FFCP PHASE1:Mm9::chr15:78778320..78778327,+: Difference between revisions
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{{FFCP|EntrezGene=110253|HGNC=|MCL_coexpression_id=22|UniProt=Q99KW3|association_with_transcript=166bp_to_ENSMUST00000089366,ENSMUST00000109689,ENSMUST00000109690,ENSMUST00000140228,NM_001039155,NM_001039156,NM_138579,uc007wrx.1,uc007wry.1,uc007wrz.1_5end|description=CAGE_peak_6_at_Triobp_5end|id=chr15:78778320..78778327,+|ontology_enrichment_celltype=CL:0000117!5.99e-10!23;CL:0000337!5.99e-10!23;CL:0000540!4.52e-08!33;CL:0000047!4.52e-08!33;CL:0000031!4.52e-08!33;CL:0000404!4.52e-08!33;CL:0002609!6.42e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-26,23;CL:0000337,1.28e-26,23;CL:0002609,2.82e-26,6;CL:0002613,9.63e-20,3;CL:0000540,2.97e-18,33;CL:0000047,2.97e-18,33;CL:0000031,2.97e-18,33;CL:0000404,2.97e-18,33;CL:0000393,2.77e-15,39;CL:0000211,2.77e-15,39;CL:0002319,9.20e-14,43;CL:0000221,2.00e-13,44;CL:0000133,2.00e-13,44;CL:0000120,1.21e-09,3;CL:0002608,2.17e-09,3;CL:0002321,5.19e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.28e-13!71;UBERON:0003075!7.28e-13!71;UBERON:0007284!7.28e-13!71;UBERON:0003056!1.09e-11!49;UBERON:0002020!6.04e-11!34;UBERON:0000033!9.83e-11!63;UBERON:0001049!1.52e-09!52;UBERON:0005068!1.52e-09!52;UBERON:0006241!1.52e-09!52;UBERON:0007135!1.52e-09!52;UBERON:0000073!4.86e-09!75;UBERON:0001016!4.86e-09!75;UBERON:0001017!5.56e-09!73;UBERON:0005743!5.56e-09!73;UBERON:0004121!6.37e-09!102;UBERON:0000924!6.37e-09!102;UBERON:0006601!6.37e-09!102;UBERON:0002791!9.64e-09!29;UBERON:0003528!9.64e-09!29;UBERON:0001893!9.64e-09!29;UBERON:0000955!4.96e-08!50;UBERON:0006238!4.96e-08!50;UBERON:0002616!1.40e-07!49;UBERON:0000956!1.60e-07!21;UBERON:0001869!1.60e-07!21;UBERON:0000203!1.60e-07!21;UBERON:0003080!1.88e-07!40;UBERON:0002780!3.99e-07!39;UBERON:0001890!3.99e-07!39;UBERON:0006240!3.99e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.37e-30,29;UBERON:0002791,6.37e-30,29;UBERON:0001893,6.37e-30,29;UBERON:0002020,2.36e-25,34;UBERON:0000956,3.11e-23,21;UBERON:0001869,3.11e-23,21;UBERON:0000203,3.11e-23,21;UBERON:0002780,5.95e-22,39;UBERON:0001890,5.95e-22,39;UBERON:0006240,5.95e-22,39;UBERON:0003080,2.26e-21,40;UBERON:0002616,2.00e-18,46;UBERON:0000955,5.24e-18,47;UBERON:0006238,5.24e-18,47;UBERON:0003056,3.20e-17,49;UBERON:0001049,3.73e-16,52;UBERON:0005068,3.73e-16,52;UBERON:0006241,3.73e-16,52;UBERON:0007135,3.73e-16,52;UBERON:0001017,1.24e-15,73;UBERON:0000073,1.65e-15,54;UBERON:0001016,3.51e-15,75;UBERON:0002619,5.99e-13,17;UBERON:0002346,7.00e-13,64;UBERON:0003075,7.00e-13,64;UBERON:0007284,7.00e-13,64;UBERON:0000369,4.27e-12,5;UBERON:0002435,4.27e-12,5;UBERON:0000204,4.27e-12,5;UBERON:0010082,4.27e-12,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010371,3.98e-11,73;UBERON:0001954,6.66e-09,7;UBERON:0003022,6.66e-09,7;UBERON:0002421,6.66e-09,7;UBERON:0000349,6.66e-09,7;UBERON:0002600,6.66e-09,7;UBERON:0010314,1.55e-08,92;UBERON:0002420,9.27e-08,8;UBERON:0007245,9.27e-08,8;UBERON:0010009,9.27e-08,8;UBERON:0010011,9.27e-08,8;UBERON:0000454,9.27e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0,0,0,0,0,1.55534418462716,1.4850653216486,1.68259969081106,0.285650