FFCP PHASE1:Hg19::chr3:52486215..52486252,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11943 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-208bp_to_ENST00000461086_5end | |||
|cluster_id=chr3:52486215..52486252,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_3_at_TNNC1_5end | |||
|id=chr3:52486215..52486252,- | |||
|ontology_enrichment_celltype=CL:0000188!4.30e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.59e-10;1!UBERON:0010226;8.53e-10;1!UBERON:0004874;1.10e-09;1!UBERON:0010227;1.42e-09;1!UBERON:0004140;1.42e-09;1!UBERON:0005062;1.92e-09;4!UBERON:0007284;1.92e-09;4!UBERON:0006603;3.34e-08;65 | |||
|ontology_enrichment_disease=DOID:114!2.69e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.60e-18;2!DOID:178;8.53e-10;1!DOID:326;8.53e-10;1!DOID:3978;8.53e-10;1!DOID:3394;8.53e-10;1!DOID:5844;8.53e-10;1!DOID:1287;1.52e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.45e-18,2;DOID:178,8.17e-10,1;DOID:326,8.17e-10,1;DOID:3978,8.17e-10,1;DOID:3394,8.17e-10,1;DOID:5844,8.17e-10,1;DOID:1287,1.49e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.06e-12!9;UBERON:0001557!1.27e-09!19;UBERON:0007023!1.91e-09!115;UBERON:0001630!2.26e-08!2;UBERON:0005090!2.26e-08!2;UBERON:0000341!9.19e-08!2;UBERON:0001829!1.37e-07!2;UBERON:0001004!1.49e-07!72;UBERON:0003103!1.79e-07!69;UBERON:0007100!4.12e-07!27;UBERON:0003127!4.82e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.48e-20;25!UBERON:0005090;2.24e-18;2!UBERON:0001630;2.24e-18;2!UBERON:0001134;4.89e-13;16!UBERON:0002036;4.89e-13;16!UBERON:0003978;2.69e-12;3!UBERON:0000946;2.69e-12;3!UBERON:0001723;3.77e-12;3!UBERON:0001033;3.77e-12;3!UBERON:0004151;4.46e-12;3!UBERON:0001389;3.74e-10;1!UBERON:0000026;3.74e-10;1!UBERON:0008784;3.74e-10;1!UBERON:0006058;3.74e-10;1!UBERON:0003663;3.74e-10;1!UBERON:0004256;3.74e-10;1!UBERON:0004708;3.74e-10;1!UBERON:0002101;3.74e-10;1!UBERON:0004709;3.74e-10;1!UBERON:0002529;3.74e-10;1!UBERON:0010538;3.74e-10;1!UBERON:0003661;3.74e-10;1!UBERON:0010890;3.74e-10;1!UBERON:0002471;3.74e-10;1!UBERON:0001383;3.74e-10;1!UBERON:0010758;3.74e-10;1!UBERON:0010707;3.74e-10;1!UBERON:0000978;3.74e-10;1!UBERON:0002103;3.74e-10;1!UBERON:0001665;3.74e-10;1!UBERON:0003823;3.74e-10;1!UBERON:0000154;3.74e-10;1!UBERON:0010709;3.74e-10;1!UBERON:0002426;5.79e-10;1!UBERON:0003831;5.79e-10;1!UBERON:0003898;5.79e-10;1!UBERON:0004830;5.79e-10;1!UBERON:0003830;5.79e-10;1!UBERON:0005175;5.79e-10;1!UBERON:0001774;5.79e-10;1!UBERON:0001103;5.79e-10;1!UBERON:0002146;6.59e-10;1!UBERON:0005623;6.59e-10;1!UBERON:0002084;8.53e-10;1!UBERON:0002135;8.53e-10;1!UBERON:0002082;8.53e-10;1!UBERON:0000989;1.10e-09;1!UBERON:0008811;1.10e-09;1!UBERON:0002079;1.42e-09;1!UBERON:0007029;2.17e-09;1!UBERON:0000948;2.22e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.99e-19,27;UBERON:0005090,2.24e-18,2;UBERON:0001630,2.24e-18,2;UBERON:0003978,2.85e-12,3;UBERON:0009751,2.85e-12,3;UBERON:0000946,2.85e-12,3;UBERON:0002523,2.85e-12,3;UBERON:0005983,2.85e-12,3;UBERON:0002165,2.85e-12,3;UBERON:0002062,2.85e-12,3;UBERON:0007280,2.85e-12,3;UBERON:0001723,3.57e-12,3;UBERON:0001033,3.57e-12,3;UBERON:0010056,3.57e-12,3;UBERON:0004151,4.22e-12,3;UBERON:0003103,8.