FFCP PHASE1:Hg19::chr3:124606201..124606223,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6160 | |||
|TSSclassifier=strong | |||
|UniProt=P18084 | |||
|association_with_transcript=-57bp_to_ENST00000296181,NM_002213,uc003eho.2_5end | |||
|cluster_id=chr3:124606201..124606223,- | |||
|coexpression_cluster_id=C2716 | |||
|description=CAGE_peak_2_at_ITGB5_5end | |||
|id=chr3:124606201..124606223,- | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-30!180;CL:0000222!7.56e-16!119;CL:0000057!1.13e-15!75;CL:0000220!6.25e-15!246;CL:0002321!8.38e-15!248;CL:0000680!1.20e-12!57;CL:0000056!1.20e-12!57;CL:0000355!1.20e-12!57;CL:0000192!1.40e-12!42;CL:0000514!1.40e-12!42;CL:0000183!5.96e-12!59;CL:0000187!1.94e-11!54;CL:0000359!2.60e-11!32;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000548!1.24e-09!679;CL:0000004!1.24e-09!679;CL:0000255!1.24e-09!679;CL:0000012!6.39e-09!682;CL:0000136!2.53e-08!15;CL:0002371!1.59e-07!591;CL:0000144!2.99e-07!625;CL:0000066!4.17e-07!254;CL:0002334!7.46e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.55e-11;32!CL:0000134;2.21e-10;55!CL:0000192;2.98e-09;43!CL:0000048;9.14e-09;58!CL:0000723;4.51e-08;61!CL:0000136;9.25e-08;13!CL:0000349;1.22e-07;19!CL:0002320;1.38e-07;188!CL:0002334;5.18e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.88e-16,76;CL:0000222,3.66e-16,121;CL:0002321,1.40e-14,250;CL:0000680,9.85e-13,58;CL:0000056,9.85e-13,58;CL:0000355,9.85e-13,58;CL:0000192,1.32e-12,43;CL:0000514,1.32e-12,43;CL:0000187,1.65e-11,55;CL:0000359,1.73e-11,32;CL:0000393,1.01e-09,61;CL:0000211,1.01e-09,61;CL:0000136,1.90e-08,15;CL:0000349,1.28e-07,19;CL:0002334,5.96e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.34e-19!118;UBERON:0002100!4.94e-18!216;UBERON:0005256!4.59e-17!143;UBERON:0004872!8.30e-17!84;UBERON:0000468!7.51e-15!659;UBERON:0000475!6.69e-14!365;UBERON:0001981!1.03e-13!60;UBERON:0007500!1.03e-13!60;UBERON:0004537!1.03e-13!60;UBERON:0006965!1.03e-13!60;UBERON:0002049!1.16e-13!79;UBERON:0007798!1.16e-13!79;UBERON:0001637!1.18e-13!42;UBERON:0003509!1.18e-13!42;UBERON:0004572!1.18e-13!42;UBERON:0000490!1.32e-13!138;UBERON:0000486!1.52e-13!82;UBERON:0000914!2.02e-13!83;UBERON:0002329!2.02e-13!83;UBERON:0003077!2.02e-13!83;UBERON:0003059!2.02e-13!83;UBERON:0007282!2.02e-13!83;UBERON:0009618!2.02e-13!83;UBERON:0007285!2.02e-13!83;UBERON:0000055!6.23e-13!69;UBERON:0003104!2.13e-12!238;UBERON:0009142!2.13e-12!238;UBERON:0004290!2.13e-12!70;UBERON:0000119!5.23e-12!312;UBERON:0000483!6.74e-12!309;UBERON:0000467!7.99e-12!625;UBERON:0001009!1.19e-11!113;UBERON:0000480!1.22e-11!626;UBERON:0000926!1.33e-11!448;UBERON:0004120!1.33e-11!448;UBERON:0006603!1.33e-11!448;UBERON:0004573!1.67e-11!33;UBERON:0004571!1.67e-11!33;UBERON:0004535!1.69e-11!110;UBERON:0001134!4.87e-11!61;UBERON:0002036!4.87e-11!61;UBERON:0003082!4.87e-11!61;UBERON:0002385!5.61e-11!63;UBERON:0001015!5.61e-11!63;UBERON:0000383!5.61e-11!63;UBERON:0000477!3.42e-10!286;UBERON:0000481!1.98e-09!347;UBERON:0000947!2.86e-08!21;UBERON:0010191!2.86e-08!21;UBERON:0004111!3.69e-08!241;UBERON:0003102!9.28e-08!95;UBERON:0002199!1.13e-07!45;UBERON:0002416!1.13e-07!45;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0002050!1.34e-07!605;UBERON:0005423!1.34e-07!605;UBERON:0000922!1.76e-07!612;UBERON:0001013!2.55e-07!14;UBERON:0001048!3.32e-07!168;UBERON:0000025!4.28e-07!194;UBERON:0009569!6.42e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.14e-10;33!UBERON:0004571;1.14e-10;33!UBERON:0001637;3.85e-10;42!UBERON:0003509;3.85e-10;42!UBERON:0004572;3.85e-10;42!UBERON:0000947;2.26e-08;21!UBERON:0010191;2.26e-08;21!UBERON:0003914;1.24e-07;74!UBERON:0007500;1.33e-07;56!UBERON:0001981;1.33e-07;56!UBERON:0004537