FFCP PHASE1:Hg19::chr3:10290124..10290223,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9797 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28988 | |||
|TSSclassifier=strong | |||
|UniProt=Q93075 | |||
|association_with_transcript=0bp_to_NM_014760,uc003bvf.2,uc003bvg.2,uc011atr.1_5end | |||
|cluster_id=chr3:10290124..10290223,+ | |||
|description=CAGE_peak_1_at_TATDN2_5end | |||
|id=chr3:10290124..10290223,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.50e-31!140;CL:0000037!4.66e-26!172;CL:0000566!4.66e-26!172;CL:0000988!1.31e-25!182;CL:0002087!4.07e-24!119;CL:0002032!1.08e-22!165;CL:0000837!1.08e-22!165;CL:0002031!1.13e-22!124;CL:0000766!9.44e-16!76;CL:0000134!1.11e-12!358;CL:0000557!1.70e-12!71;CL:0000838!1.90e-12!52;CL:0002320!3.99e-12!365;CL:0000542!8.70e-12!53;CL:0000051!8.70e-12!53;CL:0000219!9.21e-12!390;CL:0000763!1.97e-11!112;CL:0000049!1.97e-11!112;CL:0002009!2.84e-11!65;CL:0002057!3.32e-11!42;CL:0002194!3.44e-11!63;CL:0000576!3.44e-11!63;CL:0000040!3.44e-11!63;CL:0000559!3.44e-11!63;CL:0000860!9.81e-11!45;CL:0000839!1.09e-10!70;CL:0000084!5.63e-10!25;CL:0000827!5.63e-10!25;CL:0000791!1.17e-08!18;CL:0000789!1.17e-08!18;CL:0002420!1.17e-08!18;CL:0002419!1.17e-08!18;CL:0000790!1.17e-08!18;CL:0000048!2.22e-07!430;CL:0000723!2.66e-07!436;CL:0000034!6.21e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.65e-10;25!CL:0000860;8.42e-09;33!CL:0002057;8.42e-09;33!CL:0000791;1.15e-08;18!CL:0000789;1.15e-08;18!CL:0002419;1.15e-08;18!CL:0000576;4.35e-08;48!CL:0002087;6.11e-08;104!CL:0000542;1.90e-07;53!CL:0000738;3.26e-07;136!CL:0000473;7.77e-07;39!CL:0000234;7.77e-07;39!CL:0000766;8.95e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.87e-31,136;CL:0000037,2.01e-26,168;CL:0000988,6.92e-26,177;CL:0002087,1.09e-24,115;CL:0002031,3.55e-23,120;CL:0002032,5.03e-23,161;CL:0000837,5.03e-23,161;CL:0000766,2.28e-16,72;CL:0000557,5.29e-13,67;CL:0000134,1.42e-12,354;CL:0000838,1.90e-12,52;CL:0002320,5.12e-12,361;CL:0000542,8.70e-12,53;CL:0000051,8.70e-12,53;CL:0002009,9.02e-12,61;CL:0002194,1.06e-11,59;CL:0000576,1.06e-11,59;CL:0000040,1.06e-11,59;CL:0000559,1.06e-11,59;CL:0000763,1.10e-11,108;CL:0000049,1.10e-11,108;CL:0000219,1.21e-11,386;CL:0000860,3.32e-11,42;CL:0002057,3.32e-11,42;CL:0000839,4.10e-11,66;CL:0000084,5.63e-10,25;CL:0000827,5.63e-10,25;CL:0000473,8.50e-10,48;CL:0000234,8.50e-10,48;CL:0000791,1.17e-08,18;CL:0000789,1.17e-08,18;CL:0002420,1.17e-08,18;CL:0002419,1.17e-08,18;CL:0000790,1.17e-08,18;CL:0000048,3.04e-07,427;CL:0000723,3.63e-07,433;CL:0000034,8.42e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;1.15e-08;18!CL:0002057;1.86e-08;42!CL:0000051;1.90e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.96e-17!102;UBERON:0003061!4.96e-17!102;UBERON:0002193!1.61e-14!112;UBERON:0002371!3.46e-12!80;UBERON:0001474!7.58e-11!86;UBERON:0002384!2.50e-10!375;UBERON:0002405!1.95e-08!115;UBERON:0004765!6.21e-08!101;UBERON:0001434!6.21e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.70e-17,98;UBERON:0003061,1.70e-17,98;UBERON:0002193,7.38e-15,108;UBERON:0002371,1.30e-12,76;UBERON:0002405,2.24e-11,93;UBERON:0001474,3.51e-11,82;UBERON:0002384,3.18e-10,371;UBERON:0004765,2.61e-08,90;UBERON:0001434,3.57e-07,100;UBERON:0003081,6.57e-07,203 | |||
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| |||
|short_description=p1@TATDN2 | |||
}} |
Latest revision as of 08:43, 19 September 2015
Short description: | p1@TATDN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TATDN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_014760, uc003bvf.2, uc003bvg.2, uc011atr.1_5end |
EntrezGene: | TATDN2 |
HGNC: | 28988 |
UniProt: | Q93075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.70e-17 | 98 |
blood island | 1.70e-17 | 98 |
hemolymphoid system | 7.38e-15 | 108 |
bone marrow | 1.30e-12 | 76 |
immune system | 2.24e-11 | 93 |
bone element | 3.51e-11 | 82 |
connective tissue | 3.18e-10 | 371 |
skeletal element | 2.61e-08 | 90 |
skeletal system | 3.57e-07 | 100 |
lateral plate mesoderm | 6.57e-07 | 203 |