FFCP PHASE1:Hg19::chr4:174429652..174429665,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:174429652..174429665,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_at_chr4:174429652..174429665,+ | |||
|id=chr4:174429652..174429665,+ | |||
|ontology_enrichment_celltype=CL:0002569!3.02e-09!6;CL:0002195!8.98e-08!2;CL:0002571!8.98e-08!2;CL:1000306!1.33e-07!4;CL:0002547!1.33e-07!4;CL:0002588!1.50e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002569;2.72e-20;6!CL:0002195;4.48e-16;2!CL:0002571;4.48e-16;2!CL:0002588;1.54e-15;2!CL:0002568;1.71e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,2.40e-20,6;CL:0002195,4.65e-16,2;CL:0002571,4.65e-16,2;CL:0002588,1.54e-15,2;CL:0002568,1.32e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.58e-09;1!UBERON:0006242;4.35e-09;1!UBERON:0000358;5.49e-09;1!UBERON:0010227;9.37e-09;1!UBERON:0005062;1.20e-08;4!UBERON:0007284;1.20e-08;4!UBERON:0010226;1.71e-08;1 | |||
|ontology_enrichment_disease=DOID:114!7.63e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;4.00e-16;2!DOID:178;9.37e-09;1!DOID:326;9.37e-09;1!DOID:3978;9.37e-09;1!DOID:3394;9.37e-09;1!DOID:5844;9.37e-09;1!DOID:1287;1.65e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.18e-16,2;DOID:178,7.18e-09,1;DOID:326,7.18e-09,1;DOID:3978,7.18e-09,1;DOID:3394,7.18e-09,1;DOID:5844,7.18e-09,1;DOID:1287,1.48e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!2.95e-17!27;UBERON:0000948!2.63e-11!24;UBERON:0005498!2.63e-11!24;UBERON:0004140!2.63e-11!24;UBERON:0009881!2.63e-11!24;UBERON:0004141!2.63e-11!24;UBERON:0003084!2.63e-11!24;UBERON:0007005!2.63e-11!24;UBERON:0004139!2.63e-11!24;UBERON:0004291!2.63e-11!24;UBERON:0003914!2.93e-10!118;UBERON:0004872!7.68e-10!84;UBERON:0003422!3.02e-09!6;UBERON:0002331!2.89e-08!10;UBERON:0000358!2.89e-08!10;UBERON:0000307!2.89e-08!10;UBERON:0000091!2.89e-08!10;UBERON:0000087!2.89e-08!10;UBERON:0007806!2.89e-08!10;UBERON:0008780!2.89e-08!10;UBERON:0005728!2.89e-08!10;UBERON:0001009!5.15e-08!113;UBERON:0003103!8.46e-08!69;UBERON:0000415!1.33e-07!4;UBERON:0007240!1.33e-07!4;UBERON:0005742!1.33e-07!4;UBERON:0005734!1.33e-07!4;UBERON:0004664!1.33e-07!4;UBERON:0004663!1.33e-07!4;UBERON:0000481!4.26e-07!347;UBERON:0000025!8.47e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.00e-23;25!UBERON:0003422;2.72e-20;6!UBERON:0002331;9.99e-19;10!UBERON:0003104;1.99e-17;7!UBERON:0009142;1.99e-17;7!UBERON:0000948;9.18e-12;22!UBERON:0003978;3.03e-11;3!UBERON:0000946;3.03e-11;3!UBERON:0004151;1.14e-10;3!UBERON:0002135;3.31e-09;1!UBERON:0002146;6.40e-09;1!UBERON:0005623;6.40e-09;1!UBERON:0002079;9.37e-09;1!UBERON:0002084;1.71e-08;1!UBERON:0002082;1.71e-08;1!UBERON:0010260;8.60e-08;9!UBERON:0000478;1.07e-07;24!UBERON:0002066;9.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.92e-21,27;UBERON:0003422,2.40e-20,6;UBERON:0002331,8.95e-19,10;UBERON:0000358,8.95e-19,10;UBERON:0000307,8.95e-19,10;UBERON:0000091,8.95e-19,10;UBERON:0000087,8.95e-19,10;UBERON:0007010,8.95e-19,10;UBERON:0007806,8.95e-19,10;UBERON:0008780,8.95e-19,10;UBERON:0005728,8.95e-19,10;UBERON:0003978,2.96e-11,3;UBERON:0009751,2.96e-11,3;UBERON:0000946,2.96e-11,3;UBERON:0002523,2.96e-11,3;UBERON:0005983,2.96e-11,3;UBERON:0002165,2.96e-11,3;UBERON:0002062,2.96e-11,3;UBERON:0007280,2.96e-11,3;UBERON:0000948,9.00e-11,24;UBERON:0005498,9.00e-11,24;UBERON:0004140,9.00e-11,24;UBERON:0009881,9.00e-11,24;UBERON:0004141,9.00e-11,24;UBERON:0003084,9.00e-11,24;UBERON:0007005,9.00e-11,24;UBERON:0004139,9.00e-11,24;UBERON:0004291,9.00e-11,24;UBERON:0004151,1.03e-10,3;UBERON:0001009,2.47e-10,112;UBERON:0004797,3.28e-10,7;UBERON:0003914,8.58e-10,117;UBERON:0002135,3.31e-09,1;UBERON:0002146,6.16e-09,1;UBERON:0005623,6.16e-09,1;UBERON:0004872,7.73e-09,83;UBERON:0002079,8.36e-09,1;UBERON:0002084,1.65e-08,1;UBERON:0002082,1.65e-08,1;UBERON:0010226,1.65e-08,1;UBERON:0010260,8.10e-08,9;UBERON:0000478,1.03e-07,24;UBERON:0003103,1.45e-07,68;UBERON:0002066,9.73e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0,0.573673241497627,1.06400514659507,0,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02003336744879,0.625592599359821,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,1.93907573636667,0,0,0,0,0,0,0,5.7191197463259,8.68194568626309,4.11620168390384,0,2.48774364119782,3.16780749173372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,2.46426864140871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69017361519345,2.58140433967293,1.27723753317057,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,7.89776080535604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1712960508902,3.43740636017525,0,2.99518500748487,7.2968428183217,2.90122894674434,10.6149886529027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9853637891385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848915739187391,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p@chr4:174429652..174429665,+ | |||
}} |
Latest revision as of 03:25, 30 July 2015
Short description: | p@chr4:174429652..174429665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:174429652..174429665, + |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 2.40e-20 | 6 |
hepatic stem cell | 4.65e-16 | 2 |
hepatic mesenchymal stem cell | 4.65e-16 | 2 |
smooth muscle cell of the umbilical vein | 1.54e-15 | 2 |
mesenchymal stem cell of Wharton's jelly | 1.32e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.18e-16 | 2 |
vascular disease | 7.18e-09 | 1 |
ischemia | 7.18e-09 | 1 |
extrinsic cardiomyopathy | 7.18e-09 | 1 |
myocardial ischemia | 7.18e-09 | 1 |
myocardial infarction | 7.18e-09 | 1 |
cardiovascular system disease | 1.48e-08 | 4 |