369,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,7.88123040807709,15.3095578150257,8.08561128562415,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,1.72571360654893,3.52200940751366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.247127877893006,0.417687798021821,0,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0.0679697329768317,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,5.15295147884028,4.55539021265503,0,0.103432995861895,0,0,0,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@TUBA4A | |||
}} |
Latest revision as of 20:07, 24 September 2015
Short description: | p6@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TUBA4A_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -115bp_to_ENST00000392088, uc010zkz.1_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | A8MUB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.70e-26 | 98 |
blood island | 3.70e-26 | 98 |
bone marrow | 8.39e-26 | 76 |
bone element | 1.80e-23 | 82 |
hemolymphoid system | 4.40e-23 | 108 |
immune system | 7.24e-22 | 93 |
skeletal element | 7.63e-21 | 90 |
skeletal system | 3.76e-18 | 100 |
connective tissue | 4.52e-10 | 371 |
lateral plate mesoderm | 4.76e-09 | 203 |
musculoskeletal system | 1.71e-08 | 167 |