FFCP PHASE1:Mm9::chr11:76384845..76384866,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=109934|HGNC=|MCL_coexpression_id=1|UniProt=E9PUE7|association_with_transcript=0bp_to_ENSMUST00000108407_5end|description=CAGE_peak_4_at_Abr_5end|id=chr11:76384845..76384866,-|ontology_enrichment_celltype=CL:0000117!1.88e-11!23;CL:0000337!1.88e-11!23;CL:0000540!9.53e-07!33;CL:0000047!9.53e-07!33;CL:0000031!9.53e-07!33;CL:0000404!9.53e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-13,23;CL:0000337,2.78e-13,23;CL:0000540,6.98e-07,33;CL:0000047,6.98e-07,33;CL:0000031,6.98e-07,33;CL:0000404,6.98e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.50e-23!71;UBERON:0003075!1.50e-23!71;UBERON:0007284!1.50e-23!71;UBERON:0001049!4.71e-21!52;UBERON:0005068!4.71e-21!52;UBERON:0006241!4.71e-21!52;UBERON:0007135!4.71e-21!52;UBERON:0000073!6.28e-21!75;UBERON:0001016!6.28e-21!75;UBERON:0001017!6.48e-21!73;UBERON:0005743!6.48e-21!73;UBERON:0004121!3.50e-20!102;UBERON:0000924!3.50e-20!102;UBERON:0006601!3.50e-20!102;UBERON:0000033!3.62e-20!63;UBERON:0000955!3.95e-20!50;UBERON:0006238!3.95e-20!50;UBERON:0002616!1.81e-19!49;UBERON:0003056!7.27e-19!49;UBERON:0003080!1.87e-16!40;UBERON:0002780!8.50e-16!39;UBERON:0001890!8.50e-16!39;UBERON:0006240!8.50e-16!39;UBERON:0002020!1.43e-15!34;UBERON:0002791!8.71e-13!29;UBERON:0003528!8.71e-13!29;UBERON:0001893!8.71e-13!29;UBERON:0000153!5.89e-10!94;UBERON:0007811!5.39e-09!86;UBERON:0000956!1.11e-08!21;UBERON:0001869!1.11e-08!21;UBERON:0000203!1.11e-08!21;UBERON:0000489!1.31e-08!21;UBERON:0002021!2.12e-08!10;UBERON:0000411!2.12e-08!10;UBERON:0001950!2.12e-08!10;UBERON:0002619!1.47e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-26,54;UBERON:0002346,1.65e-25,64;UBERON:0003075,1.65e-25,64;UBERON:0007284,1.65e-25,64;UBERON:0001049,6.22e-25,52;UBERON:0005068,6.22e-25,52;UBERON:0006241,6.22e-25,52;UBERON:0007135,6.22e-25,52;UBERON:0001017,1.42e-23,73;UBERON:0001016,3.68e-23,75;UBERON:0003056,1.15e-22,49;UBERON:0000955,1.60e-21,47;UBERON:0006238,1.60e-21,47;UBERON:0002616,9.36e-21,46;UBERON:0004121,4.35e-20,95;UBERON:0000924,4.35e-20,95;UBERON:0006601,4.35e-20,95;UBERON:0003080,8.14e-20,40;UBERON:0010371,2.89e-19,73;UBERON:0002780,4.97e-19,39;UBERON:0001890,4.97e-19,39;UBERON:0006240,4.97e-19,39;UBERON:0002020,8.54e-19,34;UBERON:0003528,1.80e-15,29;UBERON:0002791,1.80e-15,29;UBERON:0001893,1.80e-15,29;UBERON:0010314,1.54e-14,92;UBERON:0000956,1.43e-10,21;UBERON:0001869,1.43e-10,21;UBERON:0000203,1.43e-10,21;UBERON:0002021,1.14e-09,10;UBERON:0000411,1.14e-09,10;UBERON:0001950,1.14e-09,10;UBERON:0000489,1.16e-09,21;UBERON:0002619,2.98e-09,17;UBERON:0002113,7.12e-07,14;UBERON:0003918,7.12e-07,14;UBERON:0011143,7.12e-07,14;UBERON:0005095,7.12e-07,14;UBERON:0007687,7.12e-07,14|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.872100625521786,0,0,1.39986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,9.5088736604011,8.99284664762456,12.0427966666174,0.677689064138264,0,1.3498495759221,2.96659908770092,2.8419204597844,2.09720077362883,3.07374644257244,1.8664130215526,2.43010688997043,2.3135745748652,20.2812198926701,16.3442720304194,2.44981598429908,2.01275489138296,2.75765635983006,17.6185409599022,26.8143409978894,26.4203237200739,6.72620067423989,5.39777097254217,8.85552729946492,18.9844439320939,20.8222165711722,20.3221669543157,15.0260578591571,17.3693450574906,8.01517617048792,0.605809546665472,2.11600368298999,0.869593466105033,0,0,0,0,0,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.91347103775248,0.258937883647172,10.3909497345377,1.21439728736295,1.52232739