FFCP PHASE1:Hg19::chr9:139538920..139538940,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:139538920..139538940,-
|short_description=p@chr9:139538920..139538940,-
|description=CAGE_peak_at_chr9:139538920..139538940,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:139538920..139538940,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_at_chr9:139538920..139538940,- | |||
|id=chr9:139538920..139538940,- | |||
|ontology_enrichment_celltype=CL:0002139!4.83e-33!24;CL:0000115!1.65e-31!35;CL:0000071!2.84e-24!18;CL:0002546!2.84e-24!18;CL:0002078!6.70e-23!44;CL:0000213!2.09e-15!57;CL:0000215!2.09e-15!57;CL:1000413!3.15e-14!9;CL:0005020!2.50e-10!6;CL:0002138!2.50e-10!6;CL:0005022!2.50e-10!6;CL:0002544!4.82e-10!6;CL:0002543!2.38e-07!6;CL:0002057!4.00e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.03e-72;24!CL:0000115;1.30e-62;36!CL:0000071;1.45e-52;18!CL:0002078;4.23e-37;45!CL:1000413;1.39e-29;9!CL:0000213;2.19e-25;58!CL:0000215;2.19e-25;58!CL:0002138;6.78e-21;6!CL:0002544;2.53e-20;6!CL:0002543;6.64e-15;6!CL:0002618;1.16e-11;3!CL:0002144;1.24e-11;3!CL:0002188;1.75e-11;5!CL:1000746;3.39e-08;7!CL:1000612;3.39e-08;7!CL:0002262;3.61e-08;2!CL:1000398;3.61e-08;2!CL:0000076;7.11e-08;63!CL:0002545;1.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.61e-75,36;CL:0002139,3.48e-72,24;CL:0002078,1.62e-58,45;CL:0000071,1.36e-52,18;CL:0002546,1.36e-52,18;CL:0000213,1.35e-43,58;CL:0000215,1.35e-43,58;CL:1000413,1.40e-29,9;CL:0005020,6.26e-21,6;CL:0002138,6.26e-21,6;CL:0005022,6.26e-21,6;CL:0002544,2.67e-20,6;CL:0000222,7.86e-17,121;CL:0002543,6.39e-15,6;CL:0000076,7.68e-12,63;CL:0002618,1.08e-11,3;CL:0002144,1.20e-11,3;CL:0002188,2.12e-11,5;CL:0002262,3.62e-08,2;CL:1000398,3.62e-08,2;CL:1000746,3.87e-08,7;CL:1000612,3.87e-08,7;CL:0002545,1.08e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.45e-52;18!CL:0005022;6.78e-21;6!CL:0000222;4.30e-08;121!UBERON:0005062;6.39e-08;4!UBERON:0007284;6.39e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-25!115;UBERON:0001986!2.84e-24!18;UBERON:0004638!2.84e-24!18;UBERON:0004852!2.84e-24!18;UBERON:0000487!9.75e-19!22;UBERON:0006914!9.02e-16!25;UBERON:0004111!2.16e-15!241;UBERON:0000055!5.10e-15!69;UBERON:0003915!3.15e-14!9;UBERON:0004700!3.15e-14!9;UBERON:0001917!3.15e-14!9;UBERON:0000477!4.71e-14!286;UBERON:0000025!1.20e-12!194;UBERON:0002049!8.08e-12!79;UBERON:0007798!8.08e-12!79;UBERON:0004872!6.49e-11!84;UBERON:0001009!1.72e-10!113;UBERON:0004535!2.29e-10!110;UBERON:0003081!3.64e-10!216;UBERON:0001981!7.46e-10!60;UBERON:0007500!7.46e-10!60;UBERON:0004537!7.46e-10!60;UBERON:0006965!7.46e-10!60;UBERON:0001473!8.58e-10!8;UBERON:0004536!8.58e-10!8;UBERON:0006558!8.58e-10!8;UBERON:0002465!1.57e-09!10;UBERON:0000467!9.42e-09!625;UBERON:0000480!1.10e-08!626;UBERON:0000468!1.87e-08!659;UBERON:0003914!4.51e-08!118;UBERON:0002405!5.02e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.45e-52;18!UBERON:0001986;1.45e-52;18!UBERON:0004852;1.45e-52;18!UBERON:0000487;3.65e-42;22!UBERON:0006914;1.50e-36;25!UBERON:0003915;1.39e-29;9!UBERON:0004700;1.39e-29;9!UBERON:0001917;1.39e-29;9!UBERON:0000490;3.51e-24;33!UBERON:0001473;1.74e-15;8!UBERON:0004536;1.74e-15;8!UBERON:0006558;1.74e-15;8!UBERON:0000055;1.98e-15;65!UBERON:0002465;3.10e-12;10!UBERON:0010523;1.24e-11;3!UBERON:0001915;1.24e-11;3!UBERON:0001982;1.24e-11;3!UBERON:0007500;3.56e-11;56!UBERON:0001981;3.56e-11;56!UBERON:0004537;3.56e-11;56!UBERON:0003978;2.00e-10;3!UBERON:0000946;2.00e-10;3!UBERON:0002049;2.44e-10;75!UBERON:0007798;2.44e-10;75!UBERON:0001638;8.43e-10;9!UBERON:0003920;8.43e-10;9!UBERON:0004582;8.43e-10;9!UBERON:0003914;1.58e-09;74