30e-11,68;UBERON:0005418,3.74e-10,1;UBERON:0001389,3.74e-10,1;UBERON:0000026,3.74e-10,1;UBERON:0008784,3.74e-10,1;UBERON:0006058,3.74e-10,1;UBERON:0003663,3.74e-10,1;UBERON:0004256,3.74e-10,1;UBERON:0004708,3.74e-10,1;UBERON:0002101,3.74e-10,1;UBERON:0004709,3.74e-10,1;UBERON:0002529,3.74e-10,1;UBERON:0010538,3.74e-10,1;UBERON:0003661,3.74e-10,1;UBERON:0010890,3.74e-10,1;UBERON:0002471,3.74e-10,1;UBERON:0001383,3.74e-10,1;UBERON:0004357,3.74e-10,1;UBERON:0004347,3.74e-10,1;UBERON:0005420,3.74e-10,1;UBERON:0005732,3.74e-10,1;UBERON:0010758,3.74e-10,1;UBERON:0010707,3.74e-10,1;UBERON:0000978,3.74e-10,1;UBERON:0002103,3.74e-10,1;UBERON:0001665,3.74e-10,1;UBERON:0003823,3.74e-10,1;UBERON:0000154,3.74e-10,1;UBERON:0010709,3.74e-10,1;UBERON:0005733,3.74e-10,1;UBERON:0005730,3.74e-10,1;UBERON:0002426,5.79e-10,1;UBERON:0003831,5.79e-10,1;UBERON:0003898,5.79e-10,1;UBERON:0004830,5.79e-10,1;UBERON:0003830,5.79e-10,1;UBERON:0005175,5.79e-10,1;UBERON:0001774,5.79e-10,1;UBERON:0001103,5.79e-10,1;UBERON:0010084,5.79e-10,1;UBERON:0002146,6.31e-10,1;UBERON:0005623,6.31e-10,1;UBERON:0002084,8.91e-10,1;UBERON:0002082,8.91e-10,1;UBERON:0010226,8.91e-10,1;UBERON:0002135,9.70e-10,1;UBERON:0000989,1.06e-09,1;UBERON:0008811,1.06e-09,1;UBERON:0006258,1.06e-09,1;UBERON:0005876,1.06e-09,1;UBERON:0004874,1.06e-09,1;UBERON:0002079,1.25e-09,1;UBERON:0007029,2.08e-09,1;UBERON:0007023,1.08e-08,114;UBERON:0000948,1.43e-08,24;UBERON:0005498,1.43e-08,24;UBERON:0004140,1.43e-08,24;UBERON:0009881,1.43e-08,24;UBERON:0004141,1.43e-08,24;UBERON:0003084,1.43e-08,24;UBERON:0007005,1.43e-08,24;UBERON:0004139,1.43e-08,24;UBERON:0004291,1.43e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.614014698904518,0.827019434907183,0,0.435050081742686,0.511359764496605,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,8.82835412028668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2562765983567,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0.0882561266915003,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14421282798959,7.56229399238556,0,6.7890860169657,23.6074326475114,9.81954412744239,2.21705459206197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,6.62091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,3.96968942711435,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,55.6788799981589,12.4221996296059,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,13.6469748416628,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0,6.96693593270276,3.42233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,7.03922827210363,0,0,0,0.201273793591026,0 | |||
|short_description=p3@TNNC1 | |||
}} |
Latest revision as of 23:54, 18 September 2015
Short description: | p3@TNNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNNC1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -208bp_to_ENST00000461086_5end |
EntrezGene: | TNNC1 |
HGNC: | 11943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.45e-18 | 2 |
vascular disease | 8.17e-10 | 1 |
ischemia | 8.17e-10 | 1 |
extrinsic cardiomyopathy | 8.17e-10 | 1 |
myocardial ischemia | 8.17e-10 | 1 |
myocardial infarction | 8.17e-10 | 1 |
cardiovascular system disease | 1.49e-09 | 4 |