156071,1.15307748628029,1.65794904607885,1.52865319276416,2.13633205260448,0,0,0,0.647067399789637,0.441683036920787,0.969750506270444,0,9.9545470983926,11.7290155815535,0.510914110417183,0,0,0,27.861058929297,24.7050325522058,3.26701315493447,38.7628234028777,35.8001640262463,24.103413168909,25.9586020908412,2.74966282395854,4.10543003013307,17.1851475734899,1.89397670297827,2.34216797332867,2.29902104433473,1.80062129805349,2.41127708537144,3.6739709541717,3.84341160854549,1.96773621575431,8.2785078636485,4.52692785158969,3.9712276835242,2.99116911078713,1.31517439456545,2.22437799380478,0.348252166522167,0.61734640922383,2.38841120182192,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,31.5434922846191,6.79170441703277,0,0,3.19932375802851,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,5.12103332573321,2.74196430263349,4.50830942692322,3.25842124552503,3.87904974335251,2.52488951605147,1.64414996523069,4.72352473534727,2.82597710114475,2.59134044235781,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0,0,1.89491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,9.79030230873677,0,0,20.068823748474,19.2227166011213,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,1.13230612315533,0.404810701674894,0,0,25.7057053137446,0.709700426041343,1.95872164033981,0.81443479676788,3.79431282836832,1.32745138339963,2.42780636154981,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,1.80899805217755,0.727067458955011,0.356497378384721,0,0,0,3.40439605753788,1.98067203434441,2.58717367565509,1.92903331528433,1.77340233642274,1.96205699362278,3.29098041204242,2.74018454203139,0.469343416127421,0,1.7642271844397,0.16488625294148,0.968786560175433,0.784068024066026,0.358117032009409,0.656563598980245,0,12.0526446306831,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,3.00519193902079,0.609958401380546,0.86404272657441,0.418176592028937,0.655087691238533,0.269728692769641,0.661227645802687,0.523511883968059,0.129614973291793,0,2.25477175473676,2.24274819065968,0.992750942742586,0.972255941720238,0.387479470433193,1.35164900392623,1.5256441023948,1.8228613878153,1.15345278868282,0.966336483304024,1.72818003754719,0,2.43270258348197,1.43795340030758,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,0,1.55390167361845,0.538283139656854,0.671538465456314,0.19318959403219,0.93841237725591,3.29672923681077,0.643105137237198,2.50786052017682,52.5219213633872,50.1754507792823,53.2792827498639,59.2893479085722,39.7347861466973,33.9927253825365,43.8764625150674,38.727623477283,30.8136838109259,34.1721805756201,2.49089634202024,3.99024873401031,2.39027048055788,2.18796045361465,2.30574478890781,1.65459157605013,1.55572709461131,1.44224540067226,0.64183841918363,2.52697211763797,3.54871019846336,2.26351609663291,0.936415074698824,1.72867911493147,1.26358031702349,0.952587382566147,1.27472758539341,1.15745532278223,0.412085900803307,2.20798380201596,1.37147700954166,1.59728225543404,1.1921809497366,2.47088908274958,2.07040636913727,1.86152137361688,2.0122077016005,2.36762740294059,1.7654534799962,3.92799590160417,1.30498519936592,1.37906275325789,2.45538625901814,2.32405261778949,1.73615949883027,2.99772693525535,0.935726433781634,2.57845264857958,2.29545998482612,0.661774257358546,0.231867835620421|short_description=p4@Abr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109934 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9PUE7 | |||
|association_with_transcript=0bp_to_ENSMUST00000108407_5end | |||
|cluster_id=chr11:76384845..76384866,- | |||
|description=CAGE_peak_4_at_Abr_5end | |||