!UBERON:0001009;7.20e-09;112!UBERON:0004535;2.80e-08;109!UBERON:0000074;3.39e-08;7!UBERON:0001229;3.39e-08;7!UBERON:0001281;3.61e-08;2!UBERON:0003497;3.61e-08;2!UBERON:0003909;3.61e-08;2!UBERON:0003835;3.61e-08;2!UBERON:0000025;7.14e-08;93!UBERON:0000353;7.26e-08;15!UBERON:0005800;1.06e-07;2!UBERON:0002133;1.06e-07;2!UBERON:0001515;1.06e-07;2!UBERON:0002081;1.86e-07;2!UBERON:0002066;3.93e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.36e-52,18;UBERON:0001986,1.36e-52,18;UBERON:0004852,1.36e-52,18;UBERON:0000487,3.46e-42,22;UBERON:0006914,1.43e-36,25;UBERON:0000055,5.81e-33,68;UBERON:0003915,1.40e-29,9;UBERON:0004700,1.40e-29,9;UBERON:0001917,1.40e-29,9;UBERON:0002049,9.27e-28,78;UBERON:0007798,9.27e-28,78;UBERON:0004872,6.00e-23,83;UBERON:0007500,8.82e-23,59;UBERON:0001981,8.82e-23,59;UBERON:0004537,8.82e-23,59;UBERON:0006965,8.82e-23,59;UBERON:0004535,2.32e-22,109;UBERON:0001009,1.52e-21,112;UBERON:0003914,1.76e-18,117;UBERON:0001473,1.64e-15,8;UBERON:0004536,1.64e-15,8;UBERON:0006558,1.64e-15,8;UBERON:0004111,1.21e-14,240;UBERON:0002465,2.96e-12,10;UBERON:0000025,1.01e-11,192;UBERON:0010523,1.20e-11,3;UBERON:0001915,1.20e-11,3;UBERON:0001982,1.20e-11,3;UBERON:0003081,1.64e-11,203;UBERON:0003978,2.82e-10,3;UBERON:0009751,2.82e-10,3;UBERON:0000946,2.82e-10,3;UBERON:0002523,2.82e-10,3;UBERON:0005983,2.82e-10,3;UBERON:0002165,2.82e-10,3;UBERON:0002062,2.82e-10,3;UBERON:0007280,2.82e-10,3;UBERON:0001638,8.22e-10,9;UBERON:0003920,8.22e-10,9;UBERON:0004582,8.22e-10,9;UBERON:0001281,3.62e-08,2;UBERON:0003497,3.62e-08,2;UBERON:0003909,3.62e-08,2;UBERON:0003835,3.62e-08,2;UBERON:0010532,3.87e-08,7;UBERON:0000074,3.87e-08,7;UBERON:0001229,3.87e-08,7;UBERON:0001230,3.87e-08,7;UBERON:0003220,3.87e-08,7;UBERON:0005749,3.87e-08,7;UBERON:0004199,3.87e-08,7;UBERON:0004209,3.87e-08,7;UBERON:0004198,3.87e-08,7;UBERON:0000353,7.93e-08,15;UBERON:0005800,1.08e-07,2;UBERON:0002133,1.08e-07,2;UBERON:0001515,1.08e-07,2;UBERON:0002081,1.56e-07,2;UBERON:0010227,1.56e-07,2;UBERON:0000490,3.05e-07,148;UBERON:0000483,3.63e-07,306;UBERON:0002066,3.78e-07,5;UBERON:0005103,4.07e-07,8;UBERON:0000083,4.07e-07,8;UBERON:0009201,4.07e-07,8;UBERON:0006553,4.07e-07,8;UBERON:0003074,4.07e-07,8;UBERON:0003060,4.07e-07,8;UBERON:0000119,5.16e-07,309;UBERON:0003887,5.75e-07,12 | |||
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| ||
|short_description=p@chr9:139538920..139538940,- | |||
}} | }} |
Latest revision as of 00:20, 1 August 2015
Short description: | p@chr9:139538920..139538940, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139538920..139538940, - |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.61e-75 | 36 |
endothelial cell of vascular tree | 3.48e-72 | 24 |
meso-epithelial cell | 1.62e-58 | 45 |
blood vessel endothelial cell | 1.36e-52 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.36e-52 | 18 |
lining cell | 1.35e-43 | 58 |
barrier cell | 1.35e-43 | 58 |
endothelial cell of artery | 1.40e-29 | 9 |
lymphangioblast | 6.26e-21 | 6 |
endothelial cell of lymphatic vessel | 6.26e-21 | 6 |
vascular lymphangioblast | 6.26e-21 | 6 |
aortic endothelial cell | 2.67e-20 | 6 |
mesodermal cell | 7.86e-17 | 121 |
vein endothelial cell | 6.39e-15 | 6 |
squamous epithelial cell | 7.68e-12 | 63 |
endothelial cell of umbilical vein | 1.08e-11 | 3 |
capillary endothelial cell | 1.20e-11 | 3 |
glomerular endothelial cell | 2.12e-11 | 5 |
endothelial cell of sinusoid | 3.62e-08 | 2 |
endothelial cell of hepatic sinusoid | 3.62e-08 | 2 |
glomerular cell | 3.87e-08 | 7 |
kidney corpuscule cell | 3.87e-08 | 7 |
thoracic aorta endothelial cell | 1.08e-07 | 2 |