;1.33e-07;56!UBERON:0001013;2.40e-07;14!UBERON:0002384;3.30e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.35e-19,117;UBERON:0002100,7.24e-17,199;UBERON:0004872,1.33e-16,83;UBERON:0005256,1.63e-15,122;UBERON:0000490,2.90e-15,148;UBERON:0007503,9.63e-15,78;UBERON:0001637,7.10e-14,42;UBERON:0003509,7.10e-14,42;UBERON:0004572,7.10e-14,42;UBERON:0000486,1.12e-13,83;UBERON:0003104,1.26e-13,160;UBERON:0009142,1.26e-13,160;UBERON:0007500,1.35e-13,59;UBERON:0001981,1.35e-13,59;UBERON:0004537,1.35e-13,59;UBERON:0006965,1.35e-13,59;UBERON:0002049,3.16e-13,78;UBERON:0007798,3.16e-13,78;UBERON:0002329,1.40e-12,71;UBERON:0003059,1.40e-12,71;UBERON:0007282,1.40e-12,71;UBERON:0004290,1.40e-12,71;UBERON:0009618,1.40e-12,71;UBERON:0000055,1.66e-12,68;UBERON:0007524,1.78e-12,73;UBERON:0003077,3.50e-12,72;UBERON:0007285,3.50e-12,72;UBERON:0004573,1.10e-11,33;UBERON:0004571,1.10e-11,33;UBERON:0001134,3.41e-11,62;UBERON:0002036,3.41e-11,62;UBERON:0003082,3.41e-11,62;UBERON:0002385,3.90e-11,64;UBERON:0001015,3.90e-11,64;UBERON:0000383,3.90e-11,64;UBERON:0001009,4.22e-11,112;UBERON:0004535,6.03e-11,109;UBERON:0000119,1.29e-10,309;UBERON:0000483,1.65e-10,306;UBERON:0000947,2.16e-08,21;UBERON:0010191,2.16e-08,21;UBERON:0003102,3.59e-08,99;UBERON:0002199,5.98e-08,46;UBERON:0002416,5.98e-08,46;UBERON:0000926,9.53e-08,315;UBERON:0004120,9.53e-08,315;UBERON:0006603,9.53e-08,315;UBERON:0001013,2.00e-07,14;UBERON:0004923,3.96e-07,66;UBERON:0001048,6.91e-07,160;UBERON:0004111,8.97e-07,240 | |||
|phase1_expression=21.4380487539257,31.9009780597565,18.0421637242843,35.0256544235956,27.7115878544918,20.0637860543085,35.4619829435635,18.9515962028049,14.626395179191,6.88055022204225,7.6758128476967,16.6015442818931,20.3100573235909,4.20805600064159,6.2965501388304,12.101852636132,12.6565850885035,12.4152715365853,16.5897151588772,5.41732655537867,9.58803248847989,6.58254915103984,6.01095572975219,5.2012281527696,7.78364365487777,0,0,0,0,0,0.928896739896456,4.59710612239464,4.2168828628955,4.43704812200145,0,0,0,0,0,0,4.92614043327834,2.91504299417082,4.37878464978117,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,1.31940520074686,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,6.03630773733273,7.03244090139417,9.39741796199872,17.5468268722561,12.7464936685525,13.5198610998687,18.0054902011975,1.89069634328136,3.54767035940102,4.74307842742881,2.22664428346111,3.64295288292542,4.82019775619758,0.324547393654683,0.696518949197069,1.06366368415092,0,0,0,4.96906018416763,8.60234595106124,8.33137203858226,3.95715559346807,8.38998872419812,5.77747888074142,5.01587919688345,4.90991842421725,9.60568909254118,5.69025041699939,6.0424397566372,3.04108842287405,7.56592378399325,5.14728312484216,6.48113558305408,4.37568668591991,6.06229306090659,5.96840846561608,4.5994991239765,4.74632829784064,4.39684185432977,0,0,5.66922267785295,15.4061305025549,11.0168545148184,10.8575528266839,33.5598846276112,15.6054088167277,14.5776176037,5.33744978648525,19.98007142179,3.42332138939743,5.11900553864815,8.66348086501331,3.17850598054356,0.576175924479999,6.32667865951251,6.24320153660641,2.85235910772225,9.26581819421167,3.40560046066918,3.0755859429945,4.9157782345787,5.71631679513701,4.42203542322365,5.6829179646671,13.0680314301026,9.1488763833066,7.28129089550421,18.6840716872222,4.54507507675979,3.00284447692714,4.15596173226274,10.0964852802593,11.0335606487647,19.5309476578576,8.16711718752151,9.68704032719855,10.8914268297469,8.68920794754204,16.2049191885577,5.46178404963726,6.69865404118636,12.6559462305481,21.6033705268821,13.9334917380514,6.31084435610286,6.53554280360325,6.95078044320891,22.0105947360301,8.96693674225998,4.0