|id=chr11:76384845..76384866,- | |||
|ontology_enrichment_celltype=CL:0000117!1.88e-11!23;CL:0000337!1.88e-11!23;CL:0000540!9.53e-07!33;CL:0000047!9.53e-07!33;CL:0000031!9.53e-07!33;CL:0000404!9.53e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-13,23;CL:0000337,2.78e-13,23;CL:0000540,6.98e-07,33;CL:0000047,6.98e-07,33;CL:0000031,6.98e-07,33;CL:0000404,6.98e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.50e-23!71;UBERON:0003075!1.50e-23!71;UBERON:0007284!1.50e-23!71;UBERON:0001049!4.71e-21!52;UBERON:0005068!4.71e-21!52;UBERON:0006241!4.71e-21!52;UBERON:0007135!4.71e-21!52;UBERON:0000073!6.28e-21!75;UBERON:0001016!6.28e-21!75;UBERON:0001017!6.48e-21!73;UBERON:0005743!6.48e-21!73;UBERON:0004121!3.50e-20!102;UBERON:0000924!3.50e-20!102;UBERON:0006601!3.50e-20!102;UBERON:0000033!3.62e-20!63;UBERON:0000955!3.95e-20!50;UBERON:0006238!3.95e-20!50;UBERON:0002616!1.81e-19!49;UBERON:0003056!7.27e-19!49;UBERON:0003080!1.87e-16!40;UBERON:0002780!8.50e-16!39;UBERON:0001890!8.50e-16!39;UBERON:0006240!8.50e-16!39;UBERON:0002020!1.43e-15!34;UBERON:0002791!8.71e-13!29;UBERON:0003528!8.71e-13!29;UBERON:0001893!8.71e-13!29;UBERON:0000153!5.89e-10!94;UBERON:0007811!5.39e-09!86;UBERON:0000956!1.11e-08!21;UBERON:0001869!1.11e-08!21;UBERON:0000203!1.11e-08!21;UBERON:0000489!1.31e-08!21;UBERON:0002021!2.12e-08!10;UBERON:0000411!2.12e-08!10;UBERON:0001950!2.12e-08!10;UBERON:0002619!1.47e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-26,54;UBERON:0002346,1.65e-25,64;UBERON:0003075,1.65e-25,64;UBERON:0007284,1.65e-25,64;UBERON:0001049,6.22e-25,52;UBERON:0005068,6.22e-25,52;UBERON:0006241,6.22e-25,52;UBERON:0007135,6.22e-25,52;UBERON:0001017,1.42e-23,73;UBERON:0001016,3.68e-23,75;UBERON:0003056,1.15e-22,49;UBERON:0000955,1.60e-21,47;UBERON:0006238,1.60e-21,47;UBERON:0002616,9.36e-21,46;UBERON:0004121,4.35e-20,95;UBERON:0000924,4.35e-20,95;UBERON:0006601,4.35e-20,95;UBERON:0003080,8.14e-20,40;UBERON:0010371,2.89e-19,73;UBERON:0002780,4.97e-19,39;UBERON:0001890,4.97e-19,39;UBERON:0006240,4.97e-19,39;UBERON:0002020,8.54e-19,34;UBERON:0003528,1.80e-15,29;UBERON:0002791,1.80e-15,29;UBERON:0001893,1.80e-15,29;UBERON:0010314,1.54e-14,92;UBERON:0000956,1.43e-10,21;UBERON:0001869,1.43e-10,21;UBERON:0000203,1.43e-10,21;UBERON:0002021,1.14e-09,10;UBERON:0000411,1.14e-09,10;UBERON:0001950,1.14e-09,10;UBERON:0000489,1.16e-09,21;UBERON:0002619,2.98e-09,17;UBERON:0002113,7.12e-07,14;UBERON:0003918,7.12e-07,14;UBERON:0011143,7.12e-07,14;UBERON:0005095,7.12e-07,14;UBERON:0007687,7.12e-07,14 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.872100625521786,0,0,1.39986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,9.5088736604011,8.99284664762456,12.0427966666174,0.677689064138264,0,1.3498495759221,2.96659908770092,2.8419204597844,2.09720077362883,3.07374644257244,1.8664130215526,2.43010688997043,2.3135745748652,20.2812198926701,16.3442720304194,2.44981598429908,2.01275489138296,2.75765635983006,17.6185409599022,26.8143409978894,26.4203237200739,6.72620067423989,5.39777097254217,8.85552729946492,18.9844439320939,20.8222165711722,20.3221669543157,15.0260578591571,17.3693450574906,8.01517617048792,0.605809546665472,2.11600368298999,0.869593466105033,0,0,0,0,0,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.91347103775248,0.258937883647172,10.3909497345377,1.21439728736295,1.52232739156071,1.15307748628029,1.65794904607885,1.52865319276416,2.13633205260448,0,0,0,0.647067399789637,0.441683036920787,0.969750506270444,0,9.9545470983926,11.7290155815535,0.510914110417183,0,0,0,27.861058929297,24.7050325522058