984403804,0.441737081903227,0.61245399607477,1.24599112323707,1.83843757322004,0,0.127687338085188,0,1.84640802822271,2.10421580285542,1.04182674111352,0,0,0,0.589257170947335,0,0.931997229126503,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.149790639404823,0,0.879580464790051,0,0.511430914660661,0.41557608911912,0,0,0,0,0,0.130120442962704,0.459804208866946,0.900310649026746,0.30140963567143,0.408218994907967,0.512454881139399,0.468508622798644,0.517406741478031,0.215567992932842,0,0.351902248327898,0.43839146485515,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,2.26390147234426,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.859265911718438,0,0,0,0,0.453142408984205,1.03552062350364,0.415149390336707,0,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0.384150914429216,0.402048282689293,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.679020569229309,0,0.474540072496697,0.788035859004508,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421|short_description=p6@Triobp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110253 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KW3 | |||
|association_with_transcript=166bp_to_ENSMUST00000089366,ENSMUST00000109689,ENSMUST00000109690,ENSMUST00000140228,NM_001039155,NM_001039156,NM_138579,uc007wrx.1,uc007wry.1,uc007wrz.1_5end | |||
|cluster_id=chr15:78778320..78778327,+ | |||
|description=CAGE_peak_6_at_Triobp_5end | |||
|id=chr15:78778320..78778327,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.99e-10!23;CL:0000337!5.99e-10!23;CL:0000540!4.52e-08!33;CL:0000047!4.52e-08!33;CL:0000031!4.52e-08!33;CL:0000404!4.52e-08!33;CL:0002609!6.42e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-26,23;CL:0000337,1.28e-26,23;CL:0002609,2.82e-26,6;CL:0002613,9.63e-20,3;CL:0000540,2.97e-18,33;CL:0000047,2.97e-18,33;CL:0000031,2.97e-18,33;CL:0000404,2.97e-18,33;CL:0000393,2.77e-15,39;CL:0000211,2.77e-15,39;CL:0002319,9.20e-14,43;CL:0000221,2.00e-13,44;CL:0000133,2.00e-13,44;CL:0000120,1.21e-09,3;CL:0002608,2.17e-09,3;CL:0002321,5.19e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.28e-13!71;UBERON:0003075!7.28e-13!71;UBERON:0007284!7.28e-13!71;UBERON:0003056!1.09e-11!49;UBERON:0002020!6.04e-11!34;UBERON:0000033!9.83e-11!63;UBERON:0001049!1.52e-09!52;UBERON:0005068!1.52e-09!52;UBERON:0006241!1.52e-09!52;UBERON:0007135!1.52e-09!52;UBERON:0000073!4.86e-09!75;UBERON:0001016!4.86e-09!75;UBERON:0001017!5.56e-09!73;UBERON:0005743!5.56e-09!73;UBERON:0004121!6.37e-09!102;UBERON:0000924!6.37e-09!102;UBERON:0006601!6.37e-09!102;UBERON:0002791!9.64e-09!29;UBERON:0003528!9.64e-09!29;UBERON:0001893!9.64e-09!29;UBERON:0000955!4.96e-08!50;UBERON:0006238!4.96e-08!50;UBERON:0002616!1.40e-07!49;UBERON:0000956!1.60e-07!21;UBERON:0001869!1.60e-07!21;UBERON:0000203!1.60e-07!21;UBERON:0003080!1.88e-07!40;UBERON:0002780!3.99e-07!39;UBERON:0001890!3.99e-07!39;UBERON:0006240!3.99e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.37e-30,29;UBERON:0002791,6.37e-30,29;UBERON:0001893,6.37e-30,29;UBERON:0002020,2.36e-25,34;UBERON:0000956,3.11e-23,21;UBERON:0001869,3.11e-23,21;UBERON:0000203,3.11e-23,21;UBERON:0002780,5.95e-22,39;UBERON:0001890,5.95e-22,39;UBERON:0006240,5.95