FFCP PHASE1:Hg19::chr3:19189589..19189626,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18864 | |||
|TSSclassifier=strong | |||
|UniProt=Q96L42 | |||
|association_with_transcript=-319bp_to_ENST00000328405_5end | |||
|cluster_id=chr3:19189589..19189626,+ | |||
|coexpression_cluster_id=C2709 | |||
|description=CAGE_peak_5_at_KCNH8_5end | |||
|id=chr3:19189589..19189626,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.29e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.82e-18;2!CL:0000242;5.82e-18;2!CL:0000540;1.77e-13;6!CL:0000404;1.77e-13;6!CL:0000167;2.48e-10;1!CL:0000164;2.48e-10;1!CL:0000502;2.48e-10;1!CL:0000172;2.48e-10;1!CL:0000173;2.48e-10;1!CL:0002553;7.54e-10;1!CL:0002319;8.55e-08;25!CL:0000312;9.88e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.35e-18,2;CL:0000540,2.25e-13,6;CL:0000031,2.25e-13,6;CL:0000404,2.25e-13,6;CL:0000167,3.10e-10,1;CL:0000164,3.10e-10,1;CL:0000502,3.10e-10,1;CL:0000172,3.10e-10,1;CL:0000173,3.10e-10,1;CL:0002351,3.10e-10,1;CL:0000047,3.61e-10,8;CL:0002553,6.91e-10,1;CL:0002319,9.43e-08,25;CL:0000312,1.02e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.77e-13;6!CL:0002351;2.48e-10;1!UBERON:0005425;7.54e-10;1 | |||
|ontology_enrichment_disease=DOID:3095!3.34e-08!22;DOID:2994!3.34e-08!22;DOID:3119!2.91e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.48e-10;1!DOID:1357;2.48e-10;1!DOID:4430;2.48e-10;1!DOID:5409;7.90e-10;4!DOID:0050615;5.22e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.84e-10,1;DOID:1357,2.84e-10,1;DOID:4430,3.10e-10,1;DOID:5409,7.24e-10,4;DOID:0050615,5.06e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.90e-18!94;UBERON:0001016!5.90e-18!94;UBERON:0005743!4.33e-15!86;UBERON:0001017!4.97e-15!82;UBERON:0001894!1.18e-12!7;UBERON:0006222!1.18e-12!7;UBERON:0003296!4.18e-11!4;UBERON:0010133!4.18e-11!4;UBERON:0000955!6.66e-11!69;UBERON:0006238!6.66e-11!69;UBERON:0001049!2.10e-10!57;UBERON:0005068!2.10e-10!57;UBERON:0006241!2.10e-10!57;UBERON:0007135!2.10e-10!57;UBERON:0004121!2.17e-10!169;UBERON:0002780!3.78e-10!41;UBERON:0001890!3.78e-10!41;UBERON:0006240!3.78e-10!41;UBERON:0000924!6.29e-10!173;UBERON:0006601!6.29e-10!173;UBERON:0003080!8.09e-10!42;UBERON:0007023!3.63e-08!115;UBERON:0002616!9.74e-08!59;UBERON:0002021!1.82e-07!5;UBERON:0003056!2.05e-07!61;UBERON:0003075!8.24e-07!86;UBERON:0007284!8.24e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.57e-36;4!UBERON:0010133;2.57e-36;4!UBERON:0001894;6.88e-21;7!UBERON:0000007;3.13e-19;2!UBERON:0001905;6.42e-19;2!UBERON:0002757;6.42e-19;2!UBERON:0010134;6.42e-19;2!UBERON:0005408;6.42e-19;2!UBERON:0001899;6.42e-19;2!UBERON:0001764;2.48e-10;1!UBERON:0001825;2.48e-10;1!UBERON:0002784;6.34e-10;4!UBERON:0000941;7.54e-10;1!UBERON:0001785;7.54e-10;1!UBERON:0002464;7.54e-10;1!UBERON:0004904;7.54e-10;1!UBERON:0001021;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.16e-36,4;UBERON:0010133,2.16e-36,4;UBERON:0001894,6.23e-21,7;UBERON:0006222,6.23e-21,7;UBERON:0000007,3.13e-19,2;UBERON:0001905,5.37e-19,2;UBERON:0002757,5.37e-19,2;UBERON:0010134,5.37e-19,2;UBERON:0005408,5.37e-19,2;UBERON:0001899,5.37e-19,2;UBERON:0001764,2.84e-10,1;UBERON:0001825,2.84e-10,1;UBERON:0002784,5.81e-10,4;UBERON:0000941,8.99e-10,1;UBERON:0001785,8.99e-10,1;UBERON:0002464,8.99e-10,1;UBERON:0004904,8.99e-10,1;UBERON:0001021,8.99e-10,1;UBERON:0003902,8.99e-10,1;UBERON:0005425,8.99e-10,1;UBERON:0001016,6.06e-08,89;UBERON