,3.26701315493447,38.7628234028777,35.8001640262463,24.103413168909,25.9586020908412,2.74966282395854,4.10543003013307,17.1851475734899,1.89397670297827,2.34216797332867,2.29902104433473,1.80062129805349,2.41127708537144,3.6739709541717,3.84341160854549,1.96773621575431,8.2785078636485,4.52692785158969,3.9712276835242,2.99116911078713,1.31517439456545,2.22437799380478,0.348252166522167,0.61734640922383,2.38841120182192,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,31.5434922846191,6.79170441703277,0,0,3.19932375802851,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,5.12103332573321,2.74196430263349,4.50830942692322,3.25842124552503,3.87904974335251,2.52488951605147,1.64414996523069,4.72352473534727,2.82597710114475,2.59134044235781,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0,0,1.89491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,9.79030230873677,0,0,20.068823748474,19.2227166011213,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,1.13230612315533,0.404810701674894,0,0,25.7057053137446,0.709700426041343,1.95872164033981,0.81443479676788,3.79431282836832,1.32745138339963,2.42780636154981,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,1.80899805217755,0.727067458955011,0.356497378384721,0,0,0,3.40439605753788,1.98067203434441,2.58717367565509,1.92903331528433,1.77340233642274,1.96205699362278,3.29098041204242,2.74018454203139,0.469343416127421,0,1.7642271844397,0.16488625294148,0.968786560175433,0.784068024066026,0.358117032009409,0.656563598980245,0,12.0526446306831,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,3.00519193902079,0.609958401380546,0.86404272657441,0.418176592028937,0.655087691238533,0.269728692769641,0.661227645802687,0.523511883968059,0.129614973291793,0,2.25477175473676,2.24274819065968,0.992750942742586,0.972255941720238,0.387479470433193,1.35164900392623,1.5256441023948,1.8228613878153,1.15345278868282,0.966336483304024,1.72818003754719,0,2.43270258348197,1.43795340030758,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,0,1.55390167361845,0.538283139656854,0.671538465456314,0.19318959403219,0.93841237725591,3.29672923681077,0.643105137237198,2.50786052017682,52.5219213633872,50.1754507792823,53.2792827498639,59.2893479085722,39.7347861466973,33.9927253825365,43.8764625150674,38.727623477283,30.8136838109259,34.1721805756201,2.49089634202024,3.99024873401031,2.39027048055788,2.18796045361465,2.30574478890781,1.65459157605013,1.55572709461131,1.44224540067226,0.64183841918363,2.52697211763797,3.54871019846336,2.26351609663291,0.936415074698824,1.72867911493147,1.26358031702349,0.952587382566147,1.27472758539341,1.15745532278223,0.412085900803307,2.20798380201596,1.37147700954166,1.59728225543404,1.1921809497366,2.47088908274958,2.07040636913727,1.86152137361688,2.0122077016005,2.36762740294059,1.7654534799962,3.92799590160417,1.30498519936592,1.37906275325789,2.45538625901814,2.32405261778949,1.73615949883027,2.99772693525535,0.935726433781634,2.57845264857958,2.29545998482612,0.661774257358546,0.231867835620421 | |||
|short_description=p4@Abr | |||
}} |
Latest revision as of 17:01, 25 September 2015
Short description: | p4@Abr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Abr_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000108407_5end |
EntrezGene: | Abr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.78e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.78e-13 | 23 |
neuron | 6.98e-07 | 33 |
neuronal stem cell | 6.98e-07 | 33 |
neuroblast | 6.98e-07 | 33 |
electrically signaling cell | 6.98e-07 | 33 |