e-22,39;UBERON:0003080,2.26e-21,40;UBERON:0002616,2.00e-18,46;UBERON:0000955,5.24e-18,47;UBERON:0006238,5.24e-18,47;UBERON:0003056,3.20e-17,49;UBERON:0001049,3.73e-16,52;UBERON:0005068,3.73e-16,52;UBERON:0006241,3.73e-16,52;UBERON:0007135,3.73e-16,52;UBERON:0001017,1.24e-15,73;UBERON:0000073,1.65e-15,54;UBERON:0001016,3.51e-15,75;UBERON:0002619,5.99e-13,17;UBERON:0002346,7.00e-13,64;UBERON:0003075,7.00e-13,64;UBERON:0007284,7.00e-13,64;UBERON:0000369,4.27e-12,5;UBERON:0002435,4.27e-12,5;UBERON:0000204,4.27e-12,5;UBERON:0010082,4.27e-12,5;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010371,3.98e-11,73;UBERON:0001954,6.66e-09,7;UBERON:0003022,6.66e-09,7;UBERON:0002421,6.66e-09,7;UBERON:0000349,6.66e-09,7;UBERON:0002600,6.66e-09,7;UBERON:0010314,1.55e-08,92;UBERON:0002420,9.27e-08,8;UBERON:0007245,9.27e-08,8;UBERON:0010009,9.27e-08,8;UBERON:0010011,9.27e-08,8;UBERON:0000454,9.27e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0,0,0,0,0,1.55534418462716,1.4850653216486,1.68259969081106,0.285650984403804,0.441737081903227,0.61245399607477,1.24599112323707,1.83843757322004,0,0.127687338085188,0,1.84640802822271,2.10421580285542,1.04182674111352,0,0,0,0.589257170947335,0,0.931997229126503,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.149790639404823,0,0.879580464790051,0,0.511430914660661,0.41557608911912,0,0,0,0,0,0.130120442962704,0.459804208866946,0.900310649026746,0.30140963567143,0.408218994907967,0.512454881139399,0.468508622798644,0.517406741478031,0.215567992932842,0,0.351902248327898,0.43839146485515,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,2.26390147234426,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.631016438832513,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.14579102687879,0.859265911718438,0,0,0,0,0.453142408984205,1.03552062350364,0.415149390336707,0,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.618105171716683,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0.384150914429216,0.402048282689293,0,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.679020569229309,0,0.474540072496697,0.788035859004508,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Triobp | |||
}} |
Latest revision as of 02:34, 27 September 2015
Short description: | p6@Triobp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Triobp_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 166bp_to_ENSMUST00000089366, ENSMUST00000109689, ENSMUST00000109690, ENSMUST00000140228, NM_001039155, NM_001039156, NM_138579, uc007wrx.1, uc007wry.1, uc007wrz.1_5end |
EntrezGene: | Triobp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.28e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-26 | 23 |
neuron of cerebral cortex | 2.82e-26 | 6 |
striatum neuron | 9.63e-20 | 3 |
neuron | 2.97e-18 | 33 |
neuronal stem cell | 2.97e-18 | 33 |
neuroblast | 2.97e-18 | 33 |
electrically signaling cell | 2.97e-18 | 33 |
electrically responsive cell | 2.77e-15 | 39 |
electrically active cell | 2.77e-15 | 39 |
neural cell | 9.20e-14 | 43 |
ectodermal cell | 2.00e-13 | 44 |
neurectodermal cell | 2.00e-13 | 44 |
granule cell | 1.21e-09 | 3 |
hippocampal neuron | 2.17e-09 | 3 |
embryonic cell | 5.19e-08 | 70 |