:0001017,2.92e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0.530119073285941,0.348581828608555,0.725627385107593,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,2.41320361269025,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0.432271251462318,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44677833618517,1.2378549293751,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,4.24046059875633,1.77213635993397,0,0,0,0,0.124192805882767,0.691743174681154,0.124980407962107,0,0,0,1.87333962322753,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.862598491173454,0,0.982886743728125,0,0,0,0,0,0.0788617450012534,1.60114149657094,0,0,0.128458450192919,0,0.159633859057151,0.615349092722265,0.504143392443436,0.484100767249525,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,4.82131652290458,4.37168838884471,7.28358725083958,11.6107717589162,0,0.115233987555779,0,0.135939465953663,0,0,0,0.078493092850514,0,0,1.82631744101899,0,0,0.0714765441766563,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0.485710993059139,0.701818390386317,4.3769170535501,0,2.59775988689608,0.109940516745429,4.37792246343353,0,0,2.82190377816914,0,4.00650130072764,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0.917458566809082,0.286679166302903,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,0.36757959813938,0.50141507858475,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@KCNH8 | |||
}} |
Latest revision as of 10:46, 17 September 2015
Short description: | p5@KCNH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCNH8_5end |
Coexpression cluster: | C2709_pituitary_pineal_retinoblastoma_argyrophil_carcinoid_cerebellum_iPS |
Association with transcript: | -319bp_to_ENST00000328405_5end |
EntrezGene: | KCNH8 |
HGNC: | 18864 |
UniProt: | Q96L42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.35e-18 | 2 |
neuron | 2.25e-13 | 6 |
neuroblast | 2.25e-13 | 6 |
electrically signaling cell | 2.25e-13 | 6 |
peptide hormone secreting cell | 3.10e-10 | 1 |
enteroendocrine cell | 3.10e-10 | 1 |
type D enteroendocrine cell | 3.10e-10 | 1 |
somatostatin secreting cell | 3.10e-10 | 1 |
pancreatic D cell | 3.10e-10 | 1 |
progenitor cell of endocrine pancreas | 3.10e-10 | 1 |
neuronal stem cell | 3.61e-10 | 8 |
lung fibroblast | 6.91e-10 | 1 |
neural cell | 9.43e-08 | 25 |
keratinocyte | 1.02e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.16e-36 | 4 |
neuroendocrine gland | 2.16e-36 | 4 |
diencephalon | 6.23e-21 | 7 |
future diencephalon | 6.23e-21 | 7 |
pituitary gland | 3.13e-19 | 2 |
pineal body | 5.37e-19 | 2 |
regional part of epithalamus | 5.37e-19 | 2 |
secretory circumventricular organ | 5.37e-19 | 2 |
circumventricular organ | 5.37e-19 | 2 |
epithalamus | 5.37e-19 | 2 |
maxillary sinus | 2.84e-10 | 1 |
paranasal sinus | 2.84e-10 | 1 |
regional part of diencephalon | 5.81e-10 | 4 |
cranial nerve II | 8.99e-10 | 1 |
cranial nerve | 8.99e-10 | 1 |
nerve trunk | 8.99e-10 | 1 |
nerve connecting eye with brain | 8.99e-10 | 1 |
nerve | 8.99e-10 | 1 |
retinal neural layer | 8.99e-10 | 1 |
presumptive neural retina | 8.99e-10 | 1 |
nervous system | 6.06e-08 | 89 |
central nervous system | 2.92e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.84e-10 | 1 |
maxillary sinus cancer | 2.84e-10 | 1 |
somatostatinoma | 3.10e-10 | 1 |
lung small cell carcinoma | 7.24e-10 | 4 |
respiratory system cancer | 5.06e-09 | 16 |