694542154517,6.76412986071539,6.00041465299836,5.73609190778008,2.5614478287215,3.04818467139416,2.44007280025989,3.21349270547648,1.7662459561294,1.82488679537915,17.2094485562798,21.2269509603652,17.9575397758225,10.6804623447355,5.0531563716871,4.49565840151407,6.06904884281166,6.7483088367375,6.39705041847885,7.40790109914181,5.93176547777742,6.0674088672074,5.88664395376038,5.77120735419586,14.763109092493,2.80483547606892,11.9356463286106,14.7008711385542,3.80265104465493,6.87979051674338,8.27105869353966,0,1.59884970106048,9.77936518701596,5.81676512665715,7.86812272803337,4.52380375852339,1.48141512253647,2.93227474779292,4.15973914111831,12.9898207822746,2.66639931442677,14.3238606967702,1.15493158208859,0.925971025153221,1.71228737011138,7.11183958163348,6.86788929675898,4.18568910348575,8.19014927987332,5.94524649154913,4.68669169933885,4.53551746136921,6.66342957039216,7.25424033893071,5.52204483176528,14.9519244874432,0,0,0.207328115540772,0.144119953416961,0.37872730027914,2.41291998310242,5.72982638337417,5.86087236050235,10.2643467613623,5.96399457679276,4.50514586765876,3.71574362419752,6.16720963899484,4.79556075716608,2.2001485746285,12.6686281442622,14.3062578340753,14.370146793452,19.9453587438653,14.5610411675913,7.71622122786426,7.09245660116391,6.39413229638638,4.14636181608628,2.17048642156577,10.70212437815,8.46914079163711,4.97548728239564,9.50342247520115,13.5647719676814,18.3022026306062,15.0959216684906,0,2.51128545716063,2.10833939483032,11.9812427745791,14.9320516584348,5.70547620162874,14.6229119734255,10.0683398049688,15.7573647651108,0,0,0.215627574859517,0,1.52456774533478,1.30139853857622,0,2.01019518401218,0.637938751653163,0,0,0.414415513436035,3.80343624329334,4.00136416847742,5.69656549769445,9.77463049194793,5.35286966391485,7.56971592162886,11.5970000842786,12.3387900888365,27.2889004867182,21.729344971426,10.627609576567,8.11224341583494,4.43106433787223,2.74121620447837,2.05886054286514,0.206768026122887,0.215714200818617,0.106727557803444,8.48757200049526,14.9791895559447,16.6314661331324,10.4205279283886,27.1627692719871,23.5754479323782,12.9420540748258,20.4682899626681,27.5060205155569,48.977961926847,9.09837193435668,17.4010490806865,8.45909706942234,6.23105315020345,11.8534586029158,1.81289174387433,14.8374788024431,5.15653538041019,6.31479464905337,5.82691737621495,10.6210776117134,5.86559496779635,2.00239876471478,7.0591479225917,13.1525302187935,2.95544560900052,26.1586783363062,9.01496637965533,7.55705706357488,6.16909010761157,12.4635361270172,13.545623894081,3.8231440956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| |||
|short_description=p2@ITGB5 | |||
}} |
Latest revision as of 02:42, 20 September 2015
Short description: | p2@ITGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGB5_5end |
Coexpression cluster: | C2716_Osteoblast_leiomyoma_Preadipocyte_Adipocyte_mesenchymal_Smooth_Mesothelial |
Association with transcript: | -57bp_to_ENST00000296181, NM_002213, uc003eho.2_5end |
EntrezGene: | ITGB5 |
HGNC: | 6160 |
UniProt: | P18084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.88e-16 | 76 |
mesodermal cell | 3.66e-16 | 121 |
embryonic cell | 1.40e-14 | 250 |
muscle precursor cell | 9.85e-13 | 58 |
myoblast | 9.85e-13 | 58 |
multi-potent skeletal muscle stem cell | 9.85e-13 | 58 |
smooth muscle cell | 1.32e-12 | 43 |
smooth muscle myoblast | 1.32e-12 | 43 |
muscle cell | 1.65e-11 | 55 |
vascular associated smooth muscle cell | 1.73e-11 | 32 |
electrically responsive cell | 1.01e-09 | 61 |
electrically active cell | 1.01e-09 | 61 |
fat cell | 1.90e-08 | 15 |
extraembryonic cell | 1.28e-07 | 19 |
preadipocyte | 5.96